RNA–Protein interactions for RNA: ENST00000564634.5

CYLD-208, Transcript of CYLD lysine 63 deubiquitinase, humanhuman

TSL 3

Gene CYLD, Length 539 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CYLD-208ENST00000564634 DZANK1Q9NVP4 752 aa28.03■■■□□ 2.08
CYLD-208ENST00000564634 LIMD1Q9UGP4 676 aa28.03■■■□□ 2.08
CYLD-208ENST00000564634 NUBP1P53384 320 aa28.02■■■□□ 2.08
CYLD-208ENST00000564634 POLGP54098 1239 aaPredicted RBP28.02■■■□□ 2.08
CYLD-208ENST00000564634 ASCL5Q7RTU5 278 aa28.02■■■□□ 2.08
CYLD-208ENST00000564634 BCL7CQ8WUZ0 217 aaPredicted RBP28.02■■■□□ 2.08
CYLD-208ENST00000564634 GCOM2Q9BZD3 368 aaPredicted RBP28.02■■■□□ 2.08
CYLD-208ENST00000564634 FOXD4L1Q9NU39 408 aa28.02■■■□□ 2.08
CYLD-208ENST00000564634 SUCLA2Q9P2R7 463 aaPredicted RBP28.02■■■□□ 2.08
CYLD-208ENST00000564634 INPP5FQ9Y2H2 1132 aa28.02■■■□□ 2.08
CYLD-208ENST00000564634 STK24Q9Y6E0 443 aa28.02■■■□□ 2.08
CYLD-208ENST00000564634 GAS2O43903 313 aaKnown RBP28.01■■■□□ 2.07
CYLD-208ENST00000564634 SYT1P21579 422 aa28.01■■■□□ 2.07
CYLD-208ENST00000564634 RPA1P27694 616 aa28.01■■■□□ 2.07
CYLD-208ENST00000564634 PHKA2P46019 1235 aa28.01■■■□□ 2.07
CYLD-208ENST00000564634 TWF2Q6IBS0 349 aaKnown RBP28.01■■■□□ 2.07
CYLD-208ENST00000564634 MFSD1Q9H3U5 465 aa28.01■■■□□ 2.07
CYLD-208ENST00000564634 LRWD1Q9UFC0 647 aa28.01■■■□□ 2.07
CYLD-208ENST00000564634 DENND4AQ7Z401 1863 aa28■■■□□ 2.07
CYLD-208ENST00000564634 A0A087WZ62 844 aa28■■■□□ 2.07
CYLD-208ENST00000564634 MEIS3P2A8K0S8 358 aa28■■■□□ 2.07
CYLD-208ENST00000564634 MED24O75448 989 aa28■■■□□ 2.07
CYLD-208ENST00000564634 MUTP22033 750 aa28■■■□□ 2.07
CYLD-208ENST00000564634 ATP2C1P98194 919 aaPredicted RBP28■■■□□ 2.07
CYLD-208ENST00000564634 HAUS3Q68CZ6 603 aa28■■■□□ 2.07
CYLD-208ENST00000564634 TMC5Q6UXY8 1006 aa28■■■□□ 2.07
CYLD-208ENST00000564634 DTHD1Q6ZMT9 781 aa28■■■□□ 2.07
CYLD-208ENST00000564634 ZDHHC14Q8IZN3 488 aa28■■■□□ 2.07
CYLD-208ENST00000564634 IGSF22Q8N9C0 903 aa28■■■□□ 2.07
CYLD-208ENST00000564634 FDXACB1Q9BRP7 624 aaPredicted RBP28■■■□□ 2.07
CYLD-208ENST00000564634 GBP3Q9H0R5 595 aa28■■■□□ 2.07
CYLD-208ENST00000564634 TBC1D13Q9NVG8 400 aa28■■■□□ 2.07
CYLD-208ENST00000564634 PIN4Q9Y237 131 aaKnown RBP28■■■□□ 2.07
CYLD-208ENST00000564634 ARID2Q68CP9 1835 aa27.99■■■□□ 2.07
CYLD-208ENST00000564634 CTSAP10619 480 aa27.99■■■□□ 2.07
CYLD-208ENST00000564634 ATAT1Q5SQI0 421 aa27.99■■■□□ 2.07
CYLD-208ENST00000564634 ASTLQ6HA08 431 aaPredicted RBP27.99■■■□□ 2.07
CYLD-208ENST00000564634 ZNF410Q86VK4 478 aa27.99■■■□□ 2.07
CYLD-208ENST00000564634 PIGOQ8TEQ8 1089 aa27.99■■■□□ 2.07
CYLD-208ENST00000564634 TCP11Q8WWU5 503 aa27.99■■■□□ 2.07
CYLD-208ENST00000564634 IGSF21Q96ID5 467 aa27.99■■■□□ 2.07
CYLD-208ENST00000564634 CCDC43Q96MW1 224 aaKnown RBP27.99■■■□□ 2.07
CYLD-208ENST00000564634 NACC1Q96RE7 527 aa27.99■■■□□ 2.07
CYLD-208ENST00000564634 NRDE2Q9H7Z3 1164 aa27.99■■■□□ 2.07
CYLD-208ENST00000564634 PROB1E7EW31 1015 aa27.98■■■□□ 2.07
CYLD-208ENST00000564634 SFPQP23246 707 aaKnown RBP eCLIP27.98■■■□□ 2.07
CYLD-208ENST00000564634 RARRES1P49788 294 aa27.98■■■□□ 2.07
CYLD-208ENST00000564634 EMC2Q15006 297 aa27.98■■■□□ 2.07
CYLD-208ENST00000564634 GLB1LQ6UWU2 654 aa27.98■■■□□ 2.07
CYLD-208ENST00000564634 DDX53Q86TM3 631 aaKnown RBP27.98■■■□□ 2.07
CYLD-208ENST00000564634 FERMT3Q86UX7 667 aa27.98■■■□□ 2.07
CYLD-208ENST00000564634 CABP7Q86V35 215 aa27.98■■■□□ 2.07
CYLD-208ENST00000564634 RHPN2Q8IUC4 686 aa27.98■■■□□ 2.07
CYLD-208ENST00000564634 SLC22A17Q8WUG5 538 aa27.98■■■□□ 2.07
CYLD-208ENST00000564634 MTRQ99707 1265 aa27.98■■■□□ 2.07
CYLD-208ENST00000564634 CHST12Q9NRB3 414 aa27.98■■■□□ 2.07
CYLD-208ENST00000564634 DNAJB4Q9UDY4 337 aa27.98■■■□□ 2.07
CYLD-208ENST00000564634 PRR23AA6NEV1 266 aa27.97■■■□□ 2.07
CYLD-208ENST00000564634 SPDYE4A6NLX3 237 aa27.97■■■□□ 2.07
CYLD-208ENST00000564634 DGAT1O75907 488 aa27.97■■■□□ 2.07
CYLD-208ENST00000564634 CCT6AP40227 531 aaKnown RBP27.97■■■□□ 2.07
CYLD-208ENST00000564634 RNASELQ05823 741 aaKnown RBP27.97■■■□□ 2.07
CYLD-208ENST00000564634 NOMO2Q5JPE7 1267 aa27.97■■■□□ 2.07
CYLD-208ENST00000564634 ARL6IP4Q66PJ3 421 aaKnown RBP27.97■■■□□ 2.07
CYLD-208ENST00000564634 PSPC1Q8WXF1 523 aaKnown RBP27.97■■■□□ 2.07
CYLD-208ENST00000564634 TMEM143Q96AN5 459 aa27.97■■■□□ 2.07
CYLD-208ENST00000564634 VN1R3Q9BXE9 311 aa27.97■■■□□ 2.07
CYLD-208ENST00000564634 FAM105AQ9NUU6 356 aa27.97■■■□□ 2.07
CYLD-208ENST00000564634 ASAP2O43150 1006 aa27.96■■■□□ 2.07
CYLD-208ENST00000564634 GALTP07902 379 aa27.96■■■□□ 2.07
CYLD-208ENST00000564634 SLC11A1P49279 550 aa27.96■■■□□ 2.07
CYLD-208ENST00000564634 IL17AQ16552 155 aa27.96■■■□□ 2.07
CYLD-208ENST00000564634 PLCD3Q8N3E9 789 aa27.96■■■□□ 2.07
CYLD-208ENST00000564634 INO80BQ9C086 356 aaPredicted RBP27.96■■■□□ 2.07
CYLD-208ENST00000564634 COL4A3BPQ9Y5P4 624 aa27.96■■■□□ 2.07
CYLD-208ENST00000564634 IRAK3Q9Y616 596 aa27.96■■■□□ 2.07
CYLD-208ENST00000564634 A0A087WWV3 80 aa27.95■■■□□ 2.06
CYLD-208ENST00000564634 B4GALT3O60512 393 aa27.95■■■□□ 2.06
CYLD-208ENST00000564634 BMP15O95972 392 aa27.95■■■□□ 2.06
CYLD-208ENST00000564634 SSBP05455 408 aaKnown RBP eCLIP27.95■■■□□ 2.06
CYLD-208ENST00000564634 HSP90AA1P07900 732 aaKnown RBP27.95■■■□□ 2.06
CYLD-208ENST00000564634 NBL1P41271 181 aa27.95■■■□□ 2.06
CYLD-208ENST00000564634 GIT2Q14161 759 aa27.95■■■□□ 2.06
CYLD-208ENST00000564634 PTPN14Q15678 1187 aa27.95■■■□□ 2.06
CYLD-208ENST00000564634 CWF19L1Q69YN2 538 aaKnown RBP27.95■■■□□ 2.06
CYLD-208ENST00000564634 POTEGQ6S5H5 508 aa27.95■■■□□ 2.06
CYLD-208ENST00000564634 KSR1Q8IVT5 923 aa27.95■■■□□ 2.06
CYLD-208ENST00000564634 FLCNQ8NFG4 579 aa27.95■■■□□ 2.06
CYLD-208ENST00000564634 PRPF31Q8WWY3 499 aaKnown RBP27.95■■■□□ 2.06
CYLD-208ENST00000564634 NLRP4Q96MN2 994 aa27.95■■■□□ 2.06
CYLD-208ENST00000564634 BMP2KQ9NSY1 1161 aaPredicted RBP27.95■■■□□ 2.06
CYLD-208ENST00000564634 USTQ9Y2C2 406 aa27.95■■■□□ 2.06
CYLD-208ENST00000564634 DMDP11532 3685 aa27.94■■■□□ 2.06
CYLD-208ENST00000564634 STX6O43752 255 aa27.94■■■□□ 2.06
CYLD-208ENST00000564634 KRT79Q5XKE5 535 aa27.94■■■□□ 2.06
CYLD-208ENST00000564634 CATSPER4Q7RTX7 472 aa27.94■■■□□ 2.06
CYLD-208ENST00000564634 FRMD5Q7Z6J6 570 aa27.94■■■□□ 2.06
CYLD-208ENST00000564634 SNX29Q8TEQ0 813 aa27.94■■■□□ 2.06
CYLD-208ENST00000564634 TRAIPQ9BWF2 469 aa27.94■■■□□ 2.06
CYLD-208ENST00000564634 SFXN1Q9H9B4 322 aa27.94■■■□□ 2.06
Retrieved 100 of 20,778 RNA–protein pairs in 17.4 ms