RNA–Protein interactions for RNA: ENST00000564628.1

NME3-207, Transcript of NME/NM23 nucleoside diphosphate kinase 3, humanhuman

TSL 5

Gene NME3, Length 811 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NME3-207ENST00000564628 KIAA1841Q6NSI8 718 aa21.01■□□□□ 0.95
NME3-207ENST00000564628 ZNF410Q86VK4 478 aa21.01■□□□□ 0.95
NME3-207ENST00000564628 ZDHHC14Q8IZN3 488 aa21.01■□□□□ 0.95
NME3-207ENST00000564628 ERMNQ8TAM6 284 aa21.01■□□□□ 0.95
NME3-207ENST00000564628 FAM86C1Q9NVL1 165 aa21.01■□□□□ 0.95
NME3-207ENST00000564628 USTQ9Y2C2 406 aa21.01■□□□□ 0.95
NME3-207ENST00000564628 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP21■□□□□ 0.95
NME3-207ENST00000564628 GALR2O43603 387 aaPredicted RBP21■□□□□ 0.95
NME3-207ENST00000564628 ZC3H11AO75152 810 aaKnown RBP eCLIP21■□□□□ 0.955e-7■□□□□ 8.5
NME3-207ENST00000564628 CA8P35219 290 aa21■□□□□ 0.95
NME3-207ENST00000564628 RARRES1P49788 294 aa21■□□□□ 0.95
NME3-207ENST00000564628 RAB27AP51159 221 aa21■□□□□ 0.95
NME3-207ENST00000564628 XKR9Q5GH70 373 aa21■□□□□ 0.95
NME3-207ENST00000564628 ATAT1Q5SQI0 421 aa21■□□□□ 0.95
NME3-207ENST00000564628 ARL6IP4Q66PJ3 421 aaKnown RBP21■□□□□ 0.95
NME3-207ENST00000564628 HAUS3Q68CZ6 603 aa21■□□□□ 0.95
NME3-207ENST00000564628 TWF2Q6IBS0 349 aaKnown RBP21■□□□□ 0.95
NME3-207ENST00000564628 GLB1LQ6UWU2 654 aa21■□□□□ 0.95
NME3-207ENST00000564628 DTHD1Q6ZMT9 781 aa21■□□□□ 0.95
NME3-207ENST00000564628 TMEM173Q86WV6 379 aaPredicted RBP21■□□□□ 0.95
NME3-207ENST00000564628 EXOC8Q8IYI6 725 aa21■□□□□ 0.95
NME3-207ENST00000564628 TMEM87AQ8NBN3 555 aa21■□□□□ 0.95
NME3-207ENST00000564628 SLC7A3Q8WY07 619 aa21■□□□□ 0.95
NME3-207ENST00000564628 IGSF21Q96ID5 467 aa21■□□□□ 0.95
NME3-207ENST00000564628 LRWD1Q9UFC0 647 aa21■□□□□ 0.95
NME3-207ENST00000564628 A0A087WZ62 844 aa20.99■□□□□ 0.95
NME3-207ENST00000564628 PROB1E7EW31 1015 aa20.99■□□□□ 0.95
NME3-207ENST00000564628 ZNF623O75123 536 aa20.99■□□□□ 0.95
NME3-207ENST00000564628 BMP15O95972 392 aa20.99■□□□□ 0.95
NME3-207ENST00000564628 RARS2Q5T160 578 aaKnown RBP20.99■□□□□ 0.95
NME3-207ENST00000564628 POTEGQ6S5H5 508 aa20.99■□□□□ 0.95
NME3-207ENST00000564628 PLCD3Q8N3E9 789 aa20.99■□□□□ 0.95
NME3-207ENST00000564628 TDRD5Q8NAT2 981 aaKnown RBP20.99■□□□□ 0.95
NME3-207ENST00000564628 SLC22A17Q8WUG5 538 aa20.99■□□□□ 0.95
NME3-207ENST00000564628 FDXACB1Q9BRP7 624 aaPredicted RBP20.99■□□□□ 0.95
NME3-207ENST00000564628 RAB34Q9BZG1 259 aa20.99■□□□□ 0.95
NME3-207ENST00000564628 XPNPEP1Q9NQW7 623 aa20.99■□□□□ 0.95
NME3-207ENST00000564628 FAM105AQ9NUU6 356 aa20.99■□□□□ 0.95
NME3-207ENST00000564628 TBC1D13Q9NVG8 400 aa20.99■□□□□ 0.95
NME3-207ENST00000564628 STK39Q9UEW8 545 aa20.99■□□□□ 0.95
NME3-207ENST00000564628 STK24Q9Y6E0 443 aa20.99■□□□□ 0.95
NME3-207ENST00000564628 GAS2O43903 313 aaKnown RBP20.98■□□□□ 0.95
NME3-207ENST00000564628 GALTP07902 379 aa20.98■□□□□ 0.95
NME3-207ENST00000564628 EMC2Q15006 297 aa20.98■□□□□ 0.95
NME3-207ENST00000564628 NOMO2Q5JPE7 1267 aa20.98■□□□□ 0.95
NME3-207ENST00000564628 PPFIBP1Q86W92 1011 aa20.98■□□□□ 0.95
NME3-207ENST00000564628 PIGOQ8TEQ8 1089 aa20.98■□□□□ 0.95
NME3-207ENST00000564628 LPPQ93052 612 aa20.98■□□□□ 0.95
NME3-207ENST00000564628 NACC1Q96RE7 527 aa20.98■□□□□ 0.95
NME3-207ENST00000564628 NRDE2Q9H7Z3 1164 aa20.98■□□□□ 0.95
NME3-207ENST00000564628 SUCLA2Q9P2R7 463 aaPredicted RBP20.98■□□□□ 0.95
NME3-207ENST00000564628 DBR1Q9UK59 544 aaKnown RBP20.98■□□□□ 0.95
NME3-207ENST00000564628 PIN4Q9Y237 131 aaKnown RBP20.98■□□□□ 0.95
NME3-207ENST00000564628 H0Y858 1186 aa20.97■□□□□ 0.95
NME3-207ENST00000564628 OFD1O75665 1012 aa20.97■□□□□ 0.95
NME3-207ENST00000564628 WEE2P0C1S8 567 aa20.97■□□□□ 0.95
NME3-207ENST00000564628 EPCAMP16422 314 aa20.97■□□□□ 0.95
NME3-207ENST00000564628 ECM1Q16610 540 aa20.97■□□□□ 0.95
NME3-207ENST00000564628 RHPN2Q8IUC4 686 aa20.97■□□□□ 0.95
NME3-207ENST00000564628 C12orf76Q8N812 135 aaPredicted RBP20.97■□□□□ 0.95
NME3-207ENST00000564628 AUTS2Q8WXX7 1259 aa20.97■□□□□ 0.95
NME3-207ENST00000564628 SNX27Q96L92 541 aa20.97■□□□□ 0.95
NME3-207ENST00000564628 MMTAG2Q9BU76 263 aaKnown RBP20.97■□□□□ 0.95
NME3-207ENST00000564628 ZSCAN16Q9H4T2 348 aaPredicted RBP20.97■□□□□ 0.95
NME3-207ENST00000564628 ZFHX2Q9C0A1 2572 aaPredicted RBP20.96■□□□□ 0.95
NME3-207ENST00000564628 PP2D1A8MPX8 630 aa20.96■□□□□ 0.95
NME3-207ENST00000564628 DGAT1O75907 488 aa20.96■□□□□ 0.95
NME3-207ENST00000564628 HSP90AA1P07900 732 aaKnown RBP20.96■□□□□ 0.95
NME3-207ENST00000564628 PDIA4P13667 645 aaKnown RBP20.96■□□□□ 0.95
NME3-207ENST00000564628 CCT6AP40227 531 aaKnown RBP20.96■□□□□ 0.95
NME3-207ENST00000564628 RNASELQ05823 741 aaKnown RBP20.96■□□□□ 0.95
NME3-207ENST00000564628 PTPAQ15257 358 aa20.96■□□□□ 0.95
NME3-207ENST00000564628 SF3A1Q15459 793 aaKnown RBP20.96■□□□□ 0.95
NME3-207ENST00000564628 CATSPER4Q7RTX7 472 aa20.96■□□□□ 0.95
NME3-207ENST00000564628 CABP7Q86V35 215 aa20.96■□□□□ 0.95
NME3-207ENST00000564628 TMEM105Q8N8V8 129 aa20.96■□□□□ 0.95
NME3-207ENST00000564628 SNX29Q8TEQ0 813 aa20.96■□□□□ 0.95
NME3-207ENST00000564628 BCL7CQ8WUZ0 217 aaPredicted RBP20.96■□□□□ 0.95
NME3-207ENST00000564628 PGBD4Q96DM1 585 aa20.96■□□□□ 0.95
NME3-207ENST00000564628 LIMD1Q9UGP4 676 aa20.96■□□□□ 0.95
NME3-207ENST00000564628 MYO10Q9HD67 2058 aa20.95■□□□□ 0.94
NME3-207ENST00000564628 A0A087WWV3 80 aa20.95■□□□□ 0.94
NME3-207ENST00000564628 VWA3AA6NCI4 1184 aa20.95■□□□□ 0.94
NME3-207ENST00000564628 MEIS3P2A8K0S8 358 aa20.95■□□□□ 0.94
NME3-207ENST00000564628 ASGR2P07307 311 aa20.95■□□□□ 0.94
NME3-207ENST00000564628 PTPN14Q15678 1187 aa20.95■□□□□ 0.94
NME3-207ENST00000564628 HYIQ5T013 277 aa20.95■□□□□ 0.94
NME3-207ENST00000564628 ASTLQ6HA08 431 aaPredicted RBP20.95■□□□□ 0.94
NME3-207ENST00000564628 FAM173BQ6P4H8 233 aa20.95■□□□□ 0.94
NME3-207ENST00000564628 TCP11Q8WWU5 503 aa20.95■□□□□ 0.94
NME3-207ENST00000564628 PSPC1Q8WXF1 523 aaKnown RBP20.95■□□□□ 0.94
NME3-207ENST00000564628 TMEM143Q96AN5 459 aa20.95■□□□□ 0.94
NME3-207ENST00000564628 MTRQ99707 1265 aa20.95■□□□□ 0.94
NME3-207ENST00000564628 SFXN1Q9H9B4 322 aa20.95■□□□□ 0.94
NME3-207ENST00000564628 AGPAT5Q9NUQ2 364 aa20.95■□□□□ 0.94
NME3-207ENST00000564628 INPP5FQ9Y2H2 1132 aa20.95■□□□□ 0.94
NME3-207ENST00000564628 COL4A3BPQ9Y5P4 624 aa20.95■□□□□ 0.94
NME3-207ENST00000564628 MORC2Q9Y6X9 1032 aaPredicted RBP20.95■□□□□ 0.94
NME3-207ENST00000564628 PLXNA3P51805 1871 aa20.94■□□□□ 0.94
NME3-207ENST00000564628 DENND4AQ7Z401 1863 aa20.94■□□□□ 0.94
Retrieved 100 of 20,778 RNA–protein pairs in 18.6 ms