RNA–Protein interactions for RNA: ENST00000564587.5

COMMD4-210, Transcript of COMM domain containing 4, humanhuman

TSL 2

Gene COMMD4, Length 588 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COMMD4-210ENST00000564587 KLRC1P26715 233 aa16.91■□□□□ 0.3
COMMD4-210ENST00000564587 PHKA2P46019 1235 aa16.91■□□□□ 0.3
COMMD4-210ENST00000564587 CYP24A1Q07973 514 aa16.91■□□□□ 0.3
COMMD4-210ENST00000564587 PPFIA1Q13136 1202 aa16.91■□□□□ 0.3
COMMD4-210ENST00000564587 MKRN4PQ13434 485 aaPredicted RBP16.91■□□□□ 0.3
COMMD4-210ENST00000564587 SPA17Q15506 151 aa16.91■□□□□ 0.3
COMMD4-210ENST00000564587 CYP4F22Q6NT55 531 aa16.91■□□□□ 0.3
COMMD4-210ENST00000564587 TRIM65Q6PJ69 517 aa16.91■□□□□ 0.3
COMMD4-210ENST00000564587 TLK2Q86UE8 772 aa16.91■□□□□ 0.3
COMMD4-210ENST00000564587 IFNLR1Q8IU57 520 aaPredicted RBP16.91■□□□□ 0.3
COMMD4-210ENST00000564587 METTL13Q8N6R0 699 aa16.91■□□□□ 0.3
COMMD4-210ENST00000564587 RNF149Q8NC42 400 aa16.91■□□□□ 0.3
COMMD4-210ENST00000564587 EHBP1Q8NDI1 1231 aa16.91■□□□□ 0.3
COMMD4-210ENST00000564587 KIF18AQ8NI77 898 aa16.91■□□□□ 0.3
COMMD4-210ENST00000564587 PARD3BQ8TEW8 1205 aa16.91■□□□□ 0.3
COMMD4-210ENST00000564587 FAM81BQ96LP2 452 aa16.91■□□□□ 0.3
COMMD4-210ENST00000564587 MAP7D2Q96T17 732 aa16.91■□□□□ 0.3
COMMD4-210ENST00000564587 CCDC113Q9H0I3 377 aa16.91■□□□□ 0.3
COMMD4-210ENST00000564587 NLRC4Q9NPP4 1024 aa16.91■□□□□ 0.3
COMMD4-210ENST00000564587 LUC7LQ9NQ29 371 aaKnown RBP16.91■□□□□ 0.3
COMMD4-210ENST00000564587 CREBZFQ9NS37 354 aa16.91■□□□□ 0.3
COMMD4-210ENST00000564587 FLRT1Q9NZU1 646 aa16.91■□□□□ 0.3
COMMD4-210ENST00000564587 AGO2Q9UKV8 859 aaKnown RBP16.91■□□□□ 0.3
COMMD4-210ENST00000564587 KAT6AQ92794 2004 aa16.91■□□□□ 0.3
COMMD4-210ENST00000564587 TOM1L1O75674 476 aa16.9■□□□□ 0.3
COMMD4-210ENST00000564587 TRIM49P0CI25 452 aa16.9■□□□□ 0.3
COMMD4-210ENST00000564587 TRIM49CP0CI26 452 aa16.9■□□□□ 0.3
COMMD4-210ENST00000564587 SRGAP2CP0DJJ0 459 aa16.9■□□□□ 0.3
COMMD4-210ENST00000564587 AKR1A1P14550 325 aa16.9■□□□□ 0.3
COMMD4-210ENST00000564587 PSMC4P43686 418 aa16.9■□□□□ 0.3
COMMD4-210ENST00000564587 MXI1P50539 228 aa16.9■□□□□ 0.3
COMMD4-210ENST00000564587 PTENP60484 403 aa16.9■□□□□ 0.3
COMMD4-210ENST00000564587 ETF1P62495 437 aaKnown RBP16.9■□□□□ 0.3
COMMD4-210ENST00000564587 LACTBP83111 547 aaPredicted RBP16.9■□□□□ 0.3
COMMD4-210ENST00000564587 MTF1Q14872 753 aa16.9■□□□□ 0.3
COMMD4-210ENST00000564587 SURF1Q15526 300 aa16.9■□□□□ 0.3
COMMD4-210ENST00000564587 ASIC2Q16515 512 aa16.9■□□□□ 0.3
COMMD4-210ENST00000564587 KRT39Q6A163 491 aa16.9■□□□□ 0.3
COMMD4-210ENST00000564587 DPY19L2P1Q6NXN4 242 aa16.9■□□□□ 0.3
COMMD4-210ENST00000564587 RHPN2Q8IUC4 686 aa16.9■□□□□ 0.3
COMMD4-210ENST00000564587 CBWD2Q8IUF1 395 aa16.9■□□□□ 0.3
COMMD4-210ENST00000564587 ZNF710Q8N1W2 664 aa16.9■□□□□ 0.3
COMMD4-210ENST00000564587 LRRC71Q8N4P6 559 aa16.9■□□□□ 0.3
COMMD4-210ENST00000564587 LINC01465Q8N7H1 131 aa16.9■□□□□ 0.3
COMMD4-210ENST00000564587 KATNAL1Q9BW62 490 aa16.9■□□□□ 0.3
COMMD4-210ENST00000564587 CFHR5Q9BXR6 569 aa16.9■□□□□ 0.3
COMMD4-210ENST00000564587 INTS2Q9H0H0 1204 aaKnown RBP16.9■□□□□ 0.3
COMMD4-210ENST00000564587 DEF6Q9H4E7 631 aa16.9■□□□□ 0.3
COMMD4-210ENST00000564587 TMEM8AQ9HCN3 771 aa16.9■□□□□ 0.3
COMMD4-210ENST00000564587 PRMT7Q9NVM4 692 aaPredicted RBP16.9■□□□□ 0.3
COMMD4-210ENST00000564587 MYO1AQ9UBC5 1043 aa16.9■□□□□ 0.3
COMMD4-210ENST00000564587 A0A0B4J269 797 aa16.89■□□□□ 0.29
COMMD4-210ENST00000564587 GOLGA8IPA6NC78 632 aa16.89■□□□□ 0.29
COMMD4-210ENST00000564587 GOLGA8JA6NMD2 632 aa16.89■□□□□ 0.29
COMMD4-210ENST00000564587 ACKR2O00590 384 aa16.89■□□□□ 0.29
COMMD4-210ENST00000564587 MSCO60682 206 aa16.89■□□□□ 0.29
COMMD4-210ENST00000564587 PRKCBP05771 671 aa16.89■□□□□ 0.29
COMMD4-210ENST00000564587 ADRB2P07550 413 aa16.89■□□□□ 0.29
COMMD4-210ENST00000564587 ZNF286BP0CG31 522 aa16.89■□□□□ 0.29
COMMD4-210ENST00000564587 CYP2C19P33261 490 aa16.89■□□□□ 0.29
COMMD4-210ENST00000564587 STAT1P42224 750 aa16.89■□□□□ 0.29
COMMD4-210ENST00000564587 MATR3P43243 847 aaKnown RBP eCLIP16.89■□□□□ 0.29
COMMD4-210ENST00000564587 CTCFP49711 727 aaPredicted RBP16.89■□□□□ 0.29
COMMD4-210ENST00000564587 DRP2Q13474 957 aa16.89■□□□□ 0.29
COMMD4-210ENST00000564587 RAPGEF1Q13905 1077 aa16.89■□□□□ 0.29
COMMD4-210ENST00000564587 PSMD6Q15008 389 aa16.89■□□□□ 0.29
COMMD4-210ENST00000564587 GRIK4Q16099 956 aa16.89■□□□□ 0.29
COMMD4-210ENST00000564587 FAM187BQ17R55 369 aa16.89■□□□□ 0.29
COMMD4-210ENST00000564587 ARHGAP29Q52LW3 1261 aa16.89■□□□□ 0.29
COMMD4-210ENST00000564587 PRAMEF19Q5SWL8 479 aa16.89■□□□□ 0.29
COMMD4-210ENST00000564587 MTHFD1LQ6UB35 978 aa16.89■□□□□ 0.29
COMMD4-210ENST00000564587 SAAL1Q96ER3 474 aa16.89■□□□□ 0.29
COMMD4-210ENST00000564587 CAPNS2Q96L46 248 aa16.89■□□□□ 0.29
COMMD4-210ENST00000564587 DESI2Q9BSY9 194 aa16.89■□□□□ 0.29
COMMD4-210ENST00000564587 MSTO1Q9BUK6 570 aa16.89■□□□□ 0.29
COMMD4-210ENST00000564587 TARS2Q9BW92 718 aaKnown RBP16.89■□□□□ 0.29
COMMD4-210ENST00000564587 STK33Q9BYT3 514 aa16.89■□□□□ 0.29
COMMD4-210ENST00000564587 FZD8Q9H461 694 aa16.89■□□□□ 0.29
COMMD4-210ENST00000564587 HAUS4Q9H6D7 363 aa16.89■□□□□ 0.29
COMMD4-210ENST00000564587 SIX2Q9NPC8 291 aa16.89■□□□□ 0.29
COMMD4-210ENST00000564587 APEX2Q9UBZ4 518 aa16.89■□□□□ 0.29
COMMD4-210ENST00000564587 COQ4Q9Y3A0 265 aa16.89■□□□□ 0.29
COMMD4-210ENST00000564587 NRCAMQ92823 1304 aa16.89■□□□□ 0.29
COMMD4-210ENST00000564587 CLDN3O15551 220 aa16.88■□□□□ 0.29
COMMD4-210ENST00000564587 AKR1B10O60218 316 aa16.88■□□□□ 0.29
COMMD4-210ENST00000564587 ZEB2O60315 1214 aa16.88■□□□□ 0.29
COMMD4-210ENST00000564587 DUSP11O75319 330 aaKnown RBP16.88■□□□□ 0.29
COMMD4-210ENST00000564587 LCA5LO95447 670 aa16.88■□□□□ 0.29
COMMD4-210ENST00000564587 F2P00734 622 aa16.88■□□□□ 0.29
COMMD4-210ENST00000564587 FERP16591 822 aa16.88■□□□□ 0.29
COMMD4-210ENST00000564587 AP3M2P53677 418 aa16.88■□□□□ 0.29
COMMD4-210ENST00000564587 IGBP1P78318 339 aa16.88■□□□□ 0.29
COMMD4-210ENST00000564587 CLDN10P78369 228 aa16.88■□□□□ 0.29
COMMD4-210ENST00000564587 POU5F1Q01860 360 aaKnown RBP16.88■□□□□ 0.29
COMMD4-210ENST00000564587 GRM1Q13255 1194 aa16.88■□□□□ 0.29
COMMD4-210ENST00000564587 CCL14Q16627 93 aa16.88■□□□□ 0.29
COMMD4-210ENST00000564587 CBWD6Q4V339 395 aa16.88■□□□□ 0.29
COMMD4-210ENST00000564587 EPC2Q52LR7 807 aa16.88■□□□□ 0.29
COMMD4-210ENST00000564587 CBWD3Q5JTY5 395 aa16.88■□□□□ 0.29
COMMD4-210ENST00000564587 CBWD5Q5RIA9 395 aa16.88■□□□□ 0.29
Retrieved 100 of 20,778 RNA–protein pairs in 17.7 ms