RNA–Protein interactions for RNA: ENST00000563220.1

COMMD4-208, Transcript of COMM domain containing 4, humanhuman

TSL 2

Gene COMMD4, Length 1,897 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COMMD4-208ENST00000563220 SETD4Q9NVD3 440 aa19.64■□□□□ 0.73
COMMD4-208ENST00000563220 A0A0B4J269 797 aa19.63■□□□□ 0.73
COMMD4-208ENST00000563220 EXTL3O43909 919 aa19.63■□□□□ 0.73
COMMD4-208ENST00000563220 TRPA1O75762 1119 aa19.63■□□□□ 0.73
COMMD4-208ENST00000563220 PRKCBP05771 671 aa19.63■□□□□ 0.73
COMMD4-208ENST00000563220 CYBAP13498 195 aa19.63■□□□□ 0.73
COMMD4-208ENST00000563220 AKR1A1P14550 325 aa19.63■□□□□ 0.73
COMMD4-208ENST00000563220 GCLMP48507 274 aa19.63■□□□□ 0.73
COMMD4-208ENST00000563220 PTENP60484 403 aa19.63■□□□□ 0.73
COMMD4-208ENST00000563220 CDK17Q00537 523 aa19.63■□□□□ 0.73
COMMD4-208ENST00000563220 CYP24A1Q07973 514 aa19.63■□□□□ 0.73
COMMD4-208ENST00000563220 SLFN12LQ6IEE8 588 aa19.63■□□□□ 0.73
COMMD4-208ENST00000563220 TRIM65Q6PJ69 517 aa19.63■□□□□ 0.73
COMMD4-208ENST00000563220 CCDC127Q96BQ5 260 aa19.63■□□□□ 0.73
COMMD4-208ENST00000563220 POP1Q99575 1024 aaKnown RBP19.63■□□□□ 0.73
COMMD4-208ENST00000563220 C2orf40Q9H1Z8 148 aa19.63■□□□□ 0.73
COMMD4-208ENST00000563220 MINDY3Q9H8M7 445 aa19.63■□□□□ 0.73
COMMD4-208ENST00000563220 AGO2Q9UKV8 859 aaKnown RBP19.63■□□□□ 0.73
COMMD4-208ENST00000563220 FHOD1Q9Y613 1164 aa19.63■□□□□ 0.73
COMMD4-208ENST00000563220 EPN1Q9Y6I3 576 aaPredicted RBP19.63■□□□□ 0.73
COMMD4-208ENST00000563220 CCP110O43303 1012 aa19.62■□□□□ 0.73
COMMD4-208ENST00000563220 ZSCAN12O43309 604 aa19.62■□□□□ 0.73
COMMD4-208ENST00000563220 PLEKP08567 350 aaPredicted RBP19.62■□□□□ 0.73
COMMD4-208ENST00000563220 CHMP4BP1P59074 171 aa19.62■□□□□ 0.73
COMMD4-208ENST00000563220 MYL7Q01449 175 aa19.62■□□□□ 0.73
COMMD4-208ENST00000563220 TRIM32Q13049 653 aa19.62■□□□□ 0.73
COMMD4-208ENST00000563220 MAPK6Q16659 721 aa19.62■□□□□ 0.73
COMMD4-208ENST00000563220 KIAA0753Q2KHM9 967 aa19.62■□□□□ 0.73
COMMD4-208ENST00000563220 MFSD14CQ5VZR4 134 aa19.62■□□□□ 0.73
COMMD4-208ENST00000563220 GJB7Q6PEY0 223 aa19.62■□□□□ 0.73
COMMD4-208ENST00000563220 CRELD2Q6UXH1 353 aaPredicted RBP19.62■□□□□ 0.73
COMMD4-208ENST00000563220 ZPBP2Q6X784 338 aa19.62■□□□□ 0.73
COMMD4-208ENST00000563220 ACRBPQ8NEB7 543 aa19.62■□□□□ 0.73
COMMD4-208ENST00000563220 LMO3Q8TAP4 145 aa19.62■□□□□ 0.73
COMMD4-208ENST00000563220 TMC2Q8TDI7 906 aa19.62■□□□□ 0.73
COMMD4-208ENST00000563220 ACO2Q99798 780 aaKnown RBP19.62■□□□□ 0.73
COMMD4-208ENST00000563220 MRPL4Q9BYD3 311 aaKnown RBP19.62■□□□□ 0.73
COMMD4-208ENST00000563220 FZD8Q9H461 694 aa19.62■□□□□ 0.73
COMMD4-208ENST00000563220 NHEJ1Q9H9Q4 299 aaPredicted RBP19.62■□□□□ 0.73
COMMD4-208ENST00000563220 IFT122Q9HBG6 1241 aa19.62■□□□□ 0.73
COMMD4-208ENST00000563220 RNF186Q9NXI6 227 aa19.62■□□□□ 0.73
COMMD4-208ENST00000563220 ARHGAP20Q9P2F6 1191 aa19.62■□□□□ 0.73
COMMD4-208ENST00000563220 AJAP1Q9UKB5 411 aaPredicted RBP19.62■□□□□ 0.73
COMMD4-208ENST00000563220 AKT3Q9Y243 479 aa19.62■□□□□ 0.73
COMMD4-208ENST00000563220 A0A0U1RQJ8 604 aa19.62■□□□□ 0.73
COMMD4-208ENST00000563220 ZNF233A6NK53 670 aa19.62■□□□□ 0.73
COMMD4-208ENST00000563220 LRRIQ3A6PVS8 624 aaPredicted RBP19.62■□□□□ 0.73
COMMD4-208ENST00000563220 VTNP04004 478 aa19.62■□□□□ 0.73
COMMD4-208ENST00000563220 TNNT1P13805 278 aa19.62■□□□□ 0.73
COMMD4-208ENST00000563220 TMOD1P28289 359 aa19.62■□□□□ 0.73
COMMD4-208ENST00000563220 ACOT2P49753 483 aa19.62■□□□□ 0.73
COMMD4-208ENST00000563220 CPT1AP50416 773 aa19.62■□□□□ 0.73
COMMD4-208ENST00000563220 NLRP11P59045 1033 aaKnown RBP19.62■□□□□ 0.73
COMMD4-208ENST00000563220 PTPN14Q15678 1187 aa19.62■□□□□ 0.73
COMMD4-208ENST00000563220 ZBTB41Q5SVQ8 909 aa19.62■□□□□ 0.73
COMMD4-208ENST00000563220 ATRIPQ8WXE1 791 aa19.62■□□□□ 0.73
COMMD4-208ENST00000563220 PPP1R16BQ96T49 567 aa19.62■□□□□ 0.73
COMMD4-208ENST00000563220 CFHR5Q9BXR6 569 aa19.62■□□□□ 0.73
COMMD4-208ENST00000563220 TMEM117Q9H0C3 514 aa19.62■□□□□ 0.73
COMMD4-208ENST00000563220 ANKFY1Q9P2R3 1169 aa19.62■□□□□ 0.73
COMMD4-208ENST00000563220 TULP1O00294 542 aaPredicted RBP19.61■□□□□ 0.73
COMMD4-208ENST00000563220 KIAA0391O15091 583 aaKnown RBP19.61■□□□□ 0.73
COMMD4-208ENST00000563220 LRRN2O75325 713 aa19.61■□□□□ 0.73
COMMD4-208ENST00000563220 NDUFA10O95299 355 aa19.61■□□□□ 0.73
COMMD4-208ENST00000563220 MYL3P08590 195 aa19.61■□□□□ 0.73
COMMD4-208ENST00000563220 CCDC175P0C221 793 aa19.61■□□□□ 0.73
COMMD4-208ENST00000563220 IQCF3P0C7M6 154 aa19.61■□□□□ 0.73
COMMD4-208ENST00000563220 SMIM10L2AP0DMW4 78 aa19.61■□□□□ 0.73
COMMD4-208ENST00000563220 SMIM10L2BP0DMW5 78 aa19.61■□□□□ 0.73
COMMD4-208ENST00000563220 MBTD1Q05BQ5 628 aa19.61■□□□□ 0.73
COMMD4-208ENST00000563220 POU5F1BQ06416 359 aa19.61■□□□□ 0.73
COMMD4-208ENST00000563220 MFSD10Q14728 455 aa19.61■□□□□ 0.73
COMMD4-208ENST00000563220 KIAA0319LQ8IZA0 1049 aa19.61■□□□□ 0.73
COMMD4-208ENST00000563220 EHBP1Q8NDI1 1231 aa19.61■□□□□ 0.73
COMMD4-208ENST00000563220 SYN2Q92777 582 aaPredicted RBP19.61■□□□□ 0.73
COMMD4-208ENST00000563220 PRIMPOLQ96LW4 560 aa19.61■□□□□ 0.73
COMMD4-208ENST00000563220 MSTO1Q9BUK6 570 aa19.61■□□□□ 0.73
COMMD4-208ENST00000563220 NFKBIZQ9BYH8 718 aa19.61■□□□□ 0.73
COMMD4-208ENST00000563220 INTS2Q9H0H0 1204 aaKnown RBP19.61■□□□□ 0.73
COMMD4-208ENST00000563220 KIAA1586Q9HCI6 787 aa19.61■□□□□ 0.73
COMMD4-208ENST00000563220 FBXL5Q9UKA1 691 aa19.61■□□□□ 0.73
COMMD4-208ENST00000563220 MGAMO43451 1857 aa19.61■□□□□ 0.73
COMMD4-208ENST00000563220 A0A087WZ62 844 aa19.6■□□□□ 0.73
COMMD4-208ENST00000563220 RRN3P2A6NIE6 340 aa19.6■□□□□ 0.73
COMMD4-208ENST00000563220 INO80B-WBP1J3KQ70 363 aa19.6■□□□□ 0.73
COMMD4-208ENST00000563220 HAS3O00219 553 aa19.6■□□□□ 0.73
COMMD4-208ENST00000563220 ACKR2O00590 384 aa19.6■□□□□ 0.73
COMMD4-208ENST00000563220 P4HA2O15460 535 aa19.6■□□□□ 0.73
COMMD4-208ENST00000563220 DUSP11O75319 330 aaKnown RBP19.6■□□□□ 0.73
COMMD4-208ENST00000563220 YY1P25490 414 aa19.6■□□□□ 0.73
COMMD4-208ENST00000563220 MATR3P43243 847 aaKnown RBP eCLIP19.6■□□□□ 0.73
COMMD4-208ENST00000563220 VEGFBP49765 207 aa19.6■□□□□ 0.73
COMMD4-208ENST00000563220 PSEN2P49810 448 aa19.6■□□□□ 0.73
COMMD4-208ENST00000563220 WNT7BP56706 349 aa19.6■□□□□ 0.73
COMMD4-208ENST00000563220 HIC1Q14526 733 aa19.6■□□□□ 0.73
COMMD4-208ENST00000563220 KIF22Q14807 665 aa19.6■□□□□ 0.73
COMMD4-208ENST00000563220 FSCN1Q16658 493 aaKnown RBP19.6■□□□□ 0.73
COMMD4-208ENST00000563220 SFMBT2Q5VUG0 894 aa19.6■□□□□ 0.73
COMMD4-208ENST00000563220 HGSNATQ68CP4 663 aa19.6■□□□□ 0.73
COMMD4-208ENST00000563220 IQCEQ6IPM2 695 aa19.6■□□□□ 0.73
Retrieved 100 of 20,778 RNA–protein pairs in 29.5 ms