RNA–Protein interactions for RNA: ENST00000562956.1

LINC00838-201, long intergenic non-protein coding RNA 838, humanhuman

TSL 1 (best) BASIC

Gene LINC00838, Length 2,936 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00838-201ENST00000562956 SUGCTQ9HAC7 445 aa10.21□□□□□ -0.77
LINC00838-201ENST00000562956 TOPORSQ9NS56 1045 aaPredicted RBP10.21□□□□□ -0.77
LINC00838-201ENST00000562956 KCNG1Q9UIX4 513 aa10.21□□□□□ -0.77
LINC00838-201ENST00000562956 CDC23Q9UJX2 597 aa10.21□□□□□ -0.77
LINC00838-201ENST00000562956 BZW2Q9Y6E2 419 aaKnown RBP10.21□□□□□ -0.77
LINC00838-201ENST00000562956 P4HA2O15460 535 aa10.21□□□□□ -0.78
LINC00838-201ENST00000562956 EVI5O60447 810 aa10.21□□□□□ -0.78
LINC00838-201ENST00000562956 N4BP1O75113 896 aaKnown RBP10.21□□□□□ -0.78
LINC00838-201ENST00000562956 SNAI1O95863 264 aaPredicted RBP10.21□□□□□ -0.78
LINC00838-201ENST00000562956 SOX5P35711 763 aa10.21□□□□□ -0.78
LINC00838-201ENST00000562956 MXI1P50539 228 aa10.21□□□□□ -0.78
LINC00838-201ENST00000562956 HUNKP57058 714 aa10.21□□□□□ -0.78
LINC00838-201ENST00000562956 MAP2K1Q02750 393 aaPredicted RBP10.21□□□□□ -0.78
LINC00838-201ENST00000562956 ARHGEF19Q8IW93 802 aa10.21□□□□□ -0.78
LINC00838-201ENST00000562956 GPD1LQ8N335 351 aa10.21□□□□□ -0.78
LINC00838-201ENST00000562956 LRRC71Q8N4P6 559 aa10.21□□□□□ -0.78
LINC00838-201ENST00000562956 KCNN1Q92952 543 aa10.21□□□□□ -0.78
LINC00838-201ENST00000562956 ZBTB10Q96DT7 871 aa10.21□□□□□ -0.78
LINC00838-201ENST00000562956 ZBTB45Q96K62 511 aaPredicted RBP10.21□□□□□ -0.78
LINC00838-201ENST00000562956 PACSIN1Q9BY11 444 aa10.21□□□□□ -0.78
LINC00838-201ENST00000562956 KATNBL1Q9H079 304 aa10.21□□□□□ -0.78
LINC00838-201ENST00000562956 UTP3Q9NQZ2 479 aaKnown RBP eCLIP10.21□□□□□ -0.78
LINC00838-201ENST00000562956 ABCD1P33897 745 aa10.2□□□□□ -0.78
LINC00838-201ENST00000562956 CETN1Q12798 172 aa10.2□□□□□ -0.78
LINC00838-201ENST00000562956 GRB14Q14449 540 aa10.2□□□□□ -0.78
LINC00838-201ENST00000562956 TERF2Q15554 542 aa10.2□□□□□ -0.78
LINC00838-201ENST00000562956 ARHGAP44Q17R89 818 aa10.2□□□□□ -0.78
LINC00838-201ENST00000562956 FAM110CQ1W6H9 321 aa10.2□□□□□ -0.78
LINC00838-201ENST00000562956 DPP9Q86TI2 863 aa10.2□□□□□ -0.78
LINC00838-201ENST00000562956 DNAAF5Q86Y56 855 aa10.2□□□□□ -0.78
LINC00838-201ENST00000562956 SEMA4DQ92854 862 aa10.2□□□□□ -0.78
LINC00838-201ENST00000562956 TARS2Q9BW92 718 aaKnown RBP10.2□□□□□ -0.78
LINC00838-201ENST00000562956 SMARCAD1Q9H4L7 1026 aa10.2□□□□□ -0.78
LINC00838-201ENST00000562956 UBE2TQ9NPD8 197 aaPredicted RBP10.2□□□□□ -0.78
LINC00838-201ENST00000562956 CDKN2AIPQ9NXV6 580 aaPredicted RBP10.2□□□□□ -0.78
LINC00838-201ENST00000562956 STYXL1Q9Y6J8 313 aa10.2□□□□□ -0.78
LINC00838-201ENST00000562956 C11orf97A0A1B0GVM6 126 aaPredicted RBP10.2□□□□□ -0.78
LINC00838-201ENST00000562956 TTLL13PA6NNM8 815 aa10.2□□□□□ -0.78
LINC00838-201ENST00000562956 PMM2O15305 246 aa10.2□□□□□ -0.78
LINC00838-201ENST00000562956 ADCY3O60266 1144 aa10.2□□□□□ -0.78
LINC00838-201ENST00000562956 ECM2O94769 699 aaPredicted RBP10.2□□□□□ -0.78
LINC00838-201ENST00000562956 DLATP10515 647 aaKnown RBP10.2□□□□□ -0.78
LINC00838-201ENST00000562956 FERP16591 822 aa10.2□□□□□ -0.78
LINC00838-201ENST00000562956 ADCYAP1R1P41586 468 aa10.2□□□□□ -0.78
LINC00838-201ENST00000562956 ZNF467Q7Z7K2 595 aaPredicted RBP10.2□□□□□ -0.78
LINC00838-201ENST00000562956 OLIG1Q8TAK6 271 aa10.2□□□□□ -0.78
LINC00838-201ENST00000562956 TMC2Q8TDI7 906 aa10.2□□□□□ -0.78
LINC00838-201ENST00000562956 FAM84AQ96KN4 292 aa10.2□□□□□ -0.78
LINC00838-201ENST00000562956 RNPEPQ9H4A4 650 aa10.2□□□□□ -0.78
LINC00838-201ENST00000562956 VTA1Q9NP79 307 aa10.2□□□□□ -0.78
LINC00838-201ENST00000562956 TRPC6Q9Y210 931 aa10.2□□□□□ -0.78
LINC00838-201ENST00000562956 PPME1Q9Y570 386 aa10.2□□□□□ -0.78
LINC00838-201ENST00000562956 MYH9P35579 1960 aaKnown RBP10.2□□□□□ -0.78
LINC00838-201ENST00000562956 IGKV6-21A0A0C4DH24 114 aa10.2□□□□□ -0.78
LINC00838-201ENST00000562956 EFCAB8A8MWE9 144 aa10.2□□□□□ -0.78
LINC00838-201ENST00000562956 FOXN3O00409 490 aaPredicted RBP10.2□□□□□ -0.78
LINC00838-201ENST00000562956 EXTL3O43909 919 aa10.2□□□□□ -0.78
LINC00838-201ENST00000562956 PIGRP01833 764 aa10.2□□□□□ -0.78
LINC00838-201ENST00000562956 WNT7BP56706 349 aa10.2□□□□□ -0.78
LINC00838-201ENST00000562956 NLRP11P59045 1033 aaKnown RBP10.2□□□□□ -0.78
LINC00838-201ENST00000562956 LAMTOR4Q0VGL1 99 aa10.2□□□□□ -0.78
LINC00838-201ENST00000562956 IER5Q5VY09 327 aa10.2□□□□□ -0.78
LINC00838-201ENST00000562956 KRT39Q6A163 491 aa10.2□□□□□ -0.78
LINC00838-201ENST00000562956 TRAPPC11Q7Z392 1133 aa10.2□□□□□ -0.78
LINC00838-201ENST00000562956 PSPC1Q8WXF1 523 aaKnown RBP10.2□□□□□ -0.78
LINC00838-201ENST00000562956 MAML3Q96JK9 1138 aa10.2□□□□□ -0.78
LINC00838-201ENST00000562956 TMEM134Q9H6X4 195 aa10.2□□□□□ -0.78
LINC00838-201ENST00000562956 TMEM8AQ9HCN3 771 aa10.2□□□□□ -0.78
LINC00838-201ENST00000562956 PUF60Q9UHX1 559 aaKnown RBP10.2□□□□□ -0.78
LINC00838-201ENST00000562956 CPA4Q9UI42 421 aa10.2□□□□□ -0.78
LINC00838-201ENST00000562956 NAGPAQ9UK23 515 aa10.2□□□□□ -0.78
LINC00838-201ENST00000562956 RBM47A0AV96 593 aaKnown RBP10.19□□□□□ -0.78
LINC00838-201ENST00000562956 ZNF233A6NK53 670 aa10.19□□□□□ -0.78
LINC00838-201ENST00000562956 DDX3XO00571 662 aaKnown RBP eCLIP10.19□□□□□ -0.78
LINC00838-201ENST00000562956 BUB1O43683 1085 aa10.19□□□□□ -0.78
LINC00838-201ENST00000562956 SRGAP2O75044 1071 aa10.19□□□□□ -0.78
LINC00838-201ENST00000562956 GJB1P08034 283 aa10.19□□□□□ -0.78
LINC00838-201ENST00000562956 SRGAP2CP0DJJ0 459 aa10.19□□□□□ -0.78
LINC00838-201ENST00000562956 SCP2P22307 547 aa10.19□□□□□ -0.78
LINC00838-201ENST00000562956 ACOT2P49753 483 aa10.19□□□□□ -0.78
LINC00838-201ENST00000562956 SLC26A2P50443 739 aa10.19□□□□□ -0.78
LINC00838-201ENST00000562956 GABPB1Q06547 395 aaPredicted RBP10.19□□□□□ -0.78
LINC00838-201ENST00000562956 LAMC2Q13753 1193 aa10.19□□□□□ -0.78
LINC00838-201ENST00000562956 TUBB2AQ13885 445 aa10.19□□□□□ -0.78
LINC00838-201ENST00000562956 KIAA0753Q2KHM9 967 aa10.19□□□□□ -0.78
LINC00838-201ENST00000562956 ZBTB41Q5SVQ8 909 aa10.19□□□□□ -0.78
LINC00838-201ENST00000562956 PAPD7Q5XG87 772 aaKnown RBP10.19□□□□□ -0.78
LINC00838-201ENST00000562956 CRELD2Q6UXH1 353 aaPredicted RBP10.19□□□□□ -0.78
LINC00838-201ENST00000562956 PLEKHH3Q7Z736 793 aa10.19□□□□□ -0.78
LINC00838-201ENST00000562956 TRIM58Q8NG06 486 aa10.19□□□□□ -0.78
LINC00838-201ENST00000562956 KAT5Q92993 513 aa10.19□□□□□ -0.78
LINC00838-201ENST00000562956 ELMO3Q96BJ8 720 aa10.19□□□□□ -0.78
LINC00838-201ENST00000562956 TUBB2BQ9BVA1 445 aa10.19□□□□□ -0.78
LINC00838-201ENST00000562956 ANKFY1Q9P2R3 1169 aa10.19□□□□□ -0.78
LINC00838-201ENST00000562956 AGO2Q9UKV8 859 aaKnown RBP10.19□□□□□ -0.78
LINC00838-201ENST00000562956 NENFQ9UMX5 172 aa10.19□□□□□ -0.78
LINC00838-201ENST00000562956 MCM3APO60318 1980 aa10.19□□□□□ -0.78
LINC00838-201ENST00000562956 IGF2BP3O00425 579 aaKnown RBP eCLIP10.19□□□□□ -0.78
LINC00838-201ENST00000562956 TACC1O75410 805 aa10.19□□□□□ -0.78
LINC00838-201ENST00000562956 GH1P01241 217 aa10.19□□□□□ -0.78
Retrieved 100 of 20,778 RNA–protein pairs in 64.5 ms