RNA–Protein interactions for RNA: ENST00000562884.1

CYLD-204, Transcript of CYLD lysine 63 deubiquitinase, humanhuman

TSL 3

Gene CYLD, Length 725 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CYLD-204ENST00000562884 SPIRE2Q8WWL2 714 aa9.8□□□□□ -0.84
CYLD-204ENST00000562884 MRPS27Q92552 414 aaKnown RBP9.8□□□□□ -0.84
CYLD-204ENST00000562884 CPB2Q96IY4 423 aa9.8□□□□□ -0.84
CYLD-204ENST00000562884 PNMA5Q96PV4 448 aa9.8□□□□□ -0.84
CYLD-204ENST00000562884 ASB2Q96Q27 587 aa9.8□□□□□ -0.84
CYLD-204ENST00000562884 CDCA3Q99618 268 aaPredicted RBP9.8□□□□□ -0.84
CYLD-204ENST00000562884 NTPCRQ9BSD7 190 aaKnown RBP9.8□□□□□ -0.84
CYLD-204ENST00000562884 NGRNQ9NPE2 291 aaKnown RBP9.8□□□□□ -0.84
CYLD-204ENST00000562884 KMT5AQ9NQR1 393 aa9.8□□□□□ -0.84
CYLD-204ENST00000562884 TLR9Q9NR96 1032 aa9.8□□□□□ -0.84
CYLD-204ENST00000562884 LARSQ9P2J5 1176 aaKnown RBP9.8□□□□□ -0.84
CYLD-204ENST00000562884 ODF2LQ9ULJ1 636 aa9.8□□□□□ -0.84
CYLD-204ENST00000562884 IPPQ9Y573 584 aa9.8□□□□□ -0.84
CYLD-204ENST00000562884 CLIC4Q9Y696 253 aa9.8□□□□□ -0.84
CYLD-204ENST00000562884 TCF20Q9UGU0 1960 aaKnown RBP9.8□□□□□ -0.84
CYLD-204ENST00000562884 SPTBN5Q9NRC6 3674 aaKnown RBP9.79□□□□□ -0.84
CYLD-204ENST00000562884 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP9.79□□□□□ -0.84
CYLD-204ENST00000562884 RBAK-RBAKDNI3L0D1 243 aa9.79□□□□□ -0.84
CYLD-204ENST00000562884 ALDH2P05091 517 aa9.79□□□□□ -0.84
CYLD-204ENST00000562884 ZSCAN22P10073 491 aaPredicted RBP9.79□□□□□ -0.84
CYLD-204ENST00000562884 PLS3P13797 630 aa9.79□□□□□ -0.84
CYLD-204ENST00000562884 MARCKSP29966 332 aaPredicted RBP9.79□□□□□ -0.84
CYLD-204ENST00000562884 DDIT3P35638 169 aa9.79□□□□□ -0.84
CYLD-204ENST00000562884 NPTX2P47972 431 aa9.79□□□□□ -0.84
CYLD-204ENST00000562884 NASPP49321 788 aaPredicted RBP9.79□□□□□ -0.84
CYLD-204ENST00000562884 SLC12A3P55017 1021 aa9.79□□□□□ -0.84
CYLD-204ENST00000562884 PEX3P56589 373 aa9.79□□□□□ -0.84
CYLD-204ENST00000562884 BCAR1P56945 870 aa9.79□□□□□ -0.84
CYLD-204ENST00000562884 GIT2Q14161 759 aa9.79□□□□□ -0.84
CYLD-204ENST00000562884 STK38Q15208 465 aa9.79□□□□□ -0.84
CYLD-204ENST00000562884 AGMOQ6ZNB7 445 aa9.79□□□□□ -0.84
CYLD-204ENST00000562884 KCNK18Q7Z418 384 aa9.79□□□□□ -0.84
CYLD-204ENST00000562884 SMG8Q8ND04 991 aaKnown RBP9.79□□□□□ -0.84
CYLD-204ENST00000562884 MICAL1Q8TDZ2 1067 aa9.79□□□□□ -0.84
CYLD-204ENST00000562884 BSNDQ8WZ55 320 aa9.79□□□□□ -0.84
CYLD-204ENST00000562884 LPPQ93052 612 aa9.79□□□□□ -0.84
CYLD-204ENST00000562884 PABPC5Q96DU9 382 aaKnown RBP9.79□□□□□ -0.84
CYLD-204ENST00000562884 TMEM169Q96HH4 297 aa9.79□□□□□ -0.84
CYLD-204ENST00000562884 TMEM175Q9BSA9 504 aa9.79□□□□□ -0.84
CYLD-204ENST00000562884 RUSC1Q9BVN2 902 aa9.79□□□□□ -0.84
CYLD-204ENST00000562884 EIF2AQ9BY44 585 aaKnown RBP9.79□□□□□ -0.84
CYLD-204ENST00000562884 CCDC113Q9H0I3 377 aa9.79□□□□□ -0.84
CYLD-204ENST00000562884 TBC1D13Q9NVG8 400 aa9.79□□□□□ -0.84
CYLD-204ENST00000562884 STK17AQ9UEE5 414 aa9.79□□□□□ -0.84
CYLD-204ENST00000562884 CFAP45Q9UL16 551 aa9.79□□□□□ -0.84
CYLD-204ENST00000562884 FAM50BQ9Y247 325 aa9.79□□□□□ -0.84
CYLD-204ENST00000562884 INPP5FQ9Y2H2 1132 aa9.79□□□□□ -0.84
CYLD-204ENST00000562884 TCHHQ07283 1943 aa9.79□□□□□ -0.84
CYLD-204ENST00000562884 ARL5CA6NH57 179 aa9.78□□□□□ -0.84
CYLD-204ENST00000562884 SPTLC2O15270 562 aa9.78□□□□□ -0.84
CYLD-204ENST00000562884 ZC3H11AO75152 810 aaKnown RBP eCLIP9.78□□□□□ -0.84
CYLD-204ENST00000562884 PPP6R2O75170 966 aa9.78□□□□□ -0.84
CYLD-204ENST00000562884 NPTXRO95502 500 aa9.78□□□□□ -0.84
CYLD-204ENST00000562884 YEATS4O95619 227 aa9.78□□□□□ -0.84
CYLD-204ENST00000562884 KRT18P05783 430 aaKnown RBP9.78□□□□□ -0.84
CYLD-204ENST00000562884 SRGAP2BP0DMP2 458 aa9.78□□□□□ -0.84
CYLD-204ENST00000562884 PLCG1P19174 1290 aa9.78□□□□□ -0.84
CYLD-204ENST00000562884 CEBPZQ03701 1054 aaKnown RBP9.78□□□□□ -0.84
CYLD-204ENST00000562884 STRN3Q13033 797 aa9.78□□□□□ -0.84
CYLD-204ENST00000562884 COL19A1Q14993 1142 aa9.78□□□□□ -0.84
CYLD-204ENST00000562884 TCEAL5Q5H9L2 206 aa9.78□□□□□ -0.84
CYLD-204ENST00000562884 ATF7IP2Q5U623 682 aa9.78□□□□□ -0.84
CYLD-204ENST00000562884 RRAGBQ5VZM2 374 aa9.78□□□□□ -0.84
CYLD-204ENST00000562884 CCDC73Q6ZRK6 1079 aa9.78□□□□□ -0.84
CYLD-204ENST00000562884 GPBP1Q86WP2 473 aa9.78□□□□□ -0.84
CYLD-204ENST00000562884 DAW1Q8N136 415 aa9.78□□□□□ -0.84
CYLD-204ENST00000562884 SLC39A11Q8N1S5 342 aa9.78□□□□□ -0.84
CYLD-204ENST00000562884 LINC00301Q8NCQ3 95 aa9.78□□□□□ -0.84
CYLD-204ENST00000562884 LARP4BQ92615 738 aaKnown RBP9.78□□□□□ -0.84
CYLD-204ENST00000562884 RAD54LQ92698 747 aa9.78□□□□□ -0.84
CYLD-204ENST00000562884 USP28Q96RU2 1077 aa9.78□□□□□ -0.84
CYLD-204ENST00000562884 PLIN2Q99541 437 aa9.78□□□□□ -0.84
CYLD-204ENST00000562884 MRPL4Q9BYD3 311 aaKnown RBP9.78□□□□□ -0.84
CYLD-204ENST00000562884 NRDE2Q9H7Z3 1164 aa9.78□□□□□ -0.84
CYLD-204ENST00000562884 UBE2ZQ9H832 354 aaPredicted RBP9.78□□□□□ -0.84
CYLD-204ENST00000562884 PRDM6Q9NQX0 595 aa9.78□□□□□ -0.84
CYLD-204ENST00000562884 ARHGAP28Q9P2N2 729 aa9.78□□□□□ -0.84
CYLD-204ENST00000562884 PARP2Q9UGN5 583 aa9.78□□□□□ -0.84
CYLD-204ENST00000562884 FBXO2Q9UK22 296 aaPredicted RBP9.78□□□□□ -0.84
CYLD-204ENST00000562884 TNFSF13BQ9Y275 285 aa9.78□□□□□ -0.84
CYLD-204ENST00000562884 FAN1Q9Y2M0 1017 aa9.78□□□□□ -0.84
CYLD-204ENST00000562884 FSCN2O14926 492 aa9.77□□□□□ -0.85
CYLD-204ENST00000562884 B4GALT5O43286 388 aa9.77□□□□□ -0.85
CYLD-204ENST00000562884 TBCAO75347 108 aaKnown RBP9.77□□□□□ -0.85
CYLD-204ENST00000562884 FAM13AO94988 1023 aa9.77□□□□□ -0.85
CYLD-204ENST00000562884 F13A1P00488 732 aa9.77□□□□□ -0.85
CYLD-204ENST00000562884 GALTP07902 379 aa9.77□□□□□ -0.85
CYLD-204ENST00000562884 LIG1P18858 919 aa9.77□□□□□ -0.85
CYLD-204ENST00000562884 MAPK7Q13164 816 aa9.77□□□□□ -0.85
CYLD-204ENST00000562884 CAMK1Q14012 370 aa9.77□□□□□ -0.85
CYLD-204ENST00000562884 SMC1AQ14683 1233 aaKnown RBP9.77□□□□□ -0.85
CYLD-204ENST00000562884 KARSQ15046 597 aaKnown RBP9.77□□□□□ -0.85
CYLD-204ENST00000562884 LEXMQ3ZCV2 418 aa9.77□□□□□ -0.85
CYLD-204ENST00000562884 LONRF3Q496Y0 759 aa9.77□□□□□ -0.85
CYLD-204ENST00000562884 FAM173BQ6P4H8 233 aa9.77□□□□□ -0.85
CYLD-204ENST00000562884 SV2BQ7L1I2 683 aa9.77□□□□□ -0.85
CYLD-204ENST00000562884 TMC7Q7Z402 723 aa9.77□□□□□ -0.85
CYLD-204ENST00000562884 DDX53Q86TM3 631 aaKnown RBP9.77□□□□□ -0.85
CYLD-204ENST00000562884 EFHBQ8N7U6 833 aa9.77□□□□□ -0.85
CYLD-204ENST00000562884 KCNG4Q8TDN1 519 aa9.77□□□□□ -0.85
Retrieved 100 of 20,778 RNA–protein pairs in 37.3 ms