RNA–Protein interactions for RNA: ENST00000561400.1

HERC1-214, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase family member 1, humanhuman

TSL 2

Gene HERC1, Length 2,215 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC1-214ENST00000561400 CLTBP09497 229 aa12.77□□□□□ -0.37
HERC1-214ENST00000561400 IQCF3P0C7M6 154 aa12.77□□□□□ -0.37
HERC1-214ENST00000561400 SMTNP53814 917 aa12.77□□□□□ -0.37
HERC1-214ENST00000561400 PTENP60484 403 aa12.77□□□□□ -0.37
HERC1-214ENST00000561400 POU5F1BQ06416 359 aa12.77□□□□□ -0.37
HERC1-214ENST00000561400 TFDP1Q14186 410 aa12.77□□□□□ -0.37
HERC1-214ENST00000561400 CDCA2Q69YH5 1023 aaPredicted RBP12.77□□□□□ -0.37
HERC1-214ENST00000561400 HAUS6Q7Z4H7 955 aa12.77□□□□□ -0.37
HERC1-214ENST00000561400 SMYD4Q8IYR2 804 aaPredicted RBP12.77□□□□□ -0.37
HERC1-214ENST00000561400 CAGE1Q8TC20 777 aa12.77□□□□□ -0.37
HERC1-214ENST00000561400 STRA6Q9BX79 667 aa12.77□□□□□ -0.37
HERC1-214ENST00000561400 TMEM39AQ9NV64 488 aa12.77□□□□□ -0.37
HERC1-214ENST00000561400 IRAK4Q9NWZ3 460 aa12.77□□□□□ -0.37
HERC1-214ENST00000561400 ETAA1Q9NY74 926 aa12.77□□□□□ -0.37
HERC1-214ENST00000561400 TRPV2Q9Y5S1 764 aa12.77□□□□□ -0.37
HERC1-214ENST00000561400 K7ENM7 598 aa12.76□□□□□ -0.37
HERC1-214ENST00000561400 PITPNM1O00562 1244 aa12.76□□□□□ -0.37
HERC1-214ENST00000561400 CTIFO43310 598 aaKnown RBP12.76□□□□□ -0.37
HERC1-214ENST00000561400 MYBP10242 640 aa12.76□□□□□ -0.37
HERC1-214ENST00000561400 MAPTP10636 758 aaKnown RBP12.76□□□□□ -0.37
HERC1-214ENST00000561400 CRYBB1P53674 252 aaPredicted RBP12.76□□□□□ -0.37
HERC1-214ENST00000561400 IRX1P78414 480 aaPredicted RBP12.76□□□□□ -0.37
HERC1-214ENST00000561400 CDC42EP1Q00587 391 aa12.76□□□□□ -0.37
HERC1-214ENST00000561400 PSMD2Q13200 908 aa12.76□□□□□ -0.37
HERC1-214ENST00000561400 MORC3Q14149 939 aa12.76□□□□□ -0.37
HERC1-214ENST00000561400 MBTPS1Q14703 1052 aa12.76□□□□□ -0.37
HERC1-214ENST00000561400 FAM26DQ5JW98 314 aa12.76□□□□□ -0.37
HERC1-214ENST00000561400 TAS1R3Q7RTX0 852 aa12.76□□□□□ -0.37
HERC1-214ENST00000561400 IFNLR1Q8IU57 520 aaPredicted RBP12.76□□□□□ -0.37
HERC1-214ENST00000561400 DEPTORQ8TB45 409 aa12.76□□□□□ -0.37
HERC1-214ENST00000561400 TATDN2Q93075 761 aa12.76□□□□□ -0.37
HERC1-214ENST00000561400 CCDC47Q96A33 483 aaKnown RBP12.76□□□□□ -0.37
HERC1-214ENST00000561400 SCLT1Q96NL6 688 aa12.76□□□□□ -0.37
HERC1-214ENST00000561400 NFKBIZQ9BYH8 718 aa12.76□□□□□ -0.37
HERC1-214ENST00000561400 PPP1R12CQ9BZL4 782 aa12.76□□□□□ -0.37
HERC1-214ENST00000561400 HIPK3Q9H422 1215 aa12.76□□□□□ -0.37
HERC1-214ENST00000561400 RMND1Q9NWS8 449 aa12.76□□□□□ -0.37
HERC1-214ENST00000561400 TRIM43BA6NCK2 446 aa12.76□□□□□ -0.37
HERC1-214ENST00000561400 M0QZ92 97 aa12.76□□□□□ -0.37
HERC1-214ENST00000561400 PPP1R37O75864 691 aa12.76□□□□□ -0.37
HERC1-214ENST00000561400 GCNT3O95395 438 aa12.76□□□□□ -0.37
HERC1-214ENST00000561400 DARSP14868 501 aaKnown RBP12.76□□□□□ -0.37
HERC1-214ENST00000561400 EIF4BP23588 611 aaKnown RBP12.76□□□□□ -0.37
HERC1-214ENST00000561400 CYP2C18P33260 490 aa12.76□□□□□ -0.37
HERC1-214ENST00000561400 PHKA2P46019 1235 aa12.76□□□□□ -0.37
HERC1-214ENST00000561400 KCNA1Q09470 495 aa12.76□□□□□ -0.37
HERC1-214ENST00000561400 BFSP2Q13515 415 aa12.76□□□□□ -0.37
HERC1-214ENST00000561400 ZNF658Q5TYW1 1059 aaPredicted RBP12.76□□□□□ -0.37
HERC1-214ENST00000561400 EPM2AIP1Q7L775 607 aaPredicted RBP12.76□□□□□ -0.37
HERC1-214ENST00000561400 TRIM43Q96BQ3 446 aaPredicted RBP12.76□□□□□ -0.37
HERC1-214ENST00000561400 ST6GALNAC4Q9H4F1 302 aa12.76□□□□□ -0.37
HERC1-214ENST00000561400 MAPK8IP1Q9UQF2 711 aa12.76□□□□□ -0.37
HERC1-214ENST00000561400 DENND3A2RUS2 1198 aa12.75□□□□□ -0.37
HERC1-214ENST00000561400 EDN1P05305 212 aa12.75□□□□□ -0.37
HERC1-214ENST00000561400 SELPP16109 830 aa12.75□□□□□ -0.37
HERC1-214ENST00000561400 FGFR4P22455 802 aa12.75□□□□□ -0.37
HERC1-214ENST00000561400 ITGB8P26012 769 aa12.75□□□□□ -0.37
HERC1-214ENST00000561400 GTF2BQ00403 316 aa12.75□□□□□ -0.37
HERC1-214ENST00000561400 MBTD1Q05BQ5 628 aa12.75□□□□□ -0.37
HERC1-214ENST00000561400 GPNMBQ14956 572 aa12.75□□□□□ -0.37
HERC1-214ENST00000561400 ZSCAN23Q3MJ62 389 aa12.75□□□□□ -0.37
HERC1-214ENST00000561400 LRRC8DQ7L1W4 858 aa12.75□□□□□ -0.37
HERC1-214ENST00000561400 CCDC155Q8N6L0 562 aa12.75□□□□□ -0.37
HERC1-214ENST00000561400 SCFD1Q8WVM8 642 aa12.75□□□□□ -0.37
HERC1-214ENST00000561400 GCOM2Q9BZD3 368 aaPredicted RBP12.75□□□□□ -0.37
HERC1-214ENST00000561400 CCDC113Q9H0I3 377 aa12.75□□□□□ -0.37
HERC1-214ENST00000561400 WNT8AQ9H1J5 351 aa12.75□□□□□ -0.37
HERC1-214ENST00000561400 IKZF4Q9H2S9 585 aa12.75□□□□□ -0.37
HERC1-214ENST00000561400 USP20Q9Y2K6 914 aa12.75□□□□□ -0.37
HERC1-214ENST00000561400 SYCE3A1L190 88 aa12.74□□□□□ -0.37
HERC1-214ENST00000561400 TTLL13PA6NNM8 815 aa12.74□□□□□ -0.37
HERC1-214ENST00000561400 INO80B-WBP1J3KQ70 363 aa12.74□□□□□ -0.37
HERC1-214ENST00000561400 K7ERI5 159 aa12.74□□□□□ -0.37
HERC1-214ENST00000561400 TRIM66O15016 1216 aa12.74□□□□□ -0.37
HERC1-214ENST00000561400 PRPF6O94906 941 aaKnown RBP12.74□□□□□ -0.37
HERC1-214ENST00000561400 HOXD13P35453 343 aa12.74□□□□□ -0.37
HERC1-214ENST00000561400 CCL23P55773 120 aa12.74□□□□□ -0.37
HERC1-214ENST00000561400 SYCP1Q15431 976 aa12.74□□□□□ -0.37
HERC1-214ENST00000561400 FBXO47Q5MNV8 452 aa12.74□□□□□ -0.37
HERC1-214ENST00000561400 ZNF280DQ6N043 979 aa12.74□□□□□ -0.37
HERC1-214ENST00000561400 SRGAP1Q7Z6B7 1085 aa12.74□□□□□ -0.37
HERC1-214ENST00000561400 ZBTB8OSQ8IWT0 167 aa12.74□□□□□ -0.37
HERC1-214ENST00000561400 TRIML1Q8N9V2 468 aa12.74□□□□□ -0.37
HERC1-214ENST00000561400 KCNN1Q92952 543 aa12.74□□□□□ -0.37
HERC1-214ENST00000561400 INO80BQ9C086 356 aaPredicted RBP12.74□□□□□ -0.37
HERC1-214ENST00000561400 AGO3Q9H9G7 860 aaKnown RBP12.74□□□□□ -0.37
HERC1-214ENST00000561400 PRDM5Q9NQX1 630 aaPredicted RBP12.74□□□□□ -0.37
HERC1-214ENST00000561400 NOC2LQ9Y3T9 749 aaKnown RBP12.74□□□□□ -0.37
HERC1-214ENST00000561400 KIAA0355O15063 1070 aa12.74□□□□□ -0.37
HERC1-214ENST00000561400 CD44P16070 742 aaKnown RBP12.74□□□□□ -0.37
HERC1-214ENST00000561400 PRCPP42785 496 aa12.74□□□□□ -0.37
HERC1-214ENST00000561400 EFNA5P52803 228 aa12.74□□□□□ -0.37
HERC1-214ENST00000561400 LPIN1Q14693 890 aa12.74□□□□□ -0.37
HERC1-214ENST00000561400 AMHR2Q16671 573 aa12.74□□□□□ -0.37
HERC1-214ENST00000561400 TTC31Q49AM3 519 aaPredicted RBP12.74□□□□□ -0.37
HERC1-214ENST00000561400 GET4Q7L5D6 327 aaPredicted RBP12.74□□□□□ -0.37
HERC1-214ENST00000561400 SLC17A8Q8NDX2 589 aa12.74□□□□□ -0.37
HERC1-214ENST00000561400 ZNF507Q8TCN5 953 aa12.74□□□□□ -0.37
HERC1-214ENST00000561400 SCLYQ96I15 445 aa12.74□□□□□ -0.37
HERC1-214ENST00000561400 HTATIP2Q9BUP3 242 aa12.74□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 28.3 ms