RNA–Protein interactions for RNA: ENST00000560679.1

TPM1-225, Transcript of tropomyosin 1, humanhuman

TSL 3

Gene TPM1, Length 292 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-225ENST00000560679 PGBD4Q96DM1 585 aa11.14□□□□□ -0.63
TPM1-225ENST00000560679 B3GALT6Q96L58 329 aa11.14□□□□□ -0.63
TPM1-225ENST00000560679 NLRP4Q96MN2 994 aa11.14□□□□□ -0.63
TPM1-225ENST00000560679 NIFKQ9BYG3 293 aaKnown RBP11.14□□□□□ -0.63
TPM1-225ENST00000560679 PRKD2Q9BZL6 878 aa11.14□□□□□ -0.63
TPM1-225ENST00000560679 ZMYND12Q9H0C1 365 aa11.14□□□□□ -0.63
TPM1-225ENST00000560679 MINDY3Q9H8M7 445 aa11.14□□□□□ -0.63
TPM1-225ENST00000560679 IFT122Q9HBG6 1241 aa11.14□□□□□ -0.63
TPM1-225ENST00000560679 SPATA6Q9NWH7 488 aaPredicted RBP11.14□□□□□ -0.63
TPM1-225ENST00000560679 SUCLA2Q9P2R7 463 aaPredicted RBP11.14□□□□□ -0.63
TPM1-225ENST00000560679 CDV3Q9UKY7 258 aaKnown RBP11.14□□□□□ -0.63
TPM1-225ENST00000560679 CNTNAP2Q9UHC6 1331 aa11.13□□□□□ -0.63
TPM1-225ENST00000560679 ZBTB43O43298 467 aa11.13□□□□□ -0.63
TPM1-225ENST00000560679 LAMTOR5O43504 91 aa11.13□□□□□ -0.63
TPM1-225ENST00000560679 LILRB5O75023 590 aa11.13□□□□□ -0.63
TPM1-225ENST00000560679 ALDH2P05091 517 aa11.13□□□□□ -0.63
TPM1-225ENST00000560679 SDHBP21912 280 aa11.13□□□□□ -0.63
TPM1-225ENST00000560679 HOXA11P31270 313 aaPredicted RBP11.13□□□□□ -0.63
TPM1-225ENST00000560679 LMNB2Q03252 620 aa11.13□□□□□ -0.63
TPM1-225ENST00000560679 PFKFB3Q16875 520 aaPredicted RBP11.13□□□□□ -0.63
TPM1-225ENST00000560679 LILRA6Q6PI73 481 aa11.13□□□□□ -0.63
TPM1-225ENST00000560679 B3GNT9Q6UX72 402 aa11.13□□□□□ -0.63
TPM1-225ENST00000560679 PALB2Q86YC2 1186 aa11.13□□□□□ -0.63
TPM1-225ENST00000560679 REXO1Q8N1G1 1221 aaKnown RBP11.13□□□□□ -0.63
TPM1-225ENST00000560679 SMG8Q8ND04 991 aaKnown RBP11.13□□□□□ -0.63
TPM1-225ENST00000560679 HDAC7Q8WUI4 952 aa11.13□□□□□ -0.63
TPM1-225ENST00000560679 SLC5A5Q92911 643 aa11.13□□□□□ -0.63
TPM1-225ENST00000560679 TCEANC2Q96MN5 208 aa11.13□□□□□ -0.63
TPM1-225ENST00000560679 CHST7Q9NS84 486 aa11.13□□□□□ -0.63
TPM1-225ENST00000560679 ZDHHC7Q9NXF8 308 aa11.13□□□□□ -0.63
TPM1-225ENST00000560679 ASPMQ8IZT6 3477 aa11.13□□□□□ -0.63
TPM1-225ENST00000560679 TDRD15B5MCY1 1934 aaKnown RBP11.13□□□□□ -0.63
TPM1-225ENST00000560679 GOLGA8AA7E2F4 631 aa11.12□□□□□ -0.63
TPM1-225ENST00000560679 GOLGA8BA8MQT2 603 aa11.12□□□□□ -0.63
TPM1-225ENST00000560679 PRR5-ARHGAP8B1AHC4 643 aa11.12□□□□□ -0.63
TPM1-225ENST00000560679 GAS7O60861 476 aa11.12□□□□□ -0.63
TPM1-225ENST00000560679 MAFO75444 373 aaPredicted RBP11.12□□□□□ -0.63
TPM1-225ENST00000560679 PSMD10O75832 226 aa11.12□□□□□ -0.63
TPM1-225ENST00000560679 CD72P21854 359 aa11.12□□□□□ -0.63
TPM1-225ENST00000560679 TARSP26639 723 aaKnown RBP11.12□□□□□ -0.63
TPM1-225ENST00000560679 SFNP31947 248 aa11.12□□□□□ -0.63
TPM1-225ENST00000560679 OR1G1P47890 313 aa11.12□□□□□ -0.63
TPM1-225ENST00000560679 JAK3P52333 1124 aa11.12□□□□□ -0.63
TPM1-225ENST00000560679 NTHL1P78549 312 aa11.12□□□□□ -0.63
TPM1-225ENST00000560679 ARHGAP8P85298 464 aa11.12□□□□□ -0.63
TPM1-225ENST00000560679 CDC42EP1Q00587 391 aa11.12□□□□□ -0.63
TPM1-225ENST00000560679 UBXN2BQ14CS0 331 aa11.12□□□□□ -0.63
TPM1-225ENST00000560679 NECTIN1Q15223 517 aa11.12□□□□□ -0.63
TPM1-225ENST00000560679 XKR3Q5GH77 459 aa11.12□□□□□ -0.63
TPM1-225ENST00000560679 LRCH2Q5VUJ6 765 aa11.12□□□□□ -0.63
TPM1-225ENST00000560679 PLA2G4FQ68DD2 849 aa11.12□□□□□ -0.63
TPM1-225ENST00000560679 ELMSAN1Q6PJG2 1045 aa11.12□□□□□ -0.63
TPM1-225ENST00000560679 TSSK4Q6SA08 328 aa11.12□□□□□ -0.63
TPM1-225ENST00000560679 GPR161Q8N6U8 529 aaKnown RBP11.12□□□□□ -0.63
TPM1-225ENST00000560679 SHDQ96IW2 340 aa11.12□□□□□ -0.63
TPM1-225ENST00000560679 MBOAT7Q96N66 472 aa11.12□□□□□ -0.63
TPM1-225ENST00000560679 FAM193BQ96PV7 902 aaPredicted RBP11.12□□□□□ -0.63
TPM1-225ENST00000560679 RIT2Q99578 217 aa11.12□□□□□ -0.63
TPM1-225ENST00000560679 RTKNQ9BST9 563 aa11.12□□□□□ -0.63
TPM1-225ENST00000560679 BCO2Q9BYV7 579 aa11.12□□□□□ -0.63
TPM1-225ENST00000560679 INO80BQ9C086 356 aaPredicted RBP11.12□□□□□ -0.63
TPM1-225ENST00000560679 PLEKHA4Q9H4M7 779 aa11.12□□□□□ -0.63
TPM1-225ENST00000560679 PIDD1Q9HB75 910 aa11.12□□□□□ -0.63
TPM1-225ENST00000560679 LTB4R2Q9NPC1 389 aa11.12□□□□□ -0.63
TPM1-225ENST00000560679 PRMT8Q9NR22 394 aaPredicted RBP11.12□□□□□ -0.63
TPM1-225ENST00000560679 ZSCAN32Q9NX65 697 aa11.12□□□□□ -0.63
TPM1-225ENST00000560679 MIOSQ9NXC5 875 aa11.12□□□□□ -0.63
TPM1-225ENST00000560679 DPP7Q9UHL4 492 aa11.12□□□□□ -0.63
TPM1-225ENST00000560679 SSX2IPQ9Y2D8 614 aa11.12□□□□□ -0.63
TPM1-225ENST00000560679 NOTCH4Q99466 2003 aa11.12□□□□□ -0.63
TPM1-225ENST00000560679 COL4A2P08572 1712 aa11.12□□□□□ -0.63
TPM1-225ENST00000560679 SPEGQ15772 3267 aa11.11□□□□□ -0.63
TPM1-225ENST00000560679 CEP295Q9C0D2 2601 aa11.11□□□□□ -0.63
TPM1-225ENST00000560679 SHISA7A6NL88 538 aa11.11□□□□□ -0.63
TPM1-225ENST00000560679 FAM170BA6NMN3 283 aa11.11□□□□□ -0.63
TPM1-225ENST00000560679 ZMYND10O75800 440 aa11.11□□□□□ -0.63
TPM1-225ENST00000560679 TDGF1P13385 188 aa11.11□□□□□ -0.63
TPM1-225ENST00000560679 RPL17P18621 184 aaKnown RBP11.11□□□□□ -0.63
TPM1-225ENST00000560679 NCLP19338 710 aaKnown RBP11.11□□□□□ -0.63
TPM1-225ENST00000560679 FSHRP23945 695 aa11.11□□□□□ -0.63
TPM1-225ENST00000560679 MLH1P40692 756 aa11.11□□□□□ -0.63
TPM1-225ENST00000560679 SCNN1GP51170 649 aa11.11□□□□□ -0.63
TPM1-225ENST00000560679 PRKCQQ04759 706 aa11.11□□□□□ -0.63
TPM1-225ENST00000560679 SLC44A4Q53GD3 710 aa11.11□□□□□ -0.63
TPM1-225ENST00000560679 SYNE3Q6ZMZ3 975 aa11.11□□□□□ -0.63
TPM1-225ENST00000560679 ANO5Q75V66 913 aa11.11□□□□□ -0.63
TPM1-225ENST00000560679 GRASPQ7Z6J2 395 aaPredicted RBP11.11□□□□□ -0.63
TPM1-225ENST00000560679 GLYCTKQ8IVS8 523 aa11.11□□□□□ -0.63
TPM1-225ENST00000560679 ATRIPQ8WXE1 791 aa11.11□□□□□ -0.63
TPM1-225ENST00000560679 PHKBQ93100 1093 aa11.11□□□□□ -0.63
TPM1-225ENST00000560679 CLDN23Q96B33 292 aa11.11□□□□□ -0.63
TPM1-225ENST00000560679 ZFP42Q96MM3 310 aa11.11□□□□□ -0.63
TPM1-225ENST00000560679 TEKT3Q9BXF9 490 aa11.11□□□□□ -0.63
TPM1-225ENST00000560679 EIF2AQ9BY44 585 aaKnown RBP11.11□□□□□ -0.63
TPM1-225ENST00000560679 OSBPL6Q9BZF3 934 aa11.11□□□□□ -0.63
TPM1-225ENST00000560679 GPR62Q9BZJ7 368 aa11.11□□□□□ -0.63
TPM1-225ENST00000560679 RNF39Q9H2S5 420 aa11.11□□□□□ -0.63
TPM1-225ENST00000560679 KANSL3Q9P2N6 904 aa11.11□□□□□ -0.63
TPM1-225ENST00000560679 RALYQ9UKM9 306 aaKnown RBP11.11□□□□□ -0.63
TPM1-225ENST00000560679 CDH7Q9ULB5 785 aa11.11□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 30 ms