RNA–Protein interactions for RNA: ENST00000560641.5

PBX1-219, Transcript of PBX homeobox 1, humanhuman

TSL 5 BASIC

Gene PBX1, Length 3,225 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PBX1-219ENST00000560641 MIGA2Q7L4E1 593 aa17.21■□□□□ 0.35
PBX1-219ENST00000560641 LONP2Q86WA8 852 aa17.21■□□□□ 0.35
PBX1-219ENST00000560641 MAIP1Q8WWC4 291 aa17.21■□□□□ 0.35
PBX1-219ENST00000560641 HAPLN3Q96S86 360 aa17.21■□□□□ 0.35
PBX1-219ENST00000560641 KIAA1683Q9H0B3 1180 aa17.21■□□□□ 0.35
PBX1-219ENST00000560641 RTCBQ9Y3I0 505 aaKnown RBP17.21■□□□□ 0.35
PBX1-219ENST00000560641 POTEMA6NI47 508 aa17.21■□□□□ 0.34
PBX1-219ENST00000560641 MARK3P27448 753 aa17.21■□□□□ 0.34
PBX1-219ENST00000560641 FOXN2P32314 431 aa17.21■□□□□ 0.34
PBX1-219ENST00000560641 DENND1AQ8TEH3 1009 aa17.21■□□□□ 0.34
PBX1-219ENST00000560641 GPR88Q9GZN0 384 aa17.21■□□□□ 0.34
PBX1-219ENST00000560641 WNT8AQ9H1J5 351 aa17.21■□□□□ 0.34
PBX1-219ENST00000560641 ABCA3Q99758 1704 aa17.2■□□□□ 0.34
PBX1-219ENST00000560641 KLRF2D3W0D1 207 aa17.2■□□□□ 0.34
PBX1-219ENST00000560641 CALUO43852 315 aaPredicted RBP17.2■□□□□ 0.34
PBX1-219ENST00000560641 KIF22Q14807 665 aa17.2■□□□□ 0.34
PBX1-219ENST00000560641 SOGA3Q5TF21 947 aa17.2■□□□□ 0.34
PBX1-219ENST00000560641 RNF220Q5VTB9 566 aa17.2■□□□□ 0.34
PBX1-219ENST00000560641 LARGE2Q8N3Y3 721 aa17.2■□□□□ 0.34
PBX1-219ENST00000560641 C10orf82Q8WW14 230 aa17.2■□□□□ 0.34
PBX1-219ENST00000560641 ERP27Q96DN0 273 aa17.2■□□□□ 0.34
PBX1-219ENST00000560641 TMEM47Q9BQJ4 181 aa17.2■□□□□ 0.34
PBX1-219ENST00000560641 MMADHCQ9H3L0 296 aaPredicted RBP17.2■□□□□ 0.34
PBX1-219ENST00000560641 RIOX1Q9H6W3 641 aa17.2■□□□□ 0.34
PBX1-219ENST00000560641 NKIRAS1Q9NYS0 192 aa17.2■□□□□ 0.34
PBX1-219ENST00000560641 COG5Q9UP83 839 aa17.2■□□□□ 0.34
PBX1-219ENST00000560641 CDH16O75309 829 aa17.2■□□□□ 0.34
PBX1-219ENST00000560641 TJP3O95049 919 aa17.2■□□□□ 0.34
PBX1-219ENST00000560641 GH1P01241 217 aa17.2■□□□□ 0.34
PBX1-219ENST00000560641 ABHD2P08910 425 aa17.2■□□□□ 0.34
PBX1-219ENST00000560641 CYP2D6P10635 497 aa17.2■□□□□ 0.34
PBX1-219ENST00000560641 PIM1P11309 404 aaPredicted RBP17.2■□□□□ 0.34
PBX1-219ENST00000560641 RFX1P22670 979 aa17.2■□□□□ 0.34
PBX1-219ENST00000560641 ENOX2Q16206 610 aaKnown RBP17.2■□□□□ 0.34
PBX1-219ENST00000560641 KNOP1Q1ED39 458 aaKnown RBP17.2■□□□□ 0.34
PBX1-219ENST00000560641 MUM1Q2TAK8 710 aa17.2■□□□□ 0.34
PBX1-219ENST00000560641 SUPT20HQ8NEM7 779 aa17.2■□□□□ 0.34
PBX1-219ENST00000560641 TUBB6Q9BUF5 446 aa17.2■□□□□ 0.34
PBX1-219ENST00000560641 MKNK2Q9HBH9 465 aa17.2■□□□□ 0.34
PBX1-219ENST00000560641 RBBP6Q7Z6E9 1792 aaKnown RBP17.2■□□□□ 0.34
PBX1-219ENST00000560641 PDHA1P08559 390 aa17.19■□□□□ 0.34
PBX1-219ENST00000560641 IL2RBP14784 551 aa17.19■□□□□ 0.34
PBX1-219ENST00000560641 CYP11B2P19099 503 aa17.19■□□□□ 0.34
PBX1-219ENST00000560641 ZRSR2Q15696 482 aaKnown RBP17.19■□□□□ 0.34
PBX1-219ENST00000560641 CTC1Q2NKJ3 1217 aa17.19■□□□□ 0.34
PBX1-219ENST00000560641 PHC3Q8NDX5 983 aa17.19■□□□□ 0.34
PBX1-219ENST00000560641 ALG6Q9Y672 507 aa17.19■□□□□ 0.34
PBX1-219ENST00000560641 ANKRD63C9JTQ0 380 aa17.19■□□□□ 0.34
PBX1-219ENST00000560641 KRT13P13646 458 aa17.19■□□□□ 0.34
PBX1-219ENST00000560641 HOXD13P35453 343 aa17.19■□□□□ 0.34
PBX1-219ENST00000560641 COPB2P35606 906 aa17.19■□□□□ 0.34
PBX1-219ENST00000560641 MAGEA8P43361 318 aa17.19■□□□□ 0.34
PBX1-219ENST00000560641 CLK2P49760 499 aaKnown RBP17.19■□□□□ 0.34
PBX1-219ENST00000560641 MECOMQ03112 1051 aa17.19■□□□□ 0.34
PBX1-219ENST00000560641 AP1B1Q10567 949 aa17.19■□□□□ 0.34
PBX1-219ENST00000560641 PTPROQ16827 1216 aa17.19■□□□□ 0.34
PBX1-219ENST00000560641 LRRC23Q53EV4 343 aaPredicted RBP17.19■□□□□ 0.34
PBX1-219ENST00000560641 SAMD1Q6SPF0 538 aaPredicted RBP17.19■□□□□ 0.34
PBX1-219ENST00000560641 FBXO33Q7Z6M2 555 aa17.19■□□□□ 0.34
PBX1-219ENST00000560641 VSIG1Q86XK7 387 aa17.19■□□□□ 0.34
PBX1-219ENST00000560641 DNAAF5Q86Y56 855 aa17.19■□□□□ 0.34
PBX1-219ENST00000560641 TDRPQ86YL5 185 aa17.19■□□□□ 0.34
PBX1-219ENST00000560641 LRRC8CQ8TDW0 803 aa17.19■□□□□ 0.34
PBX1-219ENST00000560641 HAS1Q92839 578 aa17.19■□□□□ 0.34
PBX1-219ENST00000560641 NAP1L4Q99733 375 aaKnown RBP17.19■□□□□ 0.34
PBX1-219ENST00000560641 PAIP2Q9BPZ3 127 aaKnown RBP17.19■□□□□ 0.34
PBX1-219ENST00000560641 CCDC113Q9H0I3 377 aa17.19■□□□□ 0.34
PBX1-219ENST00000560641 LMCD1Q9NZU5 365 aa17.19■□□□□ 0.34
PBX1-219ENST00000560641 TMCO1Q9UM00 188 aa17.19■□□□□ 0.34
PBX1-219ENST00000560641 PLCG2P16885 1265 aa17.19■□□□□ 0.34
PBX1-219ENST00000560641 SLC12A3P55017 1021 aa17.19■□□□□ 0.34
PBX1-219ENST00000560641 ANKRD35Q8N283 1001 aa17.19■□□□□ 0.34
PBX1-219ENST00000560641 ARHGEF26Q96DR7 871 aa17.19■□□□□ 0.34
PBX1-219ENST00000560641 MTUS1Q9ULD2 1270 aa17.19■□□□□ 0.34
PBX1-219ENST00000560641 DYNC1LI1Q9Y6G9 523 aaKnown RBP17.19■□□□□ 0.34
PBX1-219ENST00000560641 EDF1O60869 148 aaKnown RBP17.18■□□□□ 0.34
PBX1-219ENST00000560641 PARP10Q53GL7 1025 aa17.18■□□□□ 0.34
PBX1-219ENST00000560641 TMEM63BQ5T3F8 832 aa17.18■□□□□ 0.34
PBX1-219ENST00000560641 STKLD1Q8NE28 680 aa17.18■□□□□ 0.34
PBX1-219ENST00000560641 MGARPQ8TDB4 240 aa17.18■□□□□ 0.34
PBX1-219ENST00000560641 VTI1AQ96AJ9 217 aa17.18■□□□□ 0.34
PBX1-219ENST00000560641 KANSL2Q9H9L4 492 aa17.18■□□□□ 0.34
PBX1-219ENST00000560641 TYW1Q9NV66 732 aaKnown RBP17.18■□□□□ 0.34
PBX1-219ENST00000560641 IL1RAPL1Q9NZN1 696 aa17.18■□□□□ 0.34
PBX1-219ENST00000560641 GCNT4Q9P109 453 aa17.18■□□□□ 0.34
PBX1-219ENST00000560641 ZNF212Q9UDV6 495 aa17.18■□□□□ 0.34
PBX1-219ENST00000560641 HAO1Q9UJM8 370 aa17.18■□□□□ 0.34
PBX1-219ENST00000560641 GMEB1Q9Y692 573 aa17.18■□□□□ 0.34
PBX1-219ENST00000560641 SNED1Q8TER0 1413 aa17.18■□□□□ 0.34
PBX1-219ENST00000560641 C2CD2LO14523 706 aa17.18■□□□□ 0.34
PBX1-219ENST00000560641 PLA2G4BP0C869 781 aa17.18■□□□□ 0.34
PBX1-219ENST00000560641 TARSP26639 723 aaKnown RBP17.18■□□□□ 0.34
PBX1-219ENST00000560641 SF3A3Q12874 501 aaKnown RBP eCLIP17.18■□□□□ 0.34
PBX1-219ENST00000560641 CALCOCO2Q13137 446 aa17.18■□□□□ 0.34
PBX1-219ENST00000560641 STAT4Q14765 748 aa17.18■□□□□ 0.34
PBX1-219ENST00000560641 RASA2Q15283 850 aa17.18■□□□□ 0.34
PBX1-219ENST00000560641 SLC13A5Q86YT5 568 aaPredicted RBP17.18■□□□□ 0.34
PBX1-219ENST00000560641 SLC17A8Q8NDX2 589 aa17.18■□□□□ 0.34
PBX1-219ENST00000560641 DDX23Q9BUQ8 820 aaKnown RBP17.18■□□□□ 0.34
PBX1-219ENST00000560641 STX18Q9P2W9 335 aaKnown RBP17.18■□□□□ 0.34
Retrieved 100 of 20,778 RNA–protein pairs in 28.8 ms