RNA–Protein interactions for RNA: ENST00000559996.1

HERC1-206, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase family member 1, humanhuman

TSL 2

Gene HERC1, Length 443 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC1-206ENST00000559996 TRIM43Q96BQ3 446 aaPredicted RBP10.3□□□□□ -0.76
HERC1-206ENST00000559996 HVCN1Q96D96 273 aa10.3□□□□□ -0.76
HERC1-206ENST00000559996 ACCSQ96QU6 501 aa10.3□□□□□ -0.76
HERC1-206ENST00000559996 ACO2Q99798 780 aaKnown RBP10.3□□□□□ -0.76
HERC1-206ENST00000559996 NOC4LQ9BVI4 516 aaKnown RBP10.3□□□□□ -0.76
HERC1-206ENST00000559996 TARS2Q9BW92 718 aaKnown RBP10.3□□□□□ -0.76
HERC1-206ENST00000559996 C2orf40Q9H1Z8 148 aa10.3□□□□□ -0.76
HERC1-206ENST00000559996 TSPY26PQ9H489 355 aa10.3□□□□□ -0.76
HERC1-206ENST00000559996 CBX8Q9HC52 389 aa10.3□□□□□ -0.76
HERC1-206ENST00000559996 RWDD2AQ9UIY3 292 aa10.3□□□□□ -0.76
HERC1-206ENST00000559996 TBX21Q9UL17 535 aa10.3□□□□□ -0.76
HERC1-206ENST00000559996 TRPV2Q9Y5S1 764 aa10.3□□□□□ -0.76
HERC1-206ENST00000559996 UBE4BO95155 1302 aa10.3□□□□□ -0.76
HERC1-206ENST00000559996 CLIC2O15247 247 aa10.29□□□□□ -0.76
HERC1-206ENST00000559996 FAM189A1O60320 539 aa10.29□□□□□ -0.76
HERC1-206ENST00000559996 TSPAN1O60635 241 aa10.29□□□□□ -0.76
HERC1-206ENST00000559996 NBNO60934 754 aa10.29□□□□□ -0.76
HERC1-206ENST00000559996 CAND2O75155 1236 aa10.29□□□□□ -0.76
HERC1-206ENST00000559996 PRKCBP05771 671 aa10.29□□□□□ -0.76
HERC1-206ENST00000559996 ARF4P18085 180 aaPredicted RBP10.29□□□□□ -0.76
HERC1-206ENST00000559996 SCP2P22307 547 aa10.29□□□□□ -0.76
HERC1-206ENST00000559996 ZNF165P49910 485 aa10.29□□□□□ -0.76
HERC1-206ENST00000559996 PAK1Q13153 545 aa10.29□□□□□ -0.76
HERC1-206ENST00000559996 LPIN1Q14693 890 aa10.29□□□□□ -0.76
HERC1-206ENST00000559996 EEF1DP3Q658K8 133 aa10.29□□□□□ -0.76
HERC1-206ENST00000559996 KLHL10Q6JEL2 608 aa10.29□□□□□ -0.76
HERC1-206ENST00000559996 LRRC55Q6ZSA7 311 aa10.29□□□□□ -0.76
HERC1-206ENST00000559996 TSHZ1Q6ZSZ6 1077 aa10.29□□□□□ -0.76
HERC1-206ENST00000559996 RTN4RL1Q86UN2 441 aaPredicted RBP10.29□□□□□ -0.76
HERC1-206ENST00000559996 C12orf56Q8IXR9 622 aa10.29□□□□□ -0.76
HERC1-206ENST00000559996 CAGE1Q8TC20 777 aa10.29□□□□□ -0.76
HERC1-206ENST00000559996 NLRP7Q8WX94 980 aa10.29□□□□□ -0.76
HERC1-206ENST00000559996 GCOM2Q9BZD3 368 aaPredicted RBP10.29□□□□□ -0.76
HERC1-206ENST00000559996 WNT8AQ9H1J5 351 aa10.29□□□□□ -0.76
HERC1-206ENST00000559996 TMX1Q9H3N1 280 aa10.29□□□□□ -0.76
HERC1-206ENST00000559996 TMEM206Q9H813 350 aa10.29□□□□□ -0.76
HERC1-206ENST00000559996 ERVK-5Q9HDB9 667 aa10.29□□□□□ -0.76
HERC1-206ENST00000559996 AGPAT3Q9NRZ7 376 aa10.29□□□□□ -0.76
HERC1-206ENST00000559996 TYW1Q9NV66 732 aaKnown RBP10.29□□□□□ -0.76
HERC1-206ENST00000559996 CTNND2Q9UQB3 1225 aa10.29□□□□□ -0.76
HERC1-206ENST00000559996 SQORQ9Y6N5 450 aa10.29□□□□□ -0.76
HERC1-206ENST00000559996 MROH7Q68CQ1 1323 aa10.29□□□□□ -0.76
HERC1-206ENST00000559996 PHLPP2Q6ZVD8 1323 aa10.29□□□□□ -0.76
HERC1-206ENST00000559996 A0A1B0GUA9 196 aa10.28□□□□□ -0.76
HERC1-206ENST00000559996 FSD2A1L4K1 749 aa10.28□□□□□ -0.76
HERC1-206ENST00000559996 C2orf72A6NCS6 295 aa10.28□□□□□ -0.76
HERC1-206ENST00000559996 DCDC2CA8MYV0 355 aa10.28□□□□□ -0.76
HERC1-206ENST00000559996 H0YCG3 227 aa10.28□□□□□ -0.76
HERC1-206ENST00000559996 INO80B-WBP1J3KQ70 363 aa10.28□□□□□ -0.76
HERC1-206ENST00000559996 IKBKBO14920 756 aa10.28□□□□□ -0.76
HERC1-206ENST00000559996 MEFVO15553 781 aaPredicted RBP10.28□□□□□ -0.76
HERC1-206ENST00000559996 AP5Z1O43299 807 aa10.28□□□□□ -0.76
HERC1-206ENST00000559996 RPLP2P05387 115 aaKnown RBP10.28□□□□□ -0.76
HERC1-206ENST00000559996 CTSHP09668 335 aa10.28□□□□□ -0.76
HERC1-206ENST00000559996 ZNF18P17022 549 aa10.28□□□□□ -0.76
HERC1-206ENST00000559996 PPP1R2P41236 205 aa10.28□□□□□ -0.76
HERC1-206ENST00000559996 PHKA2P46019 1235 aa10.28□□□□□ -0.76
HERC1-206ENST00000559996 DSC3Q14574 896 aa10.28□□□□□ -0.76
HERC1-206ENST00000559996 MAPK6Q16659 721 aa10.28□□□□□ -0.76
HERC1-206ENST00000559996 EDRF1Q3B7T1 1238 aa10.28□□□□□ -0.76
HERC1-206ENST00000559996 UBXN11Q5T124 520 aa10.28□□□□□ -0.76
HERC1-206ENST00000559996 SPATA1Q5VX52 437 aa10.28□□□□□ -0.76
HERC1-206ENST00000559996 CRELD2Q6UXH1 353 aaPredicted RBP10.28□□□□□ -0.76
HERC1-206ENST00000559996 ZPBP2Q6X784 338 aa10.28□□□□□ -0.76
HERC1-206ENST00000559996 RSPH3Q86UC2 560 aa10.28□□□□□ -0.76
HERC1-206ENST00000559996 LUZP1Q86V48 1076 aa10.28□□□□□ -0.76
HERC1-206ENST00000559996 CDR2LQ86X02 465 aaPredicted RBP10.28□□□□□ -0.76
HERC1-206ENST00000559996 SLC9A9Q8IVB4 645 aa10.28□□□□□ -0.76
HERC1-206ENST00000559996 EEF2KMTQ96G04 330 aa10.28□□□□□ -0.76
HERC1-206ENST00000559996 BORCS6Q96GS4 357 aa10.28□□□□□ -0.76
HERC1-206ENST00000559996 CPB2Q96IY4 423 aa10.28□□□□□ -0.76
HERC1-206ENST00000559996 PRIMPOLQ96LW4 560 aa10.28□□□□□ -0.76
HERC1-206ENST00000559996 FBXL18Q96ME1 805 aa10.28□□□□□ -0.76
HERC1-206ENST00000559996 CBWD1Q9BRT8 395 aa10.28□□□□□ -0.76
HERC1-206ENST00000559996 INO80BQ9C086 356 aaPredicted RBP10.28□□□□□ -0.76
HERC1-206ENST00000559996 GBP3Q9H0R5 595 aa10.28□□□□□ -0.76
HERC1-206ENST00000559996 SAMSN1Q9NSI8 373 aaKnown RBP10.28□□□□□ -0.76
HERC1-206ENST00000559996 PRMT7Q9NVM4 692 aaPredicted RBP10.28□□□□□ -0.76
HERC1-206ENST00000559996 ST3GAL5Q9UNP4 418 aa10.28□□□□□ -0.76
HERC1-206ENST00000559996 GINS2Q9Y248 185 aa10.28□□□□□ -0.76
HERC1-206ENST00000559996 TNFSF13BQ9Y275 285 aa10.28□□□□□ -0.76
HERC1-206ENST00000559996 ATP11BQ9Y2G3 1177 aa10.28□□□□□ -0.76
HERC1-206ENST00000559996 TET1Q8NFU7 2136 aa10.28□□□□□ -0.76
HERC1-206ENST00000559996 A0A0B4J269 797 aa10.27□□□□□ -0.77
HERC1-206ENST00000559996 PSMA7O14818 248 aa10.27□□□□□ -0.77
HERC1-206ENST00000559996 KIAA0355O15063 1070 aa10.27□□□□□ -0.77
HERC1-206ENST00000559996 TLR3O15455 904 aaKnown RBP10.27□□□□□ -0.77
HERC1-206ENST00000559996 MGEA5O60502 916 aa10.27□□□□□ -0.77
HERC1-206ENST00000559996 CAVIN2O95810 425 aa10.27□□□□□ -0.77
HERC1-206ENST00000559996 CLTBP09497 229 aa10.27□□□□□ -0.77
HERC1-206ENST00000559996 SELPP16109 830 aa10.27□□□□□ -0.77
HERC1-206ENST00000559996 ABCD1P33897 745 aa10.27□□□□□ -0.77
HERC1-206ENST00000559996 CASP4P49662 377 aa10.27□□□□□ -0.77
HERC1-206ENST00000559996 SNRPFP62306 86 aaKnown RBP10.27□□□□□ -0.77
HERC1-206ENST00000559996 LRRC63Q05C16 580 aa10.27□□□□□ -0.77
HERC1-206ENST00000559996 MCL1Q07820 350 aa10.27□□□□□ -0.77
HERC1-206ENST00000559996 PCBP1Q15365 356 aaKnown RBP eCLIP10.27□□□□□ -0.77
HERC1-206ENST00000559996 CDKAL1Q5VV42 579 aa10.27□□□□□ -0.77
HERC1-206ENST00000559996 APTXQ7Z2E3 356 aaKnown RBP10.27□□□□□ -0.77
HERC1-206ENST00000559996 ZBTB8OSQ8IWT0 167 aa10.27□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 21.2 ms