RNA–Protein interactions for RNA: ENST00000559754.1

SPG11-218, Transcript of SPG11, spatacsin vesicle trafficking associated, humanhuman

APPRIS ALT2 TSL 5

Gene SPG11, Length 411 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPG11-218ENST00000559754 TMPRSS11EQ9UL52 423 aa5.23□□□□□ -1.57
SPG11-218ENST00000559754 CLCA2Q9UQC9 943 aa5.23□□□□□ -1.57
SPG11-218ENST00000559754 TMA7Q9Y2S6 64 aaKnown RBP5.23□□□□□ -1.57
SPG11-218ENST00000559754 TRIM24O15164 1050 aa5.22□□□□□ -1.57
SPG11-218ENST00000559754 STC2O76061 302 aa5.22□□□□□ -1.57
SPG11-218ENST00000559754 CLSTN1O94985 981 aa5.22□□□□□ -1.57
SPG11-218ENST00000559754 CLEC2LP0C7M8 214 aa5.22□□□□□ -1.57
SPG11-218ENST00000559754 HK1P19367 917 aa5.22□□□□□ -1.57
SPG11-218ENST00000559754 SLC25A3Q00325 362 aa5.22□□□□□ -1.57
SPG11-218ENST00000559754 FAM214AQ32MH5 1076 aa5.22□□□□□ -1.57
SPG11-218ENST00000559754 C19orf54Q5BKX5 351 aa5.22□□□□□ -1.57
SPG11-218ENST00000559754 C1QL3Q5VWW1 255 aa5.22□□□□□ -1.57
SPG11-218ENST00000559754 DOK3Q7L591 496 aa5.22□□□□□ -1.57
SPG11-218ENST00000559754 RNF180Q86T96 592 aa5.22□□□□□ -1.57
SPG11-218ENST00000559754 SYNE4Q8N205 404 aa5.22□□□□□ -1.57
SPG11-218ENST00000559754 CHFRQ96EP1 664 aa5.22□□□□□ -1.57
SPG11-218ENST00000559754 FAM193BQ96PV7 902 aaPredicted RBP5.22□□□□□ -1.57
SPG11-218ENST00000559754 MENTQ9BUN1 341 aa5.22□□□□□ -1.57
SPG11-218ENST00000559754 CAAP1Q9H8G2 361 aa5.22□□□□□ -1.57
SPG11-218ENST00000559754 TRPS1Q9UHF7 1281 aa5.22□□□□□ -1.57
SPG11-218ENST00000559754 EVLQ9UI08 416 aaPredicted RBP5.22□□□□□ -1.57
SPG11-218ENST00000559754 CDY2AQ9Y6F7 541 aa5.22□□□□□ -1.57
SPG11-218ENST00000559754 PRR5-ARHGAP8B1AHC4 643 aa5.21□□□□□ -1.58
SPG11-218ENST00000559754 FAM20BO75063 409 aa5.21□□□□□ -1.58
SPG11-218ENST00000559754 HSD3B2P26439 372 aa5.21□□□□□ -1.58
SPG11-218ENST00000559754 UBE3CQ15386 1083 aa5.21□□□□□ -1.58
SPG11-218ENST00000559754 UGT8Q16880 541 aa5.21□□□□□ -1.58
SPG11-218ENST00000559754 IQSEC1Q6DN90 963 aa5.21□□□□□ -1.58
SPG11-218ENST00000559754 HDGFL2Q7Z4V5 671 aaPredicted RBP5.21□□□□□ -1.58
SPG11-218ENST00000559754 THNSL2Q86YJ6 484 aa5.21□□□□□ -1.58
SPG11-218ENST00000559754 SLC41A1Q8IVJ1 513 aa5.21□□□□□ -1.58
SPG11-218ENST00000559754 ULK2Q8IYT8 1036 aa5.21□□□□□ -1.58
SPG11-218ENST00000559754 ZNF276Q8N554 614 aa5.21□□□□□ -1.58
SPG11-218ENST00000559754 MSL3Q8N5Y2 521 aaKnown RBP5.21□□□□□ -1.58
SPG11-218ENST00000559754 LARP4BQ92615 738 aaKnown RBP5.21□□□□□ -1.58
SPG11-218ENST00000559754 LENG9Q96B70 501 aa5.21□□□□□ -1.58
SPG11-218ENST00000559754 CEP89Q96ST8 783 aa5.21□□□□□ -1.58
SPG11-218ENST00000559754 CDC5LQ99459 802 aaKnown RBP5.21□□□□□ -1.58
SPG11-218ENST00000559754 KCTD10Q9H3F6 313 aa5.21□□□□□ -1.58
SPG11-218ENST00000559754 A0A087X1B8 175 aa5.2□□□□□ -1.58
SPG11-218ENST00000559754 TMEM191CA6NGB0 347 aa5.2□□□□□ -1.58
SPG11-218ENST00000559754 NEMP1O14524 444 aa5.2□□□□□ -1.58
SPG11-218ENST00000559754 BRINP1O60477 761 aa5.2□□□□□ -1.58
SPG11-218ENST00000559754 PRAMEF4O60810 478 aa5.2□□□□□ -1.58
SPG11-218ENST00000559754 RPS6KA4O75676 772 aa5.2□□□□□ -1.58
SPG11-218ENST00000559754 CPEP16870 476 aa5.2□□□□□ -1.58
SPG11-218ENST00000559754 LGALS4P56470 323 aa5.2□□□□□ -1.58
SPG11-218ENST00000559754 FAPQ12884 760 aa5.2□□□□□ -1.58
SPG11-218ENST00000559754 STRN3Q13033 797 aa5.2□□□□□ -1.58
SPG11-218ENST00000559754 TRIM25Q14258 630 aaKnown RBP5.2□□□□□ -1.58
SPG11-218ENST00000559754 VPS72Q15906 364 aa5.2□□□□□ -1.58
SPG11-218ENST00000559754 FSCN1Q16658 493 aaKnown RBP5.2□□□□□ -1.58
SPG11-218ENST00000559754 PITRM1Q5JRX3 1037 aa5.2□□□□□ -1.58
SPG11-218ENST00000559754 GJC2Q5T442 439 aaPredicted RBP5.2□□□□□ -1.58
SPG11-218ENST00000559754 PDZD4Q76G19 769 aaPredicted RBP5.2□□□□□ -1.58
SPG11-218ENST00000559754 MRGPRGQ86SM5 289 aa5.2□□□□□ -1.58
SPG11-218ENST00000559754 LYSMD2Q8IV50 215 aa5.2□□□□□ -1.58
SPG11-218ENST00000559754 OR52N2Q8NGI0 321 aa5.2□□□□□ -1.58
SPG11-218ENST00000559754 CHAC2Q8WUX2 184 aa5.2□□□□□ -1.58
SPG11-218ENST00000559754 SNX33Q8WV41 574 aa5.2□□□□□ -1.58
SPG11-218ENST00000559754 RAX2Q96IS3 184 aa5.2□□□□□ -1.58
SPG11-218ENST00000559754 GPRC5BQ9NZH0 403 aa5.2□□□□□ -1.58
SPG11-218ENST00000559754 EIF2B4Q9UI10 523 aaKnown RBP5.2□□□□□ -1.58
SPG11-218ENST00000559754 WDR3Q9UNX4 943 aaKnown RBP eCLIP5.2□□□□□ -1.58
SPG11-218ENST00000559754 SORCS3Q9UPU3 1222 aa5.2□□□□□ -1.58
SPG11-218ENST00000559754 GRXCR1A8MXD5 290 aa5.19□□□□□ -1.58
SPG11-218ENST00000559754 GASTP01350 101 aa5.19□□□□□ -1.58
SPG11-218ENST00000559754 LPLP06858 475 aa5.19□□□□□ -1.58
SPG11-218ENST00000559754 APBA1Q02410 837 aa5.19□□□□□ -1.58
SPG11-218ENST00000559754 CPEB4Q17RY0 729 aaKnown RBP eCLIP5.19□□□□□ -1.58
SPG11-218ENST00000559754 CT83Q5H943 113 aa5.19□□□□□ -1.58
SPG11-218ENST00000559754 CRB2Q5IJ48 1285 aa5.19□□□□□ -1.58
SPG11-218ENST00000559754 CLRN3Q8NCR9 226 aa5.19□□□□□ -1.58
SPG11-218ENST00000559754 CPT1CQ8TCG5 803 aa5.19□□□□□ -1.58
SPG11-218ENST00000559754 DCLRE1CQ96SD1 692 aaKnown RBP5.19□□□□□ -1.58
SPG11-218ENST00000559754 TOPORSQ9NS56 1045 aaPredicted RBP5.19□□□□□ -1.58
SPG11-218ENST00000559754 FZD1Q9UP38 647 aa5.19□□□□□ -1.58
SPG11-218ENST00000559754 CADPSQ9ULU8 1353 aa5.18□□□□□ -1.58
SPG11-218ENST00000559754 B5MCH6 92 aa5.18□□□□□ -1.58
SPG11-218ENST00000559754 RAMP2O60895 175 aa5.18□□□□□ -1.58
SPG11-218ENST00000559754 PHF2O75151 1096 aa5.18□□□□□ -1.58
SPG11-218ENST00000559754 SCAF4O95104 1147 aaKnown RBP5.18□□□□□ -1.58
SPG11-218ENST00000559754 CFBP00751 764 aa5.18□□□□□ -1.58
SPG11-218ENST00000559754 ITGB1P05556 798 aa5.18□□□□□ -1.58
SPG11-218ENST00000559754 ENPP1P22413 925 aa5.18□□□□□ -1.58
SPG11-218ENST00000559754 PDCD1Q15116 288 aa5.18□□□□□ -1.58
SPG11-218ENST00000559754 CT47A1Q5JQC4 288 aaPredicted RBP5.18□□□□□ -1.58
SPG11-218ENST00000559754 LY6G5CQ5SRR4 150 aa5.18□□□□□ -1.58
SPG11-218ENST00000559754 SDE2Q6IQ49 451 aa5.18□□□□□ -1.58
SPG11-218ENST00000559754 FAM180AQ6UWF9 173 aa5.18□□□□□ -1.58
SPG11-218ENST00000559754 MRGPREQ86SM8 312 aa5.18□□□□□ -1.58
SPG11-218ENST00000559754 LDLRAD3Q86YD5 345 aa5.18□□□□□ -1.58
SPG11-218ENST00000559754 EAF2Q96CJ1 260 aaPredicted RBP5.18□□□□□ -1.58
SPG11-218ENST00000559754 NDC1Q9BTX1 674 aa5.18□□□□□ -1.58
SPG11-218ENST00000559754 LSM14BQ9BX40 385 aaKnown RBP5.18□□□□□ -1.58
SPG11-218ENST00000559754 IKZF4Q9H2S9 585 aa5.18□□□□□ -1.58
SPG11-218ENST00000559754 GPRC5DQ9NZD1 345 aa5.18□□□□□ -1.58
SPG11-218ENST00000559754 RPTORQ8N122 1335 aa5.18□□□□□ -1.58
SPG11-218ENST00000559754 DIRC3C9JPN6 131 aa5.17□□□□□ -1.58
SPG11-218ENST00000559754 TMEM127O75204 238 aa5.17□□□□□ -1.58
Retrieved 100 of 20,778 RNA–protein pairs in 105.5 ms