RNA–Protein interactions for RNA: ENST00000558532.1

HERC1-203, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase family member 1, humanhuman

TSL 3

Gene HERC1, Length 581 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC1-203ENST00000558532 APOL3O95236 402 aa3.92□□□□□ -1.78
HERC1-203ENST00000558532 CR2P20023 1033 aa3.92□□□□□ -1.78
HERC1-203ENST00000558532 OCRLQ01968 901 aa3.92□□□□□ -1.78
HERC1-203ENST00000558532 SAFB2Q14151 953 aaKnown RBP eCLIP3.92□□□□□ -1.78
HERC1-203ENST00000558532 SART3Q15020 963 aaKnown RBP3.92□□□□□ -1.78
HERC1-203ENST00000558532 R3HDM1Q15032 1099 aaKnown RBP3.92□□□□□ -1.78
HERC1-203ENST00000558532 TAF7LQ5H9L4 462 aa3.92□□□□□ -1.78
HERC1-203ENST00000558532 GAS2L3Q86XJ1 694 aa3.92□□□□□ -1.78
HERC1-203ENST00000558532 PASD1Q8IV76 773 aa3.92□□□□□ -1.78
HERC1-203ENST00000558532 GPR135Q8IZ08 494 aa3.92□□□□□ -1.78
HERC1-203ENST00000558532 FUKQ8N0W3 1084 aa3.92□□□□□ -1.78
HERC1-203ENST00000558532 AFAP1L2Q8N4X5 818 aa3.92□□□□□ -1.78
HERC1-203ENST00000558532 UBR7Q8N806 425 aa3.92□□□□□ -1.78
HERC1-203ENST00000558532 RPGRQ92834 1020 aaKnown RBP3.92□□□□□ -1.78
HERC1-203ENST00000558532 TRIM44Q96DX7 344 aaPredicted RBP3.92□□□□□ -1.78
HERC1-203ENST00000558532 DYDC2Q96IM9 177 aa3.92□□□□□ -1.78
HERC1-203ENST00000558532 TESK2Q96S53 571 aa3.92□□□□□ -1.78
HERC1-203ENST00000558532 SOX7Q9BT81 388 aa3.92□□□□□ -1.78
HERC1-203ENST00000558532 CCDC94Q9BW85 323 aaPredicted RBP3.92□□□□□ -1.78
HERC1-203ENST00000558532 PLA2G12BQ9BX93 195 aa3.92□□□□□ -1.78
HERC1-203ENST00000558532 GTPBP4Q9BZE4 634 aaKnown RBP3.92□□□□□ -1.78
HERC1-203ENST00000558532 SLKQ9H2G2 1235 aaPredicted RBP3.92□□□□□ -1.78
HERC1-203ENST00000558532 PUF60Q9UHX1 559 aaKnown RBP3.92□□□□□ -1.78
HERC1-203ENST00000558532 DNAI1Q9UI46 699 aa3.92□□□□□ -1.78
HERC1-203ENST00000558532 FAM184BQ9ULE4 1060 aa3.92□□□□□ -1.78
HERC1-203ENST00000558532 ZFR2Q9UPR6 939 aaKnown RBP3.92□□□□□ -1.78
HERC1-203ENST00000558532 SLC30A1Q9Y6M5 507 aa3.92□□□□□ -1.78
HERC1-203ENST00000558532 TTC37Q6PGP7 1564 aa3.92□□□□□ -1.78
HERC1-203ENST00000558532 INO80Q9ULG1 1556 aaPredicted RBP3.92□□□□□ -1.78
HERC1-203ENST00000558532 SPHKAPQ2M3C7 1700 aa3.92□□□□□ -1.78
HERC1-203ENST00000558532 DISP3Q9P2K9 1392 aa3.91□□□□□ -1.78
HERC1-203ENST00000558532 KDM5AP29375 1690 aaKnown RBP3.91□□□□□ -1.78
HERC1-203ENST00000558532 PPRC1Q5VV67 1664 aaKnown RBP3.91□□□□□ -1.78
HERC1-203ENST00000558532 ST20-MTHFSA0A0A6YYL1 179 aa3.91□□□□□ -1.78
HERC1-203ENST00000558532 SLC26A4O43511 780 aa3.91□□□□□ -1.78
HERC1-203ENST00000558532 ZNF623O75123 536 aa3.91□□□□□ -1.78
HERC1-203ENST00000558532 RAD17O75943 681 aa3.91□□□□□ -1.78
HERC1-203ENST00000558532 LETM1O95202 739 aaPredicted RBP3.91□□□□□ -1.78
HERC1-203ENST00000558532 IGHDP01880 384 aa3.91□□□□□ -1.78
HERC1-203ENST00000558532 PFKMP08237 780 aa3.91□□□□□ -1.78
HERC1-203ENST00000558532 VIL1P09327 827 aaKnown RBP3.91□□□□□ -1.78
HERC1-203ENST00000558532 ADCY7P51828 1080 aa3.91□□□□□ -1.78
HERC1-203ENST00000558532 STRN3Q13033 797 aa3.91□□□□□ -1.78
HERC1-203ENST00000558532 ACAP1Q15027 740 aa3.91□□□□□ -1.78
HERC1-203ENST00000558532 DDB1Q16531 1140 aa3.91□□□□□ -1.78
HERC1-203ENST00000558532 KLHL40Q2TBA0 621 aa3.91□□□□□ -1.78
HERC1-203ENST00000558532 ATP13A4Q4VNC1 1196 aa3.91□□□□□ -1.78
HERC1-203ENST00000558532 LCE5AQ5TCM9 118 aa3.91□□□□□ -1.78
HERC1-203ENST00000558532 BROXQ5VW32 411 aa3.91□□□□□ -1.78
HERC1-203ENST00000558532 TAF3Q5VWG9 929 aa3.91□□□□□ -1.78
HERC1-203ENST00000558532 TIGD7Q6NT04 549 aaPredicted RBP3.91□□□□□ -1.78
HERC1-203ENST00000558532 ZNF585AQ6P3V2 769 aa3.91□□□□□ -1.78
HERC1-203ENST00000558532 CXorf67Q86X51 503 aaPredicted RBP3.91□□□□□ -1.78
HERC1-203ENST00000558532 GIMAP8Q8ND71 665 aaPredicted RBP3.91□□□□□ -1.78
HERC1-203ENST00000558532 SLC5A5Q92911 643 aa3.91□□□□□ -1.78
HERC1-203ENST00000558532 DVL3Q92997 716 aaPredicted RBP3.91□□□□□ -1.78
HERC1-203ENST00000558532 KLC2Q9H0B6 622 aa3.91□□□□□ -1.78
HERC1-203ENST00000558532 CAAP1Q9H8G2 361 aa3.91□□□□□ -1.78
HERC1-203ENST00000558532 AGO3Q9H9G7 860 aaKnown RBP3.91□□□□□ -1.78
HERC1-203ENST00000558532 UPF2Q9HAU5 1272 aaKnown RBP3.91□□□□□ -1.78
HERC1-203ENST00000558532 MSL2Q9HCI7 577 aa3.91□□□□□ -1.78
HERC1-203ENST00000558532 SLTMQ9NWH9 1034 aaKnown RBP eCLIP3.91□□□□□ -1.78
HERC1-203ENST00000558532 TMPRSS11EQ9UL52 423 aa3.91□□□□□ -1.78
HERC1-203ENST00000558532 PPP2R3BQ9Y5P8 575 aa3.91□□□□□ -1.78
HERC1-203ENST00000558532 ABCA6Q8N139 1617 aa3.91□□□□□ -1.78
HERC1-203ENST00000558532 MYPNQ86TC9 1320 aa3.91□□□□□ -1.78
HERC1-203ENST00000558532 URB2Q14146 1524 aaKnown RBP3.9□□□□□ -1.78
HERC1-203ENST00000558532 DISP1Q96F81 1524 aa3.9□□□□□ -1.78
HERC1-203ENST00000558532 PRSS38A1L453 326 aa3.9□□□□□ -1.79
HERC1-203ENST00000558532 PMS2P1A4D2B8 440 aa3.9□□□□□ -1.79
HERC1-203ENST00000558532 C1QTNF3-AMACRE9PGA6 284 aa3.9□□□□□ -1.79
HERC1-203ENST00000558532 H2AFYO75367 372 aaKnown RBP3.9□□□□□ -1.79
HERC1-203ENST00000558532 PCDH8O95206 1070 aa3.9□□□□□ -1.79
HERC1-203ENST00000558532 HNRNPLP14866 589 aaKnown RBP eCLIP3.9□□□□□ -1.79
HERC1-203ENST00000558532 POU3F3P20264 500 aaPredicted RBP3.9□□□□□ -1.79
HERC1-203ENST00000558532 LSP1P33241 339 aa3.9□□□□□ -1.79
HERC1-203ENST00000558532 SOX5P35711 763 aa3.9□□□□□ -1.79
HERC1-203ENST00000558532 SELENOPP49908 381 aa3.9□□□□□ -1.79
HERC1-203ENST00000558532 MANFP55145 182 aaKnown RBP3.9□□□□□ -1.79
HERC1-203ENST00000558532 SESN2P58004 480 aaPredicted RBP3.9□□□□□ -1.79
HERC1-203ENST00000558532 ATP2C1P98194 919 aaPredicted RBP3.9□□□□□ -1.79
HERC1-203ENST00000558532 SLC20A2Q08357 652 aa3.9□□□□□ -1.79
HERC1-203ENST00000558532 TCIRG1Q13488 830 aa3.9□□□□□ -1.79
HERC1-203ENST00000558532 SASS6Q6UVJ0 657 aa3.9□□□□□ -1.79
HERC1-203ENST00000558532 Q6ZSN1 163 aa3.9□□□□□ -1.79
HERC1-203ENST00000558532 ESPNLQ6ZVH7 1005 aa3.9□□□□□ -1.79
HERC1-203ENST00000558532 DDX46Q7L014 1031 aaKnown RBP3.9□□□□□ -1.79
HERC1-203ENST00000558532 CLEC14AQ86T13 490 aa3.9□□□□□ -1.79
HERC1-203ENST00000558532 C11orf74Q86VG3 221 aa3.9□□□□□ -1.79
HERC1-203ENST00000558532 CLRN3Q8NCR9 226 aa3.9□□□□□ -1.79
HERC1-203ENST00000558532 SHCBP1Q8NEM2 672 aa3.9□□□□□ -1.79
HERC1-203ENST00000558532 CHST13Q8NET6 341 aa3.9□□□□□ -1.79
HERC1-203ENST00000558532 PPP1R14CQ8TAE6 165 aa3.9□□□□□ -1.79
HERC1-203ENST00000558532 CHAC2Q8WUX2 184 aa3.9□□□□□ -1.79
HERC1-203ENST00000558532 USP7Q93009 1102 aa3.9□□□□□ -1.79
HERC1-203ENST00000558532 LPPQ93052 612 aa3.9□□□□□ -1.79
HERC1-203ENST00000558532 GFM2Q969S9 779 aaKnown RBP3.9□□□□□ -1.79
HERC1-203ENST00000558532 SLC7A6OSQ96CW6 309 aaPredicted RBP3.9□□□□□ -1.79
HERC1-203ENST00000558532 WDR92Q96MX6 357 aa3.9□□□□□ -1.79
HERC1-203ENST00000558532 OR14A2Q96R54 314 aa3.9□□□□□ -1.79
Retrieved 100 of 20,778 RNA–protein pairs in 89.8 ms