RNA–Protein interactions for RNA: ENST00000558321.5

CDC42BPB-202, Transcript of CDC42 binding protein kinase beta, humanhuman

TSL 3

Gene CDC42BPB, Length 528 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42BPB-202ENST00000558321 PPP2R5AQ15172 486 aa13.69□□□□□ -0.22
CDC42BPB-202ENST00000558321 ZRSR1Q15695 479 aaKnown RBP13.69□□□□□ -0.22
CDC42BPB-202ENST00000558321 AMHR2Q16671 573 aa13.69□□□□□ -0.22
CDC42BPB-202ENST00000558321 LARP1BQ659C4 914 aaKnown RBP13.69□□□□□ -0.22
CDC42BPB-202ENST00000558321 SLC27A1Q6PCB7 646 aa13.69□□□□□ -0.22
CDC42BPB-202ENST00000558321 DDX53Q86TM3 631 aaKnown RBP13.69□□□□□ -0.22
CDC42BPB-202ENST00000558321 CDR2LQ86X02 465 aaPredicted RBP13.69□□□□□ -0.22
CDC42BPB-202ENST00000558321 IGSF22Q8N9C0 903 aa13.69□□□□□ -0.22
CDC42BPB-202ENST00000558321 SMG8Q8ND04 991 aaKnown RBP13.69□□□□□ -0.22
CDC42BPB-202ENST00000558321 KHSRPQ92945 711 aaKnown RBP eCLIP13.69□□□□□ -0.22
CDC42BPB-202ENST00000558321 IFT74Q96LB3 600 aa13.69□□□□□ -0.22
CDC42BPB-202ENST00000558321 GAD1Q99259 594 aa13.69□□□□□ -0.22
CDC42BPB-202ENST00000558321 C2orf40Q9H1Z8 148 aa13.69□□□□□ -0.22
CDC42BPB-202ENST00000558321 RNF39Q9H2S5 420 aa13.69□□□□□ -0.22
CDC42BPB-202ENST00000558321 POLD4Q9HCU8 107 aa13.69□□□□□ -0.22
CDC42BPB-202ENST00000558321 EIF4ENIF1Q9NRA8 985 aaKnown RBP13.69□□□□□ -0.22
CDC42BPB-202ENST00000558321 PRMT7Q9NVM4 692 aaPredicted RBP13.69□□□□□ -0.22
CDC42BPB-202ENST00000558321 PLXNA4Q9HCM2 1894 aa13.69□□□□□ -0.22
CDC42BPB-202ENST00000558321 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP13.68□□□□□ -0.22
CDC42BPB-202ENST00000558321 C2orf71A6NGG8 1288 aa13.68□□□□□ -0.22
CDC42BPB-202ENST00000558321 ARL5CA6NH57 179 aa13.68□□□□□ -0.22
CDC42BPB-202ENST00000558321 PP2D1A8MPX8 630 aa13.68□□□□□ -0.22
CDC42BPB-202ENST00000558321 NR1I2O75469 434 aa13.68□□□□□ -0.22
CDC42BPB-202ENST00000558321 MLH1P40692 756 aa13.68□□□□□ -0.22
CDC42BPB-202ENST00000558321 PRPHP41219 470 aa13.68□□□□□ -0.22
CDC42BPB-202ENST00000558321 NAMPTP43490 491 aa13.68□□□□□ -0.22
CDC42BPB-202ENST00000558321 OR1G1P47890 313 aa13.68□□□□□ -0.22
CDC42BPB-202ENST00000558321 MAPK6Q16659 721 aa13.68□□□□□ -0.22
CDC42BPB-202ENST00000558321 TMEM173Q86WV6 379 aaPredicted RBP13.68□□□□□ -0.22
CDC42BPB-202ENST00000558321 SMRP1Q8NCR6 262 aa13.68□□□□□ -0.22
CDC42BPB-202ENST00000558321 VN1R2Q8NFZ6 395 aa13.68□□□□□ -0.22
CDC42BPB-202ENST00000558321 AUTS2Q8WXX7 1259 aa13.68□□□□□ -0.22
CDC42BPB-202ENST00000558321 TMEM175Q9BSA9 504 aa13.68□□□□□ -0.22
CDC42BPB-202ENST00000558321 PARP2Q9UGN5 583 aa13.68□□□□□ -0.22
CDC42BPB-202ENST00000558321 GIT1Q9Y2X7 761 aa13.68□□□□□ -0.22
CDC42BPB-202ENST00000558321 USP15Q9Y4E8 981 aaPredicted RBP13.68□□□□□ -0.22
CDC42BPB-202ENST00000558321 A0A1B0GUA9 196 aa13.67□□□□□ -0.22
CDC42BPB-202ENST00000558321 PI4K2BG5E9Z4 385 aa13.67□□□□□ -0.22
CDC42BPB-202ENST00000558321 NRP1O14786 923 aa13.67□□□□□ -0.22
CDC42BPB-202ENST00000558321 CLASP2O75122 1294 aaKnown RBP13.67□□□□□ -0.22
CDC42BPB-202ENST00000558321 PRKCBP05771 671 aa13.67□□□□□ -0.22
CDC42BPB-202ENST00000558321 ALADP13716 330 aa13.67□□□□□ -0.22
CDC42BPB-202ENST00000558321 AKAP5P24588 427 aa13.67□□□□□ -0.22
CDC42BPB-202ENST00000558321 CDC25AP30304 524 aa13.67□□□□□ -0.22
CDC42BPB-202ENST00000558321 PRPF4BQ13523 1007 aaKnown RBP13.67□□□□□ -0.22
CDC42BPB-202ENST00000558321 GIT2Q14161 759 aa13.67□□□□□ -0.22
CDC42BPB-202ENST00000558321 IL17AQ16552 155 aa13.67□□□□□ -0.22
CDC42BPB-202ENST00000558321 ANKRD54Q6NXT1 300 aa13.67□□□□□ -0.22
CDC42BPB-202ENST00000558321 BCL7CQ8WUZ0 217 aaPredicted RBP13.67□□□□□ -0.22
CDC42BPB-202ENST00000558321 BSNDQ8WZ55 320 aa13.67□□□□□ -0.22
CDC42BPB-202ENST00000558321 KIFAP3Q92845 792 aa13.67□□□□□ -0.22
CDC42BPB-202ENST00000558321 CASP10Q92851 521 aa13.67□□□□□ -0.22
CDC42BPB-202ENST00000558321 PRIMPOLQ96LW4 560 aa13.67□□□□□ -0.22
CDC42BPB-202ENST00000558321 APOL5Q9BWW9 433 aa13.67□□□□□ -0.22
CDC42BPB-202ENST00000558321 FZD8Q9H461 694 aa13.67□□□□□ -0.22
CDC42BPB-202ENST00000558321 NXF3Q9H4D5 531 aaKnown RBP13.67□□□□□ -0.22
CDC42BPB-202ENST00000558321 KLK14Q9P0G3 267 aa13.67□□□□□ -0.22
CDC42BPB-202ENST00000558321 STK39Q9UEW8 545 aa13.67□□□□□ -0.22
CDC42BPB-202ENST00000558321 PRG3Q9Y2Y8 225 aaPredicted RBP13.67□□□□□ -0.22
CDC42BPB-202ENST00000558321 ARID2Q68CP9 1835 aa13.67□□□□□ -0.22
CDC42BPB-202ENST00000558321 NCOR1O75376 2440 aa13.66□□□□□ -0.22
CDC42BPB-202ENST00000558321 C19orf67A6NJJ6 358 aa13.66□□□□□ -0.22
CDC42BPB-202ENST00000558321 E9PMD0 336 aa13.66□□□□□ -0.22
CDC42BPB-202ENST00000558321 N4BP3O15049 544 aa13.66□□□□□ -0.22
CDC42BPB-202ENST00000558321 B4GALT3O60512 393 aa13.66□□□□□ -0.22
CDC42BPB-202ENST00000558321 SSBP05455 408 aaKnown RBP eCLIP13.66□□□□□ -0.22
CDC42BPB-202ENST00000558321 CTSAP10619 480 aa13.66□□□□□ -0.22
CDC42BPB-202ENST00000558321 HOXB8P17481 243 aaPredicted RBP13.66□□□□□ -0.22
CDC42BPB-202ENST00000558321 COL9A1P20849 921 aa13.66□□□□□ -0.22
CDC42BPB-202ENST00000558321 SCNN1GP51170 649 aa13.66□□□□□ -0.22
CDC42BPB-202ENST00000558321 EFNA5P52803 228 aa13.66□□□□□ -0.22
CDC42BPB-202ENST00000558321 FAM187BQ17R55 369 aa13.66□□□□□ -0.22
CDC42BPB-202ENST00000558321 TPRNQ4KMQ1 711 aa13.66□□□□□ -0.22
CDC42BPB-202ENST00000558321 TMEM31Q5JXX7 168 aa13.66□□□□□ -0.22
CDC42BPB-202ENST00000558321 CDCA2Q69YH5 1023 aaPredicted RBP13.66□□□□□ -0.22
CDC42BPB-202ENST00000558321 TMEM184AQ6ZMB5 413 aa13.66□□□□□ -0.22
CDC42BPB-202ENST00000558321 PPP4R3CPQ6ZMV5 832 aa13.66□□□□□ -0.22
CDC42BPB-202ENST00000558321 CDK5RAP3Q96JB5 506 aa13.66□□□□□ -0.22
CDC42BPB-202ENST00000558321 ZFP42Q96MM3 310 aa13.66□□□□□ -0.22
CDC42BPB-202ENST00000558321 RPS6KC1Q96S38 1066 aa13.66□□□□□ -0.22
CDC42BPB-202ENST00000558321 ADPGKQ9BRR6 497 aa13.66□□□□□ -0.22
CDC42BPB-202ENST00000558321 COLEC11Q9BWP8 271 aa13.66□□□□□ -0.22
CDC42BPB-202ENST00000558321 ZBP1Q9H171 429 aa13.66□□□□□ -0.22
CDC42BPB-202ENST00000558321 MIOSQ9NXC5 875 aa13.66□□□□□ -0.22
CDC42BPB-202ENST00000558321 HCFC2Q9Y5Z7 792 aa13.66□□□□□ -0.22
CDC42BPB-202ENST00000558321 ATG2AQ2TAZ0 1938 aa13.66□□□□□ -0.22
CDC42BPB-202ENST00000558321 VWA3AA6NCI4 1184 aa13.65□□□□□ -0.22
CDC42BPB-202ENST00000558321 CCDC169A6NNP5 214 aa13.65□□□□□ -0.22
CDC42BPB-202ENST00000558321 K7ERI5 159 aa13.65□□□□□ -0.22
CDC42BPB-202ENST00000558321 ACKR2O00590 384 aa13.65□□□□□ -0.22
CDC42BPB-202ENST00000558321 ATP2C1P98194 919 aaPredicted RBP13.65□□□□□ -0.22
CDC42BPB-202ENST00000558321 KCNC3Q14003 757 aa13.65□□□□□ -0.22
CDC42BPB-202ENST00000558321 CES5AQ6NT32 575 aa13.65□□□□□ -0.22
CDC42BPB-202ENST00000558321 COLGALT2Q8IYK4 626 aa13.65□□□□□ -0.22
CDC42BPB-202ENST00000558321 RPGRIP1Q96KN7 1286 aa13.65□□□□□ -0.22
CDC42BPB-202ENST00000558321 PLIN2Q99541 437 aa13.65□□□□□ -0.22
CDC42BPB-202ENST00000558321 KIFC3Q9BVG8 833 aa13.65□□□□□ -0.22
CDC42BPB-202ENST00000558321 PHF7Q9BWX1 381 aaPredicted RBP13.65□□□□□ -0.22
CDC42BPB-202ENST00000558321 EMILIN2Q9BXX0 1053 aa13.65□□□□□ -0.22
CDC42BPB-202ENST00000558321 MRPL17Q9NRX2 175 aaKnown RBP13.65□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 19.3 ms