RNA–Protein interactions for RNA: ENST00000557548.1

TRAV28-201, Transcript of T cell receptor alpha variable 28 (pseudogene), humanhuman

BASIC

Gene TRAV28, Length 323 nt, Biotype TR V pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV28-201ENST00000557548 IRX6P78412 446 aaPredicted RBP3.82□□□□□ -1.8
TRAV28-201ENST00000557548 ZNF543Q08ER8 600 aa3.82□□□□□ -1.8
TRAV28-201ENST00000557548 MGAT5Q09328 741 aa3.82□□□□□ -1.8
TRAV28-201ENST00000557548 MGAT2Q10469 447 aa3.82□□□□□ -1.8
TRAV28-201ENST00000557548 NOGQ13253 232 aa3.82□□□□□ -1.8
TRAV28-201ENST00000557548 ELF2Q15723 593 aa3.82□□□□□ -1.8
TRAV28-201ENST00000557548 MSMPQ1L6U9 139 aa3.82□□□□□ -1.8
TRAV28-201ENST00000557548 FAM209BQ5JX69 171 aa3.82□□□□□ -1.8
TRAV28-201ENST00000557548 DGKKQ5KSL6 1271 aa3.82□□□□□ -1.8
TRAV28-201ENST00000557548 THEMIS2Q5TEJ8 643 aa3.82□□□□□ -1.8
TRAV28-201ENST00000557548 WDR78Q5VTH9 848 aa3.82□□□□□ -1.8
TRAV28-201ENST00000557548 IZUMO3Q5VZ72 239 aa3.82□□□□□ -1.8
TRAV28-201ENST00000557548 PPP4R3AQ6IN85 833 aa3.82□□□□□ -1.8
TRAV28-201ENST00000557548 PAQR3Q6TCH7 311 aa3.82□□□□□ -1.8
TRAV28-201ENST00000557548 TEPPQ6URK8 271 aa3.82□□□□□ -1.8
TRAV28-201ENST00000557548 LDHAL6AQ6ZMR3 332 aa3.82□□□□□ -1.8
TRAV28-201ENST00000557548 SPRED2Q7Z698 418 aa3.82□□□□□ -1.8
TRAV28-201ENST00000557548 TTC7BQ86TV6 843 aa3.82□□□□□ -1.8
TRAV28-201ENST00000557548 WFDC3Q8IUB2 231 aa3.82□□□□□ -1.8
TRAV28-201ENST00000557548 GLB1L2Q8IW92 636 aa3.82□□□□□ -1.8
TRAV28-201ENST00000557548 RHOT1Q8IXI2 618 aa3.82□□□□□ -1.8
TRAV28-201ENST00000557548 FAM126BQ8IXS8 530 aa3.82□□□□□ -1.8
TRAV28-201ENST00000557548 DRC7Q8IY82 874 aa3.82□□□□□ -1.8
TRAV28-201ENST00000557548 MYCT1Q8N699 235 aa3.82□□□□□ -1.8
TRAV28-201ENST00000557548 SPATA5Q8NB90 893 aa3.82□□□□□ -1.8
TRAV28-201ENST00000557548 NSUN6Q8TEA1 469 aaKnown RBP3.82□□□□□ -1.8
TRAV28-201ENST00000557548 BCL7CQ8WUZ0 217 aaPredicted RBP3.82□□□□□ -1.8
TRAV28-201ENST00000557548 SLC35A4Q96G79 324 aa3.82□□□□□ -1.8
TRAV28-201ENST00000557548 TOE1Q96GM8 510 aaKnown RBP3.82□□□□□ -1.8
TRAV28-201ENST00000557548 HIST1H2AHQ96KK5 128 aa3.82□□□□□ -1.8
TRAV28-201ENST00000557548 HIST1H2AJQ99878 128 aa3.82□□□□□ -1.8
TRAV28-201ENST00000557548 C7orf25Q9BPX7 421 aa3.82□□□□□ -1.8
TRAV28-201ENST00000557548 FDXACB1Q9BRP7 624 aaPredicted RBP3.82□□□□□ -1.8
TRAV28-201ENST00000557548 AS3MTQ9HBK9 375 aa3.82□□□□□ -1.8
TRAV28-201ENST00000557548 RBM12Q9NTZ6 932 aaKnown RBP3.82□□□□□ -1.8
TRAV28-201ENST00000557548 SAGE1Q9NXZ1 904 aa3.82□□□□□ -1.8
TRAV28-201ENST00000557548 C9orf78Q9NZ63 289 aaPredicted RBP3.82□□□□□ -1.8
TRAV28-201ENST00000557548 PCDHGB2Q9Y5G2 931 aa3.82□□□□□ -1.8
TRAV28-201ENST00000557548 HCFC2Q9Y5Z7 792 aa3.82□□□□□ -1.8
TRAV28-201ENST00000557548 A0A087WV62 115 aa3.81□□□□□ -1.8
TRAV28-201ENST00000557548 hCG_1642624A0A1W2PR95 340 aa3.81□□□□□ -1.8
TRAV28-201ENST00000557548 POM121BA6NF01 834 aa3.81□□□□□ -1.8
TRAV28-201ENST00000557548 FAM171A2A8MVW0 826 aa3.81□□□□□ -1.8
TRAV28-201ENST00000557548 NUDT19A8MXV4 375 aa3.81□□□□□ -1.8
TRAV28-201ENST00000557548 H3BUI4 141 aa3.81□□□□□ -1.8
TRAV28-201ENST00000557548 SLC16A6O15403 523 aa3.81□□□□□ -1.8
TRAV28-201ENST00000557548 MAFGO15525 162 aa3.81□□□□□ -1.8
TRAV28-201ENST00000557548 FRS3O43559 492 aa3.81□□□□□ -1.8
TRAV28-201ENST00000557548 NRP2O60462 931 aa3.81□□□□□ -1.8
TRAV28-201ENST00000557548 ZBTB7AO95365 584 aa3.81□□□□□ -1.8
TRAV28-201ENST00000557548 ENO2P09104 434 aaPredicted RBP3.81□□□□□ -1.8
TRAV28-201ENST00000557548 PNLIPP16233 465 aa3.81□□□□□ -1.8
TRAV28-201ENST00000557548 TSHRP16473 764 aa3.81□□□□□ -1.8
TRAV28-201ENST00000557548 APEX1P27695 318 aaKnown RBP3.81□□□□□ -1.8
TRAV28-201ENST00000557548 GRK6P43250 576 aa3.81□□□□□ -1.8
TRAV28-201ENST00000557548 HK3P52790 923 aa3.81□□□□□ -1.8
TRAV28-201ENST00000557548 MAPK10P53779 464 aa3.81□□□□□ -1.8
TRAV28-201ENST00000557548 NRG3P56975 720 aa3.81□□□□□ -1.8
TRAV28-201ENST00000557548 PFKPQ01813 784 aa3.81□□□□□ -1.8
TRAV28-201ENST00000557548 FOXD4Q12950 439 aaPredicted RBP3.81□□□□□ -1.8
TRAV28-201ENST00000557548 NFATC3Q12968 1075 aa3.81□□□□□ -1.8
TRAV28-201ENST00000557548 PMS2P11Q13670 270 aa3.81□□□□□ -1.8
TRAV28-201ENST00000557548 FGL2Q14314 439 aa3.81□□□□□ -1.8
TRAV28-201ENST00000557548 PLS1Q14651 629 aa3.81□□□□□ -1.8
TRAV28-201ENST00000557548 SEPT2Q15019 361 aa3.81□□□□□ -1.8
TRAV28-201ENST00000557548 CCDC178Q5BJE1 867 aa3.81□□□□□ -1.8
TRAV28-201ENST00000557548 VASNQ6EMK4 673 aa3.81□□□□□ -1.8
TRAV28-201ENST00000557548 CIAPIN1Q6FI81 312 aa3.81□□□□□ -1.8
TRAV28-201ENST00000557548 TMC5Q6UXY8 1006 aa3.81□□□□□ -1.8
TRAV28-201ENST00000557548 LIPIQ6XZB0 460 aa3.81□□□□□ -1.8
TRAV28-201ENST00000557548 HEATR3Q7Z4Q2 680 aa3.81□□□□□ -1.8
TRAV28-201ENST00000557548 SAPCD2Q86UD0 394 aa3.81□□□□□ -1.8
TRAV28-201ENST00000557548 PROSER1Q86XN7 944 aa3.81□□□□□ -1.8
TRAV28-201ENST00000557548 FAM129CQ86XR2 697 aa3.81□□□□□ -1.8
TRAV28-201ENST00000557548 STK11IPQ8N1F8 1099 aa3.81□□□□□ -1.8
TRAV28-201ENST00000557548 SH2D3CQ8N5H7 860 aa3.81□□□□□ -1.8
TRAV28-201ENST00000557548 CCDC33Q8N5R6 958 aa3.81□□□□□ -1.8
TRAV28-201ENST00000557548 TEX19Q8NA77 164 aa3.81□□□□□ -1.8
TRAV28-201ENST00000557548 OR5AN1Q8NGI8 311 aa3.81□□□□□ -1.8
TRAV28-201ENST00000557548 IL31RAQ8NI17 732 aa3.81□□□□□ -1.8
TRAV28-201ENST00000557548 MTFMTQ96DP5 389 aaKnown RBP3.81□□□□□ -1.8
TRAV28-201ENST00000557548 TSPAN17Q96FV3 270 aa3.81□□□□□ -1.8
TRAV28-201ENST00000557548 PTPN18Q99952 460 aa3.81□□□□□ -1.8
TRAV28-201ENST00000557548 SENP7Q9BQF6 1050 aa3.81□□□□□ -1.8
TRAV28-201ENST00000557548 OR10A5Q9H207 317 aa3.81□□□□□ -1.8
TRAV28-201ENST00000557548 KIAA1586Q9HCI6 787 aa3.81□□□□□ -1.8
TRAV28-201ENST00000557548 STARD7Q9NQZ5 370 aa3.81□□□□□ -1.8
TRAV28-201ENST00000557548 LMBRD1Q9NUN5 540 aa3.81□□□□□ -1.8
TRAV28-201ENST00000557548 GALNT8Q9NY28 637 aa3.81□□□□□ -1.8
TRAV28-201ENST00000557548 KCMF1Q9P0J7 381 aa3.81□□□□□ -1.8
TRAV28-201ENST00000557548 NIPSNAP3AQ9UFN0 247 aaPredicted RBP3.81□□□□□ -1.8
TRAV28-201ENST00000557548 MAGEL2Q9UJ55 1249 aa3.81□□□□□ -1.8
TRAV28-201ENST00000557548 WASF3Q9UPY6 502 aa3.81□□□□□ -1.8
TRAV28-201ENST00000557548 SLC5A6Q9Y289 635 aa3.81□□□□□ -1.8
TRAV28-201ENST00000557548 PCDHA3Q9Y5H8 950 aa3.81□□□□□ -1.8
TRAV28-201ENST00000557548 USP19O94966 1318 aa3.8□□□□□ -1.8
TRAV28-201ENST00000557548 A0A1W2PPL8 197 aa3.8□□□□□ -1.8
TRAV28-201ENST00000557548 PHGDHO43175 533 aaKnown RBP3.8□□□□□ -1.8
TRAV28-201ENST00000557548 AKR1B10O60218 316 aa3.8□□□□□ -1.8
TRAV28-201ENST00000557548 TLR5O60602 858 aa3.8□□□□□ -1.8
Retrieved 100 of 20,778 RNA–protein pairs in 40.2 ms