RNA–Protein interactions for RNA: ENST00000557529.1

SHMT2-233, Transcript of serine hydroxymethyltransferase 2, humanhuman

TSL 2

Gene SHMT2, Length 1,369 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT2-233ENST00000557529 SERPING1P05155 500 aa13.57□□□□□ -0.24
SHMT2-233ENST00000557529 PRKCBP05771 671 aa13.57□□□□□ -0.24
SHMT2-233ENST00000557529 ACTN1P12814 892 aa13.57□□□□□ -0.24
SHMT2-233ENST00000557529 PHKA2P46019 1235 aa13.57□□□□□ -0.24
SHMT2-233ENST00000557529 MXI1P50539 228 aa13.57□□□□□ -0.24
SHMT2-233ENST00000557529 CLCN3P51790 818 aa13.57□□□□□ -0.24
SHMT2-233ENST00000557529 LACTBP83111 547 aaPredicted RBP13.57□□□□□ -0.24
SHMT2-233ENST00000557529 CYP24A1Q07973 514 aa13.57□□□□□ -0.24
SHMT2-233ENST00000557529 RAPGEF1Q13905 1077 aa13.57□□□□□ -0.24
SHMT2-233ENST00000557529 GRIK4Q16099 956 aa13.57□□□□□ -0.24
SHMT2-233ENST00000557529 SLC9C1Q4G0N8 1177 aa13.57□□□□□ -0.24
SHMT2-233ENST00000557529 CBWD6Q4V339 395 aa13.57□□□□□ -0.24
SHMT2-233ENST00000557529 CBWD3Q5JTY5 395 aa13.57□□□□□ -0.24
SHMT2-233ENST00000557529 CBWD5Q5RIA9 395 aa13.57□□□□□ -0.24
SHMT2-233ENST00000557529 MFSD14CQ5VZR4 134 aa13.57□□□□□ -0.24
SHMT2-233ENST00000557529 LINC01465Q8N7H1 131 aa13.57□□□□□ -0.24
SHMT2-233ENST00000557529 EHBP1Q8NDI1 1231 aa13.57□□□□□ -0.24
SHMT2-233ENST00000557529 VTI1AQ96AJ9 217 aa13.57□□□□□ -0.24
SHMT2-233ENST00000557529 EIF3CQ99613 913 aaKnown RBP13.57□□□□□ -0.24
SHMT2-233ENST00000557529 FAM213AQ9BRX8 229 aa13.57□□□□□ -0.24
SHMT2-233ENST00000557529 MSTO1Q9BUK6 570 aa13.57□□□□□ -0.24
SHMT2-233ENST00000557529 TARS2Q9BW92 718 aaKnown RBP13.57□□□□□ -0.24
SHMT2-233ENST00000557529 INTS2Q9H0H0 1204 aaKnown RBP13.57□□□□□ -0.24
SHMT2-233ENST00000557529 SIX2Q9NPC8 291 aa13.57□□□□□ -0.24
SHMT2-233ENST00000557529 AIPL1Q9NZN9 384 aa13.57□□□□□ -0.24
SHMT2-233ENST00000557529 AGO2Q9UKV8 859 aaKnown RBP13.57□□□□□ -0.24
SHMT2-233ENST00000557529 PAXBP1Q9Y5B6 917 aa13.57□□□□□ -0.24
SHMT2-233ENST00000557529 SIP14410 1827 aa13.57□□□□□ -0.24
SHMT2-233ENST00000557529 MSCO60682 206 aa13.56□□□□□ -0.24
SHMT2-233ENST00000557529 TOM1L1O75674 476 aa13.56□□□□□ -0.24
SHMT2-233ENST00000557529 F2P00734 622 aa13.56□□□□□ -0.24
SHMT2-233ENST00000557529 AKR1A1P14550 325 aa13.56□□□□□ -0.24
SHMT2-233ENST00000557529 CTGFP29279 349 aa13.56□□□□□ -0.24
SHMT2-233ENST00000557529 MATR3P43243 847 aaKnown RBP eCLIP13.56□□□□□ -0.24
SHMT2-233ENST00000557529 GCLMP48507 274 aa13.56□□□□□ -0.24
SHMT2-233ENST00000557529 PTENP60484 403 aa13.56□□□□□ -0.24
SHMT2-233ENST00000557529 DLG4P78352 724 aa13.56□□□□□ -0.24
SHMT2-233ENST00000557529 PPP3CAQ08209 521 aa13.56□□□□□ -0.24
SHMT2-233ENST00000557529 MAPK8IP2Q13387 824 aaPredicted RBP13.56□□□□□ -0.24
SHMT2-233ENST00000557529 KIF22Q14807 665 aa13.56□□□□□ -0.24
SHMT2-233ENST00000557529 ASIC2Q16515 512 aa13.56□□□□□ -0.24
SHMT2-233ENST00000557529 C1orf220Q5T0J3 134 aa13.56□□□□□ -0.24
SHMT2-233ENST00000557529 KRT39Q6A163 491 aa13.56□□□□□ -0.24
SHMT2-233ENST00000557529 MTHFD1LQ6UB35 978 aa13.56□□□□□ -0.24
SHMT2-233ENST00000557529 IFNLR1Q8IU57 520 aaPredicted RBP13.56□□□□□ -0.24
SHMT2-233ENST00000557529 ZSWIM2Q8NEG5 633 aa13.56□□□□□ -0.24
SHMT2-233ENST00000557529 PARD3BQ8TEW8 1205 aa13.56□□□□□ -0.24
SHMT2-233ENST00000557529 PRIMPOLQ96LW4 560 aa13.56□□□□□ -0.24
SHMT2-233ENST00000557529 MAP7D2Q96T17 732 aa13.56□□□□□ -0.24
SHMT2-233ENST00000557529 DEF6Q9H4E7 631 aa13.56□□□□□ -0.24
SHMT2-233ENST00000557529 TMEM8AQ9HCN3 771 aa13.56□□□□□ -0.24
SHMT2-233ENST00000557529 FHOD1Q9Y613 1164 aa13.56□□□□□ -0.24
SHMT2-233ENST00000557529 BZW2Q9Y6E2 419 aaKnown RBP13.56□□□□□ -0.24
SHMT2-233ENST00000557529 ACKR2O00590 384 aa13.55□□□□□ -0.24
SHMT2-233ENST00000557529 CLDN3O15551 220 aa13.55□□□□□ -0.24
SHMT2-233ENST00000557529 AOC2O75106 756 aa13.55□□□□□ -0.24
SHMT2-233ENST00000557529 ANXA13P27216 316 aa13.55□□□□□ -0.24
SHMT2-233ENST00000557529 EIF4A3P38919 411 aaKnown RBP13.55□□□□□ -0.24
SHMT2-233ENST00000557529 ETF1P62495 437 aaKnown RBP13.55□□□□□ -0.24
SHMT2-233ENST00000557529 CDC42EP1Q00587 391 aa13.55□□□□□ -0.24
SHMT2-233ENST00000557529 PSMD6Q15008 389 aa13.55□□□□□ -0.24
SHMT2-233ENST00000557529 SPA17Q15506 151 aa13.55□□□□□ -0.24
SHMT2-233ENST00000557529 EPC2Q52LR7 807 aa13.55□□□□□ -0.24
SHMT2-233ENST00000557529 ARHGAP29Q52LW3 1261 aa13.55□□□□□ -0.24
SHMT2-233ENST00000557529 ZNF662Q6ZS27 426 aa13.55□□□□□ -0.24
SHMT2-233ENST00000557529 TXLNBQ8N3L3 684 aa13.55□□□□□ -0.24
SHMT2-233ENST00000557529 ACRBPQ8NEB7 543 aa13.55□□□□□ -0.24
SHMT2-233ENST00000557529 KIF18AQ8NI77 898 aa13.55□□□□□ -0.24
SHMT2-233ENST00000557529 PLEKHO2Q8TD55 490 aa13.55□□□□□ -0.24
SHMT2-233ENST00000557529 CCDC127Q96BQ5 260 aa13.55□□□□□ -0.24
SHMT2-233ENST00000557529 NLRP4Q96MN2 994 aa13.55□□□□□ -0.24
SHMT2-233ENST00000557529 CFHR5Q9BXR6 569 aa13.55□□□□□ -0.24
SHMT2-233ENST00000557529 STK33Q9BYT3 514 aa13.55□□□□□ -0.24
SHMT2-233ENST00000557529 TMEM117Q9H0C3 514 aa13.55□□□□□ -0.24
SHMT2-233ENST00000557529 FZD8Q9H461 694 aa13.55□□□□□ -0.24
SHMT2-233ENST00000557529 PRMT7Q9NVM4 692 aaPredicted RBP13.55□□□□□ -0.24
SHMT2-233ENST00000557529 ARHGAP20Q9P2F6 1191 aa13.55□□□□□ -0.24
SHMT2-233ENST00000557529 ANKFY1Q9P2R3 1169 aa13.55□□□□□ -0.24
SHMT2-233ENST00000557529 APEX2Q9UBZ4 518 aa13.55□□□□□ -0.24
SHMT2-233ENST00000557529 AKT3Q9Y243 479 aa13.55□□□□□ -0.24
SHMT2-233ENST00000557529 USP20Q9Y2K6 914 aa13.55□□□□□ -0.24
SHMT2-233ENST00000557529 DOCK3Q8IZD9 2030 aa13.55□□□□□ -0.24
SHMT2-233ENST00000557529 NRCAMQ92823 1304 aa13.54□□□□□ -0.24
SHMT2-233ENST00000557529 LRRIQ3A6PVS8 624 aaPredicted RBP13.54□□□□□ -0.24
SHMT2-233ENST00000557529 INO80B-WBP1J3KQ70 363 aa13.54□□□□□ -0.24
SHMT2-233ENST00000557529 AKR1B10O60218 316 aa13.54□□□□□ -0.24
SHMT2-233ENST00000557529 ZEB2O60315 1214 aa13.54□□□□□ -0.24
SHMT2-233ENST00000557529 KPNA6O60684 536 aa13.54□□□□□ -0.24
SHMT2-233ENST00000557529 DUSP11O75319 330 aaKnown RBP13.54□□□□□ -0.24
SHMT2-233ENST00000557529 LCA5LO95447 670 aa13.54□□□□□ -0.24
SHMT2-233ENST00000557529 CCDC172P0C7W6 258 aa13.54□□□□□ -0.24
SHMT2-233ENST00000557529 FERP16591 822 aa13.54□□□□□ -0.24
SHMT2-233ENST00000557529 STAT1P42224 750 aa13.54□□□□□ -0.24
SHMT2-233ENST00000557529 APLP1P51693 650 aa13.54□□□□□ -0.24
SHMT2-233ENST00000557529 KIF11P52732 1056 aa13.54□□□□□ -0.24
SHMT2-233ENST00000557529 TERF1P54274 439 aa13.54□□□□□ -0.24
SHMT2-233ENST00000557529 JAM2P57087 298 aa13.54□□□□□ -0.24
SHMT2-233ENST00000557529 APBA1Q02410 837 aa13.54□□□□□ -0.24
SHMT2-233ENST00000557529 PRPF4BQ13523 1007 aaKnown RBP13.54□□□□□ -0.24
SHMT2-233ENST00000557529 FAM187BQ17R55 369 aa13.54□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 18.8 ms