RNA–Protein interactions for RNA: ENST00000557470.5

VPS33B-207, Transcript of VPS33B, late endosome and lysosome associated, humanhuman

TSL 5

Gene VPS33B, Length 529 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS33B-207ENST00000557470 AUTS2Q8WXX7 1259 aa6.63□□□□□ -1.35
VPS33B-207ENST00000557470 CDK15Q96Q40 435 aa6.63□□□□□ -1.35
VPS33B-207ENST00000557470 ANO3Q9BYT9 981 aa6.63□□□□□ -1.35
VPS33B-207ENST00000557470 ZBP1Q9H171 429 aa6.63□□□□□ -1.35
VPS33B-207ENST00000557470 ADAMTS10Q9H324 1103 aa6.63□□□□□ -1.35
VPS33B-207ENST00000557470 ZNF302Q9NR11 478 aa6.63□□□□□ -1.35
VPS33B-207ENST00000557470 DZANK1Q9NVP4 752 aa6.63□□□□□ -1.35
VPS33B-207ENST00000557470 CUEDC1Q9NWM3 386 aaPredicted RBP6.63□□□□□ -1.35
VPS33B-207ENST00000557470 DBR1Q9UK59 544 aaKnown RBP6.63□□□□□ -1.35
VPS33B-207ENST00000557470 CEP250Q9BV73 2442 aa6.62□□□□□ -1.35
VPS33B-207ENST00000557470 CNTNAP5Q8WYK1 1306 aa6.62□□□□□ -1.35
VPS33B-207ENST00000557470 FAM86B1E9PN63 330 aa6.62□□□□□ -1.35
VPS33B-207ENST00000557470 DHX15O43143 795 aaKnown RBP6.62□□□□□ -1.35
VPS33B-207ENST00000557470 SGSM2O43147 1006 aa6.62□□□□□ -1.35
VPS33B-207ENST00000557470 CXCL14O95715 111 aa6.62□□□□□ -1.35
VPS33B-207ENST00000557470 ADH1CP00326 375 aa6.62□□□□□ -1.35
VPS33B-207ENST00000557470 FAM86B2P0C5J1 330 aa6.62□□□□□ -1.35
VPS33B-207ENST00000557470 CALM1P0DP23 149 aa6.62□□□□□ -1.35
VPS33B-207ENST00000557470 CALM2P0DP24 149 aa6.62□□□□□ -1.35
VPS33B-207ENST00000557470 CALM3P0DP25 149 aa6.62□□□□□ -1.35
VPS33B-207ENST00000557470 AOC1P19801 751 aa6.62□□□□□ -1.35
VPS33B-207ENST00000557470 SREBF1P36956 1147 aa6.62□□□□□ -1.35
VPS33B-207ENST00000557470 GRM5P41594 1212 aa6.62□□□□□ -1.35
VPS33B-207ENST00000557470 ALDH7A1P49419 539 aaKnown RBP6.62□□□□□ -1.35
VPS33B-207ENST00000557470 METAP2P50579 478 aaKnown RBP eCLIP6.62□□□□□ -1.35
VPS33B-207ENST00000557470 ADCY7P51828 1080 aa6.62□□□□□ -1.35
VPS33B-207ENST00000557470 NAPAP54920 295 aa6.62□□□□□ -1.35
VPS33B-207ENST00000557470 BCAR1P56945 870 aa6.62□□□□□ -1.35
VPS33B-207ENST00000557470 NLRP11P59045 1033 aaKnown RBP6.62□□□□□ -1.35
VPS33B-207ENST00000557470 AAMPQ13685 434 aa6.62□□□□□ -1.35
VPS33B-207ENST00000557470 ANGPT1Q15389 498 aa6.62□□□□□ -1.35
VPS33B-207ENST00000557470 ATAT1Q5SQI0 421 aa6.62□□□□□ -1.35
VPS33B-207ENST00000557470 MIS18BP1Q6P0N0 1132 aa6.62□□□□□ -1.35
VPS33B-207ENST00000557470 TMC5Q6UXY8 1006 aa6.62□□□□□ -1.35
VPS33B-207ENST00000557470 BPHLQ86WA6 291 aaPredicted RBP6.62□□□□□ -1.35
VPS33B-207ENST00000557470 CKAP2LQ8IYA6 745 aa6.62□□□□□ -1.35
VPS33B-207ENST00000557470 CCDC105Q8IYK2 499 aa6.62□□□□□ -1.35
VPS33B-207ENST00000557470 SIX5Q8N196 739 aa6.62□□□□□ -1.35
VPS33B-207ENST00000557470 VPS52Q8N1B4 723 aa6.62□□□□□ -1.35
VPS33B-207ENST00000557470 LINC01465Q8N7H1 131 aa6.62□□□□□ -1.35
VPS33B-207ENST00000557470 FANCBQ8NB91 859 aa6.62□□□□□ -1.35
VPS33B-207ENST00000557470 BCL7CQ8WUZ0 217 aaPredicted RBP6.62□□□□□ -1.35
VPS33B-207ENST00000557470 MAP4K1Q92918 833 aa6.62□□□□□ -1.35
VPS33B-207ENST00000557470 ZNF668Q96K58 619 aaPredicted RBP6.62□□□□□ -1.35
VPS33B-207ENST00000557470 MTA3Q9BTC8 594 aa6.62□□□□□ -1.35
VPS33B-207ENST00000557470 KLF16Q9BXK1 252 aaPredicted RBP6.62□□□□□ -1.35
VPS33B-207ENST00000557470 LRRC2Q9BYS8 371 aa6.62□□□□□ -1.35
VPS33B-207ENST00000557470 RIC8AQ9NPQ8 531 aa6.62□□□□□ -1.35
VPS33B-207ENST00000557470 CYP26B1Q9NR63 512 aa6.62□□□□□ -1.35
VPS33B-207ENST00000557470 AKT3Q9Y243 479 aa6.62□□□□□ -1.35
VPS33B-207ENST00000557470 PPME1Q9Y570 386 aa6.62□□□□□ -1.35
VPS33B-207ENST00000557470 RBM8AQ9Y5S9 174 aaKnown RBP6.62□□□□□ -1.35
VPS33B-207ENST00000557470 EVPLQ92817 2033 aa6.62□□□□□ -1.35
VPS33B-207ENST00000557470 IGLV3-22A0A075B6J6 115 aa6.61□□□□□ -1.35
VPS33B-207ENST00000557470 A0A0U1RQF3 1178 aa6.61□□□□□ -1.35
VPS33B-207ENST00000557470 MED19A0JLT2 244 aaPredicted RBP6.61□□□□□ -1.35
VPS33B-207ENST00000557470 TLDC2A0PJX2 215 aa6.61□□□□□ -1.35
VPS33B-207ENST00000557470 IPO5O00410 1097 aaKnown RBP6.61□□□□□ -1.35
VPS33B-207ENST00000557470 ZC3H11AO75152 810 aaKnown RBP eCLIP6.61□□□□□ -1.35
VPS33B-207ENST00000557470 CSDE1O75534 798 aaKnown RBP6.61□□□□□ -1.35
VPS33B-207ENST00000557470 WFS1O76024 890 aa6.61□□□□□ -1.35
VPS33B-207ENST00000557470 FOSP01100 380 aaPredicted RBP6.61□□□□□ -1.35
VPS33B-207ENST00000557470 DARSP14868 501 aaKnown RBP6.61□□□□□ -1.35
VPS33B-207ENST00000557470 TIMP2P16035 220 aa6.61□□□□□ -1.35
VPS33B-207ENST00000557470 ZSCAN20P17040 1043 aaPredicted RBP6.61□□□□□ -1.35
VPS33B-207ENST00000557470 FGFR4P22455 802 aa6.61□□□□□ -1.35
VPS33B-207ENST00000557470 EIF4BP23588 611 aaKnown RBP6.61□□□□□ -1.35
VPS33B-207ENST00000557470 MCM5P33992 734 aa6.61□□□□□ -1.35
VPS33B-207ENST00000557470 ZNF76P36508 570 aa6.61□□□□□ -1.35
VPS33B-207ENST00000557470 LIFRP42702 1097 aa6.61□□□□□ -1.35
VPS33B-207ENST00000557470 WDR4P57081 412 aaKnown RBP6.61□□□□□ -1.35
VPS33B-207ENST00000557470 TAGLNQ01995 201 aaKnown RBP6.61□□□□□ -1.35
VPS33B-207ENST00000557470 TDGQ13569 410 aa6.61□□□□□ -1.35
VPS33B-207ENST00000557470 EFCAB12Q6NXP0 572 aa6.61□□□□□ -1.35
VPS33B-207ENST00000557470 CCDC149Q6ZUS6 474 aa6.61□□□□□ -1.35
VPS33B-207ENST00000557470 NIPA1Q7RTP0 329 aa6.61□□□□□ -1.35
VPS33B-207ENST00000557470 CABP7Q86V35 215 aa6.61□□□□□ -1.35
VPS33B-207ENST00000557470 MICU3Q86XE3 530 aa6.61□□□□□ -1.35
VPS33B-207ENST00000557470 PLA2G4DQ86XP0 818 aa6.61□□□□□ -1.35
VPS33B-207ENST00000557470 TMTC2Q8N394 836 aa6.61□□□□□ -1.35
VPS33B-207ENST00000557470 LRRC71Q8N4P6 559 aa6.61□□□□□ -1.35
VPS33B-207ENST00000557470 DTWD2Q8NBA8 298 aa6.61□□□□□ -1.35
VPS33B-207ENST00000557470 SLC22A17Q8WUG5 538 aa6.61□□□□□ -1.35
VPS33B-207ENST00000557470 RMDN1Q96DB5 314 aa6.61□□□□□ -1.35
VPS33B-207ENST00000557470 TMEM169Q96HH4 297 aa6.61□□□□□ -1.35
VPS33B-207ENST00000557470 TMEM87BQ96K49 555 aa6.61□□□□□ -1.35
VPS33B-207ENST00000557470 MAP7D2Q96T17 732 aa6.61□□□□□ -1.35
VPS33B-207ENST00000557470 VN1R3Q9BXE9 311 aa6.61□□□□□ -1.35
VPS33B-207ENST00000557470 MRPL9Q9BYD2 267 aaKnown RBP6.61□□□□□ -1.35
VPS33B-207ENST00000557470 SFXN1Q9H9B4 322 aa6.61□□□□□ -1.35
VPS33B-207ENST00000557470 KCNK12Q9HB15 430 aa6.61□□□□□ -1.35
VPS33B-207ENST00000557470 FBXL21Q9UKT6 434 aa6.61□□□□□ -1.35
VPS33B-207ENST00000557470 DUSP12Q9UNI6 340 aa6.61□□□□□ -1.35
VPS33B-207ENST00000557470 WDR3Q9UNX4 943 aaKnown RBP eCLIP6.61□□□□□ -1.35
VPS33B-207ENST00000557470 IRAK3Q9Y616 596 aa6.61□□□□□ -1.35
VPS33B-207ENST00000557470 SLC12A7Q9Y666 1083 aa6.61□□□□□ -1.35
VPS33B-207ENST00000557470 DENND4AQ7Z401 1863 aa6.61□□□□□ -1.35
VPS33B-207ENST00000557470 CACNA1BQ00975 2339 aa6.61□□□□□ -1.35
VPS33B-207ENST00000557470 OTOGLQ3ZCN5 2332 aa6.61□□□□□ -1.35
VPS33B-207ENST00000557470 GPR179Q6PRD1 2367 aa6.6□□□□□ -1.35
Retrieved 100 of 20,778 RNA–protein pairs in 16 ms