RNA–Protein interactions for RNA: ENST00000557285.1

VSX1-207, Transcript of visual system homeobox 1, humanhuman

TSL 3

Gene VSX1, Length 558 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VSX1-207ENST00000557285 PRKCBP05771 671 aa18.29■□□□□ 0.52
VSX1-207ENST00000557285 GALTP07902 379 aa18.29■□□□□ 0.52
VSX1-207ENST00000557285 DUSP6Q16828 381 aa18.29■□□□□ 0.52
VSX1-207ENST00000557285 PUS10Q3MIT2 529 aaKnown RBP18.29■□□□□ 0.52
VSX1-207ENST00000557285 CDCA2Q69YH5 1023 aaPredicted RBP18.29■□□□□ 0.52
VSX1-207ENST00000557285 PDE12Q6L8Q7 609 aaKnown RBP18.29■□□□□ 0.52
VSX1-207ENST00000557285 SLC27A1Q6PCB7 646 aa18.29■□□□□ 0.52
VSX1-207ENST00000557285 KCNK18Q7Z418 384 aa18.29■□□□□ 0.52
VSX1-207ENST00000557285 CNNM3Q8NE01 707 aa18.29■□□□□ 0.52
VSX1-207ENST00000557285 ZFP42Q96MM3 310 aa18.29■□□□□ 0.52
VSX1-207ENST00000557285 C2orf40Q9H1Z8 148 aa18.29■□□□□ 0.52
VSX1-207ENST00000557285 CD320Q9NPF0 282 aa18.29■□□□□ 0.52
VSX1-207ENST00000557285 PRMT7Q9NVM4 692 aaPredicted RBP18.29■□□□□ 0.52
VSX1-207ENST00000557285 KLK14Q9P0G3 267 aa18.29■□□□□ 0.52
VSX1-207ENST00000557285 PARP2Q9UGN5 583 aa18.29■□□□□ 0.52
VSX1-207ENST00000557285 FAM50BQ9Y247 325 aa18.29■□□□□ 0.52
VSX1-207ENST00000557285 TDRD15B5MCY1 1934 aaKnown RBP18.29■□□□□ 0.52
VSX1-207ENST00000557285 BDP1A6H8Y1 2624 aa18.28■□□□□ 0.52
VSX1-207ENST00000557285 ARL5CA6NH57 179 aa18.28■□□□□ 0.52
VSX1-207ENST00000557285 CCDC169A6NNP5 214 aa18.28■□□□□ 0.52
VSX1-207ENST00000557285 EYA4O95677 639 aa18.28■□□□□ 0.52
VSX1-207ENST00000557285 NAMPTP43490 491 aa18.28■□□□□ 0.52
VSX1-207ENST00000557285 SCNN1GP51170 649 aa18.28■□□□□ 0.52
VSX1-207ENST00000557285 RAD51AP2Q09MP3 1159 aa18.28■□□□□ 0.52
VSX1-207ENST00000557285 PRPF4BQ13523 1007 aaKnown RBP18.28■□□□□ 0.52
VSX1-207ENST00000557285 SMC1AQ14683 1233 aaKnown RBP18.28■□□□□ 0.52
VSX1-207ENST00000557285 PPP2R5AQ15172 486 aa18.28■□□□□ 0.52
VSX1-207ENST00000557285 MAPK6Q16659 721 aa18.28■□□□□ 0.52
VSX1-207ENST00000557285 FAM178BQ8IXR5 827 aa18.28■□□□□ 0.52
VSX1-207ENST00000557285 HACE1Q8IYU2 909 aa18.28■□□□□ 0.52
VSX1-207ENST00000557285 VPS52Q8N1B4 723 aa18.28■□□□□ 0.52
VSX1-207ENST00000557285 VN1R2Q8NFZ6 395 aa18.28■□□□□ 0.52
VSX1-207ENST00000557285 IGSF21Q96ID5 467 aa18.28■□□□□ 0.52
VSX1-207ENST00000557285 CDK5RAP3Q96JB5 506 aa18.28■□□□□ 0.52
VSX1-207ENST00000557285 RUSC1Q9BVN2 902 aa18.28■□□□□ 0.52
VSX1-207ENST00000557285 APOL5Q9BWW9 433 aa18.28■□□□□ 0.52
VSX1-207ENST00000557285 NGRNQ9NPE2 291 aaKnown RBP18.28■□□□□ 0.52
VSX1-207ENST00000557285 UBN1Q9NPG3 1134 aa18.28■□□□□ 0.52
VSX1-207ENST00000557285 CLEC1BQ9P126 229 aa18.28■□□□□ 0.52
VSX1-207ENST00000557285 PRG3Q9Y2Y8 225 aaPredicted RBP18.28■□□□□ 0.52
VSX1-207ENST00000557285 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP18.27■□□□□ 0.52
VSX1-207ENST00000557285 MBTPS2O43462 519 aa18.27■□□□□ 0.52
VSX1-207ENST00000557285 HIP1RO75146 1068 aa18.27■□□□□ 0.52
VSX1-207ENST00000557285 CXCL14O95715 111 aa18.27■□□□□ 0.52
VSX1-207ENST00000557285 OR1G1P47890 313 aa18.27■□□□□ 0.52
VSX1-207ENST00000557285 PEX3P56589 373 aa18.27■□□□□ 0.52
VSX1-207ENST00000557285 PPP4R3CPQ6ZMV5 832 aa18.27■□□□□ 0.52
VSX1-207ENST00000557285 TMEM87AQ8NBN3 555 aa18.27■□□□□ 0.52
VSX1-207ENST00000557285 RSPH1Q8WYR4 309 aa18.27■□□□□ 0.52
VSX1-207ENST00000557285 KIFAP3Q92845 792 aa18.27■□□□□ 0.52
VSX1-207ENST00000557285 PDZD7Q9H5P4 517 aa18.27■□□□□ 0.52
VSX1-207ENST00000557285 KANSL3Q9P2N6 904 aa18.27■□□□□ 0.52
VSX1-207ENST00000557285 FAN1Q9Y2M0 1017 aa18.27■□□□□ 0.52
VSX1-207ENST00000557285 A0A1B0GUA9 196 aa18.26■□□□□ 0.51
VSX1-207ENST00000557285 C2orf71A6NGG8 1288 aa18.26■□□□□ 0.51
VSX1-207ENST00000557285 EDN1P05305 212 aa18.26■□□□□ 0.51
VSX1-207ENST00000557285 PDCP20941 246 aa18.26■□□□□ 0.51
VSX1-207ENST00000557285 SMAD4Q13485 552 aaKnown RBP18.26■□□□□ 0.51
VSX1-207ENST00000557285 BMS1Q14692 1282 aaKnown RBP18.26■□□□□ 0.51
VSX1-207ENST00000557285 BRAPQ7Z569 592 aa18.26■□□□□ 0.51
VSX1-207ENST00000557285 CABP7Q86V35 215 aa18.26■□□□□ 0.51
VSX1-207ENST00000557285 GJD3Q8N144 294 aa18.26■□□□□ 0.51
VSX1-207ENST00000557285 PRIMPOLQ96LW4 560 aa18.26■□□□□ 0.51
VSX1-207ENST00000557285 PNMA5Q96PV4 448 aa18.26■□□□□ 0.51
VSX1-207ENST00000557285 CDCA3Q99618 268 aaPredicted RBP18.26■□□□□ 0.51
VSX1-207ENST00000557285 FZD8Q9H461 694 aa18.26■□□□□ 0.51
VSX1-207ENST00000557285 MIOSQ9NXC5 875 aa18.26■□□□□ 0.51
VSX1-207ENST00000557285 MYH11P35749 1972 aa18.25■□□□□ 0.51
VSX1-207ENST00000557285 SFI1A8K8P3 1242 aa18.25■□□□□ 0.51
VSX1-207ENST00000557285 NRP1O14786 923 aa18.25■□□□□ 0.51
VSX1-207ENST00000557285 N4BP3O15049 544 aa18.25■□□□□ 0.51
VSX1-207ENST00000557285 ALDH2P05091 517 aa18.25■□□□□ 0.51
VSX1-207ENST00000557285 SF3A1Q15459 793 aaKnown RBP18.25■□□□□ 0.51
VSX1-207ENST00000557285 ARL6IP4Q66PJ3 421 aaKnown RBP18.25■□□□□ 0.51
VSX1-207ENST00000557285 RINT1Q6NUQ1 792 aa18.25■□□□□ 0.51
VSX1-207ENST00000557285 DDX53Q86TM3 631 aaKnown RBP18.25■□□□□ 0.51
VSX1-207ENST00000557285 MRPL43Q8N983 215 aaKnown RBP18.25■□□□□ 0.51
VSX1-207ENST00000557285 RASSF8Q8NHQ8 419 aa18.25■□□□□ 0.51
VSX1-207ENST00000557285 RABGGTAQ92696 567 aa18.25■□□□□ 0.51
VSX1-207ENST00000557285 KHSRPQ92945 711 aaKnown RBP eCLIP18.25■□□□□ 0.51
VSX1-207ENST00000557285 MSLNLQ96KJ4 702 aa18.25■□□□□ 0.51
VSX1-207ENST00000557285 RPS6KC1Q96S38 1066 aa18.25■□□□□ 0.51
VSX1-207ENST00000557285 ADPGKQ9BRR6 497 aa18.25■□□□□ 0.51
VSX1-207ENST00000557285 CCDC113Q9H0I3 377 aa18.25■□□□□ 0.51
VSX1-207ENST00000557285 ZBP1Q9H171 429 aa18.25■□□□□ 0.51
VSX1-207ENST00000557285 GIT1Q9Y2X7 761 aa18.25■□□□□ 0.51
VSX1-207ENST00000557285 K7ELQ4 463 aaPredicted RBP18.24■□□□□ 0.51
VSX1-207ENST00000557285 ACKR2O00590 384 aa18.24■□□□□ 0.51
VSX1-207ENST00000557285 SRGAP2BP0DMP2 458 aa18.24■□□□□ 0.51
VSX1-207ENST00000557285 SYT1P21579 422 aa18.24■□□□□ 0.51
VSX1-207ENST00000557285 NPTX2P47972 431 aa18.24■□□□□ 0.51
VSX1-207ENST00000557285 CEBPZQ03701 1054 aaKnown RBP18.24■□□□□ 0.51
VSX1-207ENST00000557285 GRIN1Q05586 938 aa18.24■□□□□ 0.51
VSX1-207ENST00000557285 DMP1Q13316 513 aaPredicted RBP18.24■□□□□ 0.51
VSX1-207ENST00000557285 DHX8Q14562 1220 aaKnown RBP18.24■□□□□ 0.51
VSX1-207ENST00000557285 SMAD2Q15796 467 aaKnown RBP18.24■□□□□ 0.51
VSX1-207ENST00000557285 FAM187BQ17R55 369 aa18.24■□□□□ 0.51
VSX1-207ENST00000557285 EEF1DP3Q658K8 133 aa18.24■□□□□ 0.51
VSX1-207ENST00000557285 FAM173BQ6P4H8 233 aa18.24■□□□□ 0.51
VSX1-207ENST00000557285 C1orf186Q6ZWK4 172 aa18.24■□□□□ 0.51
Retrieved 100 of 20,778 RNA–protein pairs in 36.8 ms