RNA–Protein interactions for RNA: ENST00000556548.5

SDR39U1-220, Transcript of short chain dehydrogenase/reductase family 39U member 1, humanhuman

TSL 2

Gene SDR39U1, Length 2,336 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDR39U1-220ENST00000556548 MATR3P43243 847 aaKnown RBP eCLIP19.86■□□□□ 0.77
SDR39U1-220ENST00000556548 ACOT2P49753 483 aa19.86■□□□□ 0.77
SDR39U1-220ENST00000556548 CHMP4BP1P59074 171 aa19.86■□□□□ 0.77
SDR39U1-220ENST00000556548 PLCB4Q15147 1175 aa19.86■□□□□ 0.77
SDR39U1-220ENST00000556548 CST9Q5W186 159 aa19.86■□□□□ 0.77
SDR39U1-220ENST00000556548 LMBRD2Q68DH5 695 aaPredicted RBP19.86■□□□□ 0.77
SDR39U1-220ENST00000556548 TRAPPC11Q7Z392 1133 aa19.86■□□□□ 0.77
SDR39U1-220ENST00000556548 SRGAP1Q7Z6B7 1085 aa19.86■□□□□ 0.77
SDR39U1-220ENST00000556548 GTF3C2Q8WUA4 911 aaPredicted RBP19.86■□□□□ 0.77
SDR39U1-220ENST00000556548 SEMA4DQ92854 862 aa19.86■□□□□ 0.77
SDR39U1-220ENST00000556548 TARS2Q9BW92 718 aaKnown RBP19.86■□□□□ 0.77
SDR39U1-220ENST00000556548 ANKFY1Q9P2R3 1169 aa19.86■□□□□ 0.77
SDR39U1-220ENST00000556548 TRPC6Q9Y210 931 aa19.86■□□□□ 0.77
SDR39U1-220ENST00000556548 SAR1BQ9Y6B6 198 aa19.86■□□□□ 0.77
SDR39U1-220ENST00000556548 UNCXA6NJT0 531 aa19.86■□□□□ 0.77
SDR39U1-220ENST00000556548 H0YCG3 227 aa19.86■□□□□ 0.77
SDR39U1-220ENST00000556548 N4BP1O75113 896 aaKnown RBP19.86■□□□□ 0.77
SDR39U1-220ENST00000556548 FERP16591 822 aa19.86■□□□□ 0.77
SDR39U1-220ENST00000556548 FKBP1BP68106 108 aa19.86■□□□□ 0.77
SDR39U1-220ENST00000556548 CYP24A1Q07973 514 aa19.86■□□□□ 0.77
SDR39U1-220ENST00000556548 FBXO38Q6PIJ6 1188 aa19.86■□□□□ 0.77
SDR39U1-220ENST00000556548 TRIM58Q8NG06 486 aa19.86■□□□□ 0.77
SDR39U1-220ENST00000556548 SCFD2Q8WU76 684 aa19.86■□□□□ 0.77
SDR39U1-220ENST00000556548 HAPLN2Q9GZV7 340 aa19.86■□□□□ 0.77
SDR39U1-220ENST00000556548 ZBTB42B2RXF5 422 aa19.85■□□□□ 0.77
SDR39U1-220ENST00000556548 ZNF185O15231 689 aa19.85■□□□□ 0.77
SDR39U1-220ENST00000556548 LGR5O75473 907 aa19.85■□□□□ 0.77
SDR39U1-220ENST00000556548 GJB1P08034 283 aa19.85■□□□□ 0.77
SDR39U1-220ENST00000556548 HARSP12081 509 aaKnown RBP19.85■□□□□ 0.77
SDR39U1-220ENST00000556548 DPP9Q86TI2 863 aa19.85■□□□□ 0.77
SDR39U1-220ENST00000556548 FBXL18Q96ME1 805 aa19.85■□□□□ 0.77
SDR39U1-220ENST00000556548 PSMB7Q99436 277 aa19.85■□□□□ 0.77
SDR39U1-220ENST00000556548 NAGPAQ9UK23 515 aa19.85■□□□□ 0.77
SDR39U1-220ENST00000556548 TTLL13PA6NNM8 815 aa19.85■□□□□ 0.77
SDR39U1-220ENST00000556548 TMCO5BA8MYB1 307 aa19.85■□□□□ 0.77
SDR39U1-220ENST00000556548 NCK2O43639 380 aa19.85■□□□□ 0.77
SDR39U1-220ENST00000556548 GARTP22102 1010 aa19.85■□□□□ 0.77
SDR39U1-220ENST00000556548 USP8P40818 1118 aa19.85■□□□□ 0.77
SDR39U1-220ENST00000556548 NLRP11P59045 1033 aaKnown RBP19.85■□□□□ 0.77
SDR39U1-220ENST00000556548 MKRN4PQ13434 485 aaPredicted RBP19.85■□□□□ 0.77
SDR39U1-220ENST00000556548 SEZ6Q53EL9 994 aa19.85■□□□□ 0.77
SDR39U1-220ENST00000556548 TAPT1Q6NXT6 567 aa19.85■□□□□ 0.77
SDR39U1-220ENST00000556548 ALKBH5Q6P6C2 394 aaKnown RBP19.85■□□□□ 0.77
SDR39U1-220ENST00000556548 CEP112Q8N8E3 955 aa19.85■□□□□ 0.77
SDR39U1-220ENST00000556548 ATP8B4Q8TF62 1192 aa19.85■□□□□ 0.77
SDR39U1-220ENST00000556548 U2AF1L4Q8WU68 220 aaKnown RBP19.85■□□□□ 0.77
SDR39U1-220ENST00000556548 GOLGA1Q92805 767 aa19.85■□□□□ 0.77
SDR39U1-220ENST00000556548 FAM167AQ96KS9 214 aa19.85■□□□□ 0.77
SDR39U1-220ENST00000556548 MFSD14AQ96MC6 490 aa19.85■□□□□ 0.77
SDR39U1-220ENST00000556548 LUC7LQ9NQ29 371 aaKnown RBP19.85■□□□□ 0.77
SDR39U1-220ENST00000556548 SLC45A1Q9Y2W3 748 aa19.85■□□□□ 0.77
SDR39U1-220ENST00000556548 DDX3XO00571 662 aaKnown RBP eCLIP19.84■□□□□ 0.772e-8■■■■■ 37.8
SDR39U1-220ENST00000556548 ADCYAP1R1P41586 468 aa19.84■□□□□ 0.77
SDR39U1-220ENST00000556548 GCLCP48506 637 aaPredicted RBP19.84■□□□□ 0.77
SDR39U1-220ENST00000556548 IGBP1P78318 339 aa19.84■□□□□ 0.77
SDR39U1-220ENST00000556548 ZBTB41Q5SVQ8 909 aa19.84■□□□□ 0.77
SDR39U1-220ENST00000556548 PAPD7Q5XG87 772 aaKnown RBP19.84■□□□□ 0.77
SDR39U1-220ENST00000556548 RSRC2Q7L4I2 434 aaKnown RBP19.84■□□□□ 0.77
SDR39U1-220ENST00000556548 GPR142Q7Z601 462 aa19.84■□□□□ 0.77
SDR39U1-220ENST00000556548 GLYCTKQ8IVS8 523 aa19.84■□□□□ 0.77
SDR39U1-220ENST00000556548 NOX5Q96PH1 765 aa19.84■□□□□ 0.77
SDR39U1-220ENST00000556548 SEPT11Q9NVA2 429 aaKnown RBP19.84■□□□□ 0.77
SDR39U1-220ENST00000556548 ZNF233A6NK53 670 aa19.84■□□□□ 0.77
SDR39U1-220ENST00000556548 WNT7BP56706 349 aa19.84■□□□□ 0.77
SDR39U1-220ENST00000556548 KRT39Q6A163 491 aa19.84■□□□□ 0.77
SDR39U1-220ENST00000556548 PLPPR4Q7Z2D5 763 aa19.84■□□□□ 0.77
SDR39U1-220ENST00000556548 PPM1KQ8N3J5 372 aa19.84■□□□□ 0.77
SDR39U1-220ENST00000556548 LNX1Q8TBB1 728 aaPredicted RBP19.84■□□□□ 0.77
SDR39U1-220ENST00000556548 TAS1R2Q8TE23 839 aa19.84■□□□□ 0.77
SDR39U1-220ENST00000556548 ALS2CR12Q96Q35 445 aa19.84■□□□□ 0.77
SDR39U1-220ENST00000556548 RNPEPQ9H4A4 650 aa19.84■□□□□ 0.77
SDR39U1-220ENST00000556548 AGO2Q9UKV8 859 aaKnown RBP19.84■□□□□ 0.77
SDR39U1-220ENST00000556548 CENPFP49454 3210 aa19.83■□□□□ 0.77
SDR39U1-220ENST00000556548 C11orf97A0A1B0GVM6 126 aaPredicted RBP19.83■□□□□ 0.76
SDR39U1-220ENST00000556548 P4HA2O15460 535 aa19.83■□□□□ 0.76
SDR39U1-220ENST00000556548 HUNKP57058 714 aa19.83■□□□□ 0.76
SDR39U1-220ENST00000556548 ARHGAP1Q07960 439 aa19.83■□□□□ 0.76
SDR39U1-220ENST00000556548 TUBB2AQ13885 445 aa19.83■□□□□ 0.76
SDR39U1-220ENST00000556548 NAB2Q15742 525 aa19.83■□□□□ 0.76
SDR39U1-220ENST00000556548 WHAMMP3Q1A5X7 153 aa19.83■□□□□ 0.76
SDR39U1-220ENST00000556548 VPS36Q86VN1 386 aa19.83■□□□□ 0.76
SDR39U1-220ENST00000556548 TXLNBQ8N3L3 684 aa19.83■□□□□ 0.76
SDR39U1-220ENST00000556548 TUBB2BQ9BVA1 445 aa19.83■□□□□ 0.76
SDR39U1-220ENST00000556548 CDKN2AIPQ9NXV6 580 aaPredicted RBP19.83■□□□□ 0.76
SDR39U1-220ENST00000556548 MORF4L1Q9UBU8 362 aa19.83■□□□□ 0.76
SDR39U1-220ENST00000556548 EXTL3O43909 919 aa19.82■□□□□ 0.76
SDR39U1-220ENST00000556548 ADCY3O60266 1144 aa19.82■□□□□ 0.76
SDR39U1-220ENST00000556548 CXCR5P32302 372 aa19.82■□□□□ 0.76
SDR39U1-220ENST00000556548 DNA2P51530 1060 aa19.82■□□□□ 0.76
SDR39U1-220ENST00000556548 LAMTOR4Q0VGL1 99 aa19.82■□□□□ 0.76
SDR39U1-220ENST00000556548 SV2AQ7L0J3 742 aa19.82■□□□□ 0.76
SDR39U1-220ENST00000556548 RHPN2Q8IUC4 686 aa19.82■□□□□ 0.76
SDR39U1-220ENST00000556548 METTL13Q8N6R0 699 aa19.82■□□□□ 0.76
SDR39U1-220ENST00000556548 RNF149Q8NC42 400 aa19.82■□□□□ 0.76
SDR39U1-220ENST00000556548 PARK7Q99497 189 aaKnown RBP19.82■□□□□ 0.76
SDR39U1-220ENST00000556548 PI4K2AQ9BTU6 479 aa19.82■□□□□ 0.76
SDR39U1-220ENST00000556548 SMARCAD1Q9H4L7 1026 aa19.82■□□□□ 0.76
SDR39U1-220ENST00000556548 TMEM8AQ9HCN3 771 aa19.82■□□□□ 0.76
SDR39U1-220ENST00000556548 CPA4Q9UI42 421 aa19.82■□□□□ 0.76
SDR39U1-220ENST00000556548 KCNG1Q9UIX4 513 aa19.82■□□□□ 0.76
Retrieved 100 of 20,778 RNA–protein pairs in 28.5 ms