RNA–Protein interactions for RNA: ENST00000556175.1

SDR39U1-216, Transcript of short chain dehydrogenase/reductase family 39U member 1, humanhuman

TSL 3

Gene SDR39U1, Length 775 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDR39U1-216ENST00000556175 NR1I2O75469 434 aa23.96■■□□□ 1.43
SDR39U1-216ENST00000556175 GLRA2P23416 452 aa23.96■■□□□ 1.43
SDR39U1-216ENST00000556175 GUCY1B3Q02153 619 aa23.96■■□□□ 1.43
SDR39U1-216ENST00000556175 CPB2Q96IY4 423 aa23.96■■□□□ 1.43
SDR39U1-216ENST00000556175 NACC1Q96RE7 527 aa23.96■■□□□ 1.43
SDR39U1-216ENST00000556175 EIF2AQ9BY44 585 aaKnown RBP23.96■■□□□ 1.43
SDR39U1-216ENST00000556175 DBR1Q9UK59 544 aaKnown RBP23.96■■□□□ 1.43
SDR39U1-216ENST00000556175 TECTAO75443 2155 aa23.96■■□□□ 1.43
SDR39U1-216ENST00000556175 ARL5CA6NH57 179 aa23.95■■□□□ 1.42
SDR39U1-216ENST00000556175 NRP1O14786 923 aa23.95■■□□□ 1.42
SDR39U1-216ENST00000556175 OR52Z1P0C646 297 aa23.95■■□□□ 1.42
SDR39U1-216ENST00000556175 ARF4P18085 180 aaPredicted RBP23.95■■□□□ 1.42
SDR39U1-216ENST00000556175 HOXD11P31277 338 aaPredicted RBP23.95■■□□□ 1.42
SDR39U1-216ENST00000556175 AFF1P51825 1210 aaKnown RBP23.95■■□□□ 1.42
SDR39U1-216ENST00000556175 SIGLEC14Q08ET2 396 aa23.95■■□□□ 1.42
SDR39U1-216ENST00000556175 GNL2Q13823 731 aaKnown RBP23.95■■□□□ 1.42
SDR39U1-216ENST00000556175 AMHR2Q16671 573 aa23.95■■□□□ 1.42
SDR39U1-216ENST00000556175 PTPN21Q16825 1174 aa23.95■■□□□ 1.42
SDR39U1-216ENST00000556175 ZBTB33Q86T24 672 aa23.95■■□□□ 1.42
SDR39U1-216ENST00000556175 CATSPER3Q86XQ3 398 aa23.95■■□□□ 1.42
SDR39U1-216ENST00000556175 POLR3CQ9BUI4 534 aaPredicted RBP23.95■■□□□ 1.42
SDR39U1-216ENST00000556175 VN1R3Q9BXE9 311 aa23.95■■□□□ 1.42
SDR39U1-216ENST00000556175 SH2B1Q9NRF2 756 aaPredicted RBP23.95■■□□□ 1.42
SDR39U1-216ENST00000556175 MRPL17Q9NRX2 175 aaKnown RBP23.95■■□□□ 1.42
SDR39U1-216ENST00000556175 SSX2IPQ9Y2D8 614 aa23.95■■□□□ 1.42
SDR39U1-216ENST00000556175 GIT1Q9Y2X7 761 aa23.95■■□□□ 1.42
SDR39U1-216ENST00000556175 ZMYM2Q9UBW7 1377 aa23.94■■□□□ 1.42
SDR39U1-216ENST00000556175 SPATA31C1P0DKV0 1188 aa23.94■■□□□ 1.42
SDR39U1-216ENST00000556175 MLH1P40692 756 aa23.94■■□□□ 1.42
SDR39U1-216ENST00000556175 RBM25P49756 843 aaKnown RBP23.94■■□□□ 1.42
SDR39U1-216ENST00000556175 ATAT1Q5SQI0 421 aa23.94■■□□□ 1.42
SDR39U1-216ENST00000556175 RARS2Q5T160 578 aaKnown RBP23.94■■□□□ 1.42
SDR39U1-216ENST00000556175 KIAA1841Q6NSI8 718 aa23.94■■□□□ 1.42
SDR39U1-216ENST00000556175 SLC27A1Q6PCB7 646 aa23.94■■□□□ 1.42
SDR39U1-216ENST00000556175 CABP7Q86V35 215 aa23.94■■□□□ 1.42
SDR39U1-216ENST00000556175 FAM184AQ8NB25 1140 aa23.94■■□□□ 1.42
SDR39U1-216ENST00000556175 FBXO18Q8NFZ0 1043 aa23.94■■□□□ 1.42
SDR39U1-216ENST00000556175 SLC22A17Q8WUG5 538 aa23.94■■□□□ 1.42
SDR39U1-216ENST00000556175 PRIMPOLQ96LW4 560 aa23.94■■□□□ 1.42
SDR39U1-216ENST00000556175 GAD1Q99259 594 aa23.94■■□□□ 1.42
SDR39U1-216ENST00000556175 TSHZ2Q9NRE2 1034 aa23.94■■□□□ 1.42
SDR39U1-216ENST00000556175 SOD2P04179 222 aa23.93■■□□□ 1.42
SDR39U1-216ENST00000556175 URODP06132 367 aa23.93■■□□□ 1.42
SDR39U1-216ENST00000556175 EPCAMP16422 314 aa23.93■■□□□ 1.42
SDR39U1-216ENST00000556175 TRAPPC10P48553 1259 aa23.93■■□□□ 1.42
SDR39U1-216ENST00000556175 HAUS3Q68CZ6 603 aa23.93■■□□□ 1.42
SDR39U1-216ENST00000556175 ZBTB8OSQ8IWT0 167 aa23.93■■□□□ 1.42
SDR39U1-216ENST00000556175 SUGP1Q8IWZ8 645 aaKnown RBP23.93■■□□□ 1.42
SDR39U1-216ENST00000556175 COLGALT2Q8IYK4 626 aa23.93■■□□□ 1.42
SDR39U1-216ENST00000556175 PBXIP1Q96AQ6 731 aa23.93■■□□□ 1.42
SDR39U1-216ENST00000556175 POMKQ9H5K3 350 aa23.93■■□□□ 1.42
SDR39U1-216ENST00000556175 SFXN1Q9H9B4 322 aa23.93■■□□□ 1.42
SDR39U1-216ENST00000556175 PRMT7Q9NVM4 692 aaPredicted RBP23.93■■□□□ 1.42
SDR39U1-216ENST00000556175 NOL7Q9UMY1 257 aaKnown RBP23.93■■□□□ 1.42
SDR39U1-216ENST00000556175 ZNF318Q5VUA4 2279 aa23.93■■□□□ 1.42
SDR39U1-216ENST00000556175 LRRIQ4A6NIV6 560 aa23.92■■□□□ 1.42
SDR39U1-216ENST00000556175 SPDYE4A6NLX3 237 aa23.92■■□□□ 1.42
SDR39U1-216ENST00000556175 MED24O75448 989 aa23.92■■□□□ 1.42
SDR39U1-216ENST00000556175 SSBP05455 408 aaKnown RBP eCLIP23.92■■□□□ 1.42
SDR39U1-216ENST00000556175 KLRC2P26717 231 aa23.92■■□□□ 1.42
SDR39U1-216ENST00000556175 RPA1P27694 616 aa23.92■■□□□ 1.42
SDR39U1-216ENST00000556175 OR1G1P47890 313 aa23.92■■□□□ 1.42
SDR39U1-216ENST00000556175 PPP4R3CPQ6ZMV5 832 aa23.92■■□□□ 1.42
SDR39U1-216ENST00000556175 NOSTRINQ8IVI9 506 aa23.92■■□□□ 1.42
SDR39U1-216ENST00000556175 KLHL5Q96PQ7 755 aa23.92■■□□□ 1.42
SDR39U1-216ENST00000556175 HERC2P3Q9BVR0 1158 aa23.92■■□□□ 1.42
SDR39U1-216ENST00000556175 APOL6Q9BWW8 343 aa23.92■■□□□ 1.42
SDR39U1-216ENST00000556175 C2orf40Q9H1Z8 148 aa23.92■■□□□ 1.42
SDR39U1-216ENST00000556175 RNF39Q9H2S5 420 aa23.92■■□□□ 1.42
SDR39U1-216ENST00000556175 PRG3Q9Y2Y8 225 aaPredicted RBP23.92■■□□□ 1.42
SDR39U1-216ENST00000556175 HES2Q9Y543 173 aa23.92■■□□□ 1.42
SDR39U1-216ENST00000556175 A0A1B0GUA9 196 aa23.91■■□□□ 1.42
SDR39U1-216ENST00000556175 CENPBP07199 599 aaPredicted RBP23.91■■□□□ 1.42
SDR39U1-216ENST00000556175 MUTP22033 750 aa23.91■■□□□ 1.42
SDR39U1-216ENST00000556175 SP100P23497 879 aaPredicted RBP23.91■■□□□ 1.42
SDR39U1-216ENST00000556175 SCNN1GP51170 649 aa23.91■■□□□ 1.42
SDR39U1-216ENST00000556175 DSC1Q08554 894 aa23.91■■□□□ 1.42
SDR39U1-216ENST00000556175 ZNF174Q15697 407 aa23.91■■□□□ 1.42
SDR39U1-216ENST00000556175 TTC38Q5R3I4 469 aa23.91■■□□□ 1.42
SDR39U1-216ENST00000556175 CDCA2Q69YH5 1023 aaPredicted RBP23.91■■□□□ 1.42
SDR39U1-216ENST00000556175 ELMSAN1Q6PJG2 1045 aa23.91■■□□□ 1.42
SDR39U1-216ENST00000556175 FBXL18Q96ME1 805 aa23.91■■□□□ 1.42
SDR39U1-216ENST00000556175 ZFP42Q96MM3 310 aa23.91■■□□□ 1.42
SDR39U1-216ENST00000556175 NXF3Q9H4D5 531 aaKnown RBP23.91■■□□□ 1.42
SDR39U1-216ENST00000556175 GPRC5CQ9NQ84 441 aa23.91■■□□□ 1.42
SDR39U1-216ENST00000556175 MARCH5Q9NX47 278 aa23.91■■□□□ 1.42
SDR39U1-216ENST00000556175 PIEZO1Q92508 2521 aa23.91■■□□□ 1.42
SDR39U1-216ENST00000556175 A0A087WWV3 80 aa23.9■■□□□ 1.42
SDR39U1-216ENST00000556175 ARHGEF35A5YM69 484 aa23.9■■□□□ 1.42
SDR39U1-216ENST00000556175 B4GALT5O43286 388 aa23.9■■□□□ 1.42
SDR39U1-216ENST00000556175 NPTXRO95502 500 aa23.9■■□□□ 1.42
SDR39U1-216ENST00000556175 CNPP09543 421 aaKnown RBP23.9■■□□□ 1.42
SDR39U1-216ENST00000556175 CLCN4P51793 760 aa23.9■■□□□ 1.42
SDR39U1-216ENST00000556175 POTEGQ6S5H5 508 aa23.9■■□□□ 1.42
SDR39U1-216ENST00000556175 MAEAQ7L5Y9 396 aa23.9■■□□□ 1.42
SDR39U1-216ENST00000556175 C12orf76Q8N812 135 aaPredicted RBP23.9■■□□□ 1.42
SDR39U1-216ENST00000556175 TDRD5Q8NAT2 981 aaKnown RBP23.9■■□□□ 1.42
SDR39U1-216ENST00000556175 COLEC11Q9BWP8 271 aa23.9■■□□□ 1.42
SDR39U1-216ENST00000556175 DAXXQ9UER7 740 aaPredicted RBP23.9■■□□□ 1.42
SDR39U1-216ENST00000556175 DPP7Q9UHL4 492 aa23.9■■□□□ 1.42
Retrieved 100 of 20,778 RNA–protein pairs in 42.3 ms