RNA–Protein interactions for RNA: ENST00000555759.1

SYNE3-204, Transcript of spectrin repeat containing nuclear envelope family member 3, humanhuman

TSL 2

Gene SYNE3, Length 5,493 nt, Biotype retained intron.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE3-204ENST00000555759 CCT7Q99832 543 aa18.57■□□□□ 0.56
SYNE3-204ENST00000555759 C7orf25Q9BPX7 421 aa18.57■□□□□ 0.56
SYNE3-204ENST00000555759 CARD9Q9H257 536 aa18.57■□□□□ 0.56
SYNE3-204ENST00000555759 ARSEP51690 589 aa18.57■□□□□ 0.56
SYNE3-204ENST00000555759 MFN1Q8IWA4 741 aa18.57■□□□□ 0.56
SYNE3-204ENST00000555759 ERGIC2Q96RQ1 377 aa18.57■□□□□ 0.56
SYNE3-204ENST00000555759 GTSE1Q9NYZ3 720 aa18.57■□□□□ 0.56
SYNE3-204ENST00000555759 CCPG1Q9ULG6 757 aa18.57■□□□□ 0.56
SYNE3-204ENST00000555759 EME1Q96AY2 570 aa18.57■□□□□ 0.56
SYNE3-204ENST00000555759 FAM149B1Q96BN6 582 aa18.57■□□□□ 0.56
SYNE3-204ENST00000555759 SLC13A1Q9BZW2 595 aa18.57■□□□□ 0.56
SYNE3-204ENST00000555759 BLOC1S6Q9UL45 172 aa18.57■□□□□ 0.56
SYNE3-204ENST00000555759 LEMD3Q9Y2U8 911 aa18.57■□□□□ 0.56
SYNE3-204ENST00000555759 ZHX2Q9Y6X8 837 aa18.57■□□□□ 0.56
SYNE3-204ENST00000555759 PIK3R2O00459 728 aa18.56■□□□□ 0.56
SYNE3-204ENST00000555759 PDXKO00764 312 aa18.56■□□□□ 0.56
SYNE3-204ENST00000555759 TMCC1O94876 653 aa18.56■□□□□ 0.56
SYNE3-204ENST00000555759 METTL13Q8N6R0 699 aa18.56■□□□□ 0.56
SYNE3-204ENST00000555759 SLC35G2Q8TBE7 412 aa18.56■□□□□ 0.56
SYNE3-204ENST00000555759 CEP170P1Q96L14 293 aa18.56■□□□□ 0.56
SYNE3-204ENST00000555759 DNAJC7Q99615 494 aa18.56■□□□□ 0.56
SYNE3-204ENST00000555759 FCER1AP12319 257 aa18.56■□□□□ 0.56
SYNE3-204ENST00000555759 BARGINQ6ZT62 677 aa18.56■□□□□ 0.56
SYNE3-204ENST00000555759 CASKIN2Q8WXE0 1202 aa18.56■□□□□ 0.56
SYNE3-204ENST00000555759 PIK3R5Q8WYR1 880 aa18.56■□□□□ 0.56
SYNE3-204ENST00000555759 SMAPO00193 183 aa18.56■□□□□ 0.56
SYNE3-204ENST00000555759 TAP1Q03518 808 aa18.56■□□□□ 0.56
SYNE3-204ENST00000555759 SLC12A1Q13621 1099 aa18.56■□□□□ 0.56
SYNE3-204ENST00000555759 BTNL9Q6UXG8 535 aa18.56■□□□□ 0.56
SYNE3-204ENST00000555759 DDHD1Q8NEL9 900 aa18.56■□□□□ 0.56
SYNE3-204ENST00000555759 FAM20AQ96MK3 541 aa18.56■□□□□ 0.56
SYNE3-204ENST00000555759 SYNJ2BP-COX16A0A087WUM0 186 aa18.56■□□□□ 0.56
SYNE3-204ENST00000555759 YWHAHQ04917 246 aaPredicted RBP18.56■□□□□ 0.56
SYNE3-204ENST00000555759 KIRREL3Q8IZU9 778 aa18.56■□□□□ 0.56
SYNE3-204ENST00000555759 OR9Q1Q8NGQ5 310 aa18.56■□□□□ 0.56
SYNE3-204ENST00000555759 COX16Q9P0S2 106 aa18.56■□□□□ 0.56
SYNE3-204ENST00000555759 LRRC36Q1X8D7 754 aa18.56■□□□□ 0.56
SYNE3-204ENST00000555759 TMC4Q7Z404 712 aa18.56■□□□□ 0.56
SYNE3-204ENST00000555759 NCAPD2Q15021 1401 aa18.55■□□□□ 0.56
SYNE3-204ENST00000555759 ZNF189O75820 626 aaPredicted RBP18.55■□□□□ 0.56
SYNE3-204ENST00000555759 GALCP54803 685 aa18.55■□□□□ 0.56
SYNE3-204ENST00000555759 STX3Q13277 289 aa18.55■□□□□ 0.56
SYNE3-204ENST00000555759 RCN1Q15293 331 aa18.55■□□□□ 0.56
SYNE3-204ENST00000555759 KCTD1Q719H9 257 aa18.55■□□□□ 0.56
SYNE3-204ENST00000555759 SUPT20HQ8NEM7 779 aa18.55■□□□□ 0.56
SYNE3-204ENST00000555759 SPDYE1Q8NFV5 336 aaPredicted RBP18.55■□□□□ 0.56
SYNE3-204ENST00000555759 STK33Q9BYT3 514 aa18.55■□□□□ 0.56
SYNE3-204ENST00000555759 GCLMP48507 274 aa18.55■□□□□ 0.56
SYNE3-204ENST00000555759 VAMP7P51809 220 aa18.55■□□□□ 0.56
SYNE3-204ENST00000555759 TMTC4Q5T4D3 741 aa18.55■□□□□ 0.56
SYNE3-204ENST00000555759 C11orf70Q9BRQ4 267 aa18.55■□□□□ 0.56
SYNE3-204ENST00000555759 BARHL2Q9NY43 387 aa18.55■□□□□ 0.56
SYNE3-204ENST00000555759 USP6P35125 1406 aa18.55■□□□□ 0.56
SYNE3-204ENST00000555759 MROH7-TTC4A0A0A0MT08 1334 aa18.55■□□□□ 0.56
SYNE3-204ENST00000555759 SLC29A2Q14542 456 aa18.55■□□□□ 0.56
SYNE3-204ENST00000555759 LRRC8EQ6NSJ5 796 aa18.55■□□□□ 0.56
SYNE3-204ENST00000555759 SPAG6O75602 509 aa18.55■□□□□ 0.56
SYNE3-204ENST00000555759 PDHBP11177 359 aa18.55■□□□□ 0.56
SYNE3-204ENST00000555759 CDK17Q00537 523 aa18.55■□□□□ 0.56
SYNE3-204ENST00000555759 GIMAP8Q8ND71 665 aaPredicted RBP18.55■□□□□ 0.56
SYNE3-204ENST00000555759 SNX25Q9H3E2 840 aa18.55■□□□□ 0.56
SYNE3-204ENST00000555759 ATP11BQ9Y2G3 1177 aa18.55■□□□□ 0.56
SYNE3-204ENST00000555759 C15orf41Q9Y2V0 281 aa18.55■□□□□ 0.56
SYNE3-204ENST00000555759 RPS6KA5O75582 802 aa18.54■□□□□ 0.56
SYNE3-204ENST00000555759 TBXAS1P24557 533 aaPredicted RBP18.54■□□□□ 0.56
SYNE3-204ENST00000555759 ARHGAP22Q7Z5H3 698 aa18.54■□□□□ 0.56
SYNE3-204ENST00000555759 SETD3Q86TU7 594 aaPredicted RBP18.54■□□□□ 0.56
SYNE3-204ENST00000555759 NLRP10Q86W26 655 aa18.54■□□□□ 0.56
SYNE3-204ENST00000555759 MSL3Q8N5Y2 521 aaKnown RBP18.54■□□□□ 0.56
SYNE3-204ENST00000555759 NCLNQ969V3 563 aa18.54■□□□□ 0.56
SYNE3-204ENST00000555759 CDHR1Q96JP9 859 aa18.54■□□□□ 0.56
SYNE3-204ENST00000555759 MAGEB18Q96M61 343 aa18.54■□□□□ 0.56
SYNE3-204ENST00000555759 SMARCAL1Q9NZC9 954 aa18.54■□□□□ 0.56
SYNE3-204ENST00000555759 TFAMQ00059 246 aaKnown RBP18.54■□□□□ 0.56
SYNE3-204ENST00000555759 ROR1Q01973 937 aa18.54■□□□□ 0.56
SYNE3-204ENST00000555759 PDIA5Q14554 519 aa18.54■□□□□ 0.56
SYNE3-204ENST00000555759 GRM4Q14833 912 aa18.54■□□□□ 0.56
SYNE3-204ENST00000555759 YTHDF3Q7Z739 585 aaKnown RBP18.54■□□□□ 0.56
SYNE3-204ENST00000555759 MDM1Q8TC05 714 aa18.54■□□□□ 0.56
SYNE3-204ENST00000555759 PI4K2BG5E9Z4 385 aa18.54■□□□□ 0.56
SYNE3-204ENST00000555759 CD58P19256 250 aa18.54■□□□□ 0.56
SYNE3-204ENST00000555759 CTTNQ14247 550 aaKnown RBP18.54■□□□□ 0.56
SYNE3-204ENST00000555759 RMDN2Q96LZ7 410 aa18.54■□□□□ 0.56
SYNE3-204ENST00000555759 ACAP3Q96P50 834 aa18.54■□□□□ 0.56
SYNE3-204ENST00000555759 CYP2D7A0A087X1C5 515 aa18.54■□□□□ 0.56
SYNE3-204ENST00000555759 GOLGA8IPA6NC78 632 aa18.54■□□□□ 0.56
SYNE3-204ENST00000555759 GOLGA8JA6NMD2 632 aa18.54■□□□□ 0.56
SYNE3-204ENST00000555759 TMEM253P0C7T8 217 aa18.54■□□□□ 0.56
SYNE3-204ENST00000555759 SERPINB9P50453 376 aa18.54■□□□□ 0.56
SYNE3-204ENST00000555759 ADCK1Q86TW2 530 aa18.54■□□□□ 0.56
SYNE3-204ENST00000555759 AP5Z1O43299 807 aa18.53■□□□□ 0.56
SYNE3-204ENST00000555759 TYK2P29597 1187 aa18.53■□□□□ 0.56
SYNE3-204ENST00000555759 SWT1Q5T5J6 900 aaKnown RBP18.53■□□□□ 0.56
SYNE3-204ENST00000555759 SERPINB13Q9UIV8 391 aa18.53■□□□□ 0.56
SYNE3-204ENST00000555759 IL6STP40189 918 aaPredicted RBP18.53■□□□□ 0.56
SYNE3-204ENST00000555759 ERVK-24P63145 666 aa18.53■□□□□ 0.56
SYNE3-204ENST00000555759 RHPN2Q8IUC4 686 aa18.53■□□□□ 0.56
SYNE3-204ENST00000555759 CDKL3Q8IVW4 592 aaPredicted RBP18.53■□□□□ 0.56
SYNE3-204ENST00000555759 BTG4Q9NY30 223 aa18.53■□□□□ 0.56
SYNE3-204ENST00000555759 FAM8A1Q9UBU6 413 aa18.53■□□□□ 0.56
Retrieved 100 of 20,778 RNA–protein pairs in 26.3 ms