RNA–Protein interactions for RNA: ENST00000555402.1

VRK1-205, Transcript of vaccinia related kinase 1, humanhuman

TSL 3

Gene VRK1, Length 415 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VRK1-205ENST00000555402 ZNF496Q96IT1 587 aaPredicted RBP7.03□□□□□ -1.28
VRK1-205ENST00000555402 C16orf92Q96LL3 132 aa7.03□□□□□ -1.28
VRK1-205ENST00000555402 C8orf48Q96LL4 319 aa7.03□□□□□ -1.28
VRK1-205ENST00000555402 RTFDC1Q9BY42 306 aaPredicted RBP7.03□□□□□ -1.28
VRK1-205ENST00000555402 SLC13A1Q9BZW2 595 aa7.03□□□□□ -1.28
VRK1-205ENST00000555402 USP36Q9P275 1121 aaKnown RBP7.03□□□□□ -1.28
VRK1-205ENST00000555402 SH3BP1Q9Y3L3 701 aa7.03□□□□□ -1.28
VRK1-205ENST00000555402 RASSF10A6NK89 507 aa7.02□□□□□ -1.29
VRK1-205ENST00000555402 H2AFYO75367 372 aaKnown RBP7.02□□□□□ -1.29
VRK1-205ENST00000555402 APOL3O95236 402 aa7.02□□□□□ -1.29
VRK1-205ENST00000555402 ATF3P18847 181 aa7.02□□□□□ -1.29
VRK1-205ENST00000555402 PROZP22891 400 aa7.02□□□□□ -1.29
VRK1-205ENST00000555402 MC4RP32245 332 aa7.02□□□□□ -1.29
VRK1-205ENST00000555402 RECQLP46063 649 aaPredicted RBP7.02□□□□□ -1.29
VRK1-205ENST00000555402 SCNN1GP51170 649 aa7.02□□□□□ -1.29
VRK1-205ENST00000555402 HERVK_113P62684 666 aa7.02□□□□□ -1.29
VRK1-205ENST00000555402 ACAP2Q15057 778 aa7.02□□□□□ -1.29
VRK1-205ENST00000555402 PDCD1Q15116 288 aa7.02□□□□□ -1.29
VRK1-205ENST00000555402 TMEM200BQ69YZ2 307 aa7.02□□□□□ -1.29
VRK1-205ENST00000555402 PHYKPLQ8IUZ5 450 aa7.02□□□□□ -1.29
VRK1-205ENST00000555402 ANKRD35Q8N283 1001 aa7.02□□□□□ -1.29
VRK1-205ENST00000555402 LMBR1Q8WVP7 490 aa7.02□□□□□ -1.29
VRK1-205ENST00000555402 ASB15Q8WXK1 588 aa7.02□□□□□ -1.29
VRK1-205ENST00000555402 ACAP3Q96P50 834 aa7.02□□□□□ -1.29
VRK1-205ENST00000555402 TUBGCP5Q96RT8 1024 aa7.02□□□□□ -1.29
VRK1-205ENST00000555402 ANO3Q9BYT9 981 aa7.02□□□□□ -1.29
VRK1-205ENST00000555402 NRDE2Q9H7Z3 1164 aa7.02□□□□□ -1.29
VRK1-205ENST00000555402 GEMIN8Q9NWZ8 242 aaKnown RBP7.02□□□□□ -1.29
VRK1-205ENST00000555402 BTBD7Q9P203 1132 aa7.02□□□□□ -1.29
VRK1-205ENST00000555402 GABBR1Q9UBS5 961 aa7.02□□□□□ -1.29
VRK1-205ENST00000555402 FAM184BQ9ULE4 1060 aa7.02□□□□□ -1.29
VRK1-205ENST00000555402 UBA6A0AVT1 1052 aaPredicted RBP7.01□□□□□ -1.29
VRK1-205ENST00000555402 KLHL33A6NCF5 533 aa7.01□□□□□ -1.29
VRK1-205ENST00000555402 PRC1O43663 620 aa7.01□□□□□ -1.29
VRK1-205ENST00000555402 ABLIM3O94929 683 aa7.01□□□□□ -1.29
VRK1-205ENST00000555402 GCP02774 474 aa7.01□□□□□ -1.29
VRK1-205ENST00000555402 RBP3P10745 1247 aa7.01□□□□□ -1.29
VRK1-205ENST00000555402 ECE1P42892 770 aa7.01□□□□□ -1.29
VRK1-205ENST00000555402 GPR3P46089 330 aa7.01□□□□□ -1.29
VRK1-205ENST00000555402 MRPS21P82921 87 aaKnown RBP7.01□□□□□ -1.29
VRK1-205ENST00000555402 RIN1Q13671 783 aa7.01□□□□□ -1.29
VRK1-205ENST00000555402 TIGD7Q6NT04 549 aaPredicted RBP7.01□□□□□ -1.29
VRK1-205ENST00000555402 ESPNLQ6ZVH7 1005 aa7.01□□□□□ -1.29
VRK1-205ENST00000555402 MRGPREQ86SM8 312 aa7.01□□□□□ -1.29
VRK1-205ENST00000555402 E2F7Q96AV8 911 aa7.01□□□□□ -1.29
VRK1-205ENST00000555402 AMNQ9BXJ7 453 aa7.01□□□□□ -1.29
VRK1-205ENST00000555402 DNAJC28Q9NX36 388 aa7.01□□□□□ -1.29
VRK1-205ENST00000555402 PRAMEF22A3QJZ6 481 aa7□□□□□ -1.29
VRK1-205ENST00000555402 KIF3BO15066 747 aa7□□□□□ -1.29
VRK1-205ENST00000555402 NUDT3O95989 172 aa7□□□□□ -1.29
VRK1-205ENST00000555402 CLEC2LP0C7M8 214 aa7□□□□□ -1.29
VRK1-205ENST00000555402 MOGSQ13724 837 aa7□□□□□ -1.29
VRK1-205ENST00000555402 CNGB1Q14028 1251 aaPredicted RBP7□□□□□ -1.29
VRK1-205ENST00000555402 TTC38Q5R3I4 469 aa7□□□□□ -1.29
VRK1-205ENST00000555402 KANK2Q63ZY3 851 aa7□□□□□ -1.29
VRK1-205ENST00000555402 Q6ZRM9 215 aa7□□□□□ -1.29
VRK1-205ENST00000555402 C14orf80Q86SX3 495 aa7□□□□□ -1.29
VRK1-205ENST00000555402 WDR48Q8TAF3 677 aa7□□□□□ -1.29
VRK1-205ENST00000555402 FERMT2Q96AC1 680 aa7□□□□□ -1.29
VRK1-205ENST00000555402 CAMKK2Q96RR4 588 aa7□□□□□ -1.29
VRK1-205ENST00000555402 RHOBTB2Q9BYZ6 727 aa7□□□□□ -1.29
VRK1-205ENST00000555402 POFUT1Q9H488 388 aa7□□□□□ -1.29
VRK1-205ENST00000555402 ANKRD6Q9Y2G4 727 aa7□□□□□ -1.29
VRK1-205ENST00000555402 ASB1Q9Y576 335 aa7□□□□□ -1.29
VRK1-205ENST00000555402 GOLGA6CA6NDK9 693 aa6.99□□□□□ -1.29
VRK1-205ENST00000555402 GOLGA6BA6NDN3 693 aa6.99□□□□□ -1.29
VRK1-205ENST00000555402 TRIM75PA6NK02 468 aa6.99□□□□□ -1.29
VRK1-205ENST00000555402 MPIG6BO95866 241 aa6.99□□□□□ -1.29
VRK1-205ENST00000555402 GOLGA6DP0CG33 693 aa6.99□□□□□ -1.29
VRK1-205ENST00000555402 PF4V1P10720 104 aa6.99□□□□□ -1.29
VRK1-205ENST00000555402 PTGS2P35354 604 aa6.99□□□□□ -1.29
VRK1-205ENST00000555402 TBX4P57082 545 aa6.99□□□□□ -1.29
VRK1-205ENST00000555402 MLC1Q15049 377 aa6.99□□□□□ -1.29
VRK1-205ENST00000555402 CT83Q5H943 113 aa6.99□□□□□ -1.29
VRK1-205ENST00000555402 FAM102BQ5T8I3 360 aa6.99□□□□□ -1.29
VRK1-205ENST00000555402 EFCAB2Q5VUJ9 269 aa6.99□□□□□ -1.29
VRK1-205ENST00000555402 PRAMEF9Q5VWM5 478 aa6.99□□□□□ -1.29
VRK1-205ENST00000555402 MBNL2Q5VZF2 373 aaKnown RBP6.99□□□□□ -1.29
VRK1-205ENST00000555402 LRSAM1Q6UWE0 723 aa6.99□□□□□ -1.29
VRK1-205ENST00000555402 CXorf67Q86X51 503 aaPredicted RBP6.99□□□□□ -1.29
VRK1-205ENST00000555402 CPA6Q8N4T0 437 aa6.99□□□□□ -1.29
VRK1-205ENST00000555402 HAS1Q92839 578 aa6.99□□□□□ -1.29
VRK1-205ENST00000555402 MIEF2Q96C03 454 aa6.99□□□□□ -1.29
VRK1-205ENST00000555402 CCM2LQ9NUG4 571 aaPredicted RBP6.99□□□□□ -1.29
VRK1-205ENST00000555402 UCKL1Q9NWZ5 548 aa6.99□□□□□ -1.29
VRK1-205ENST00000555402 GOLGA6AQ9NYA3 693 aa6.99□□□□□ -1.29
VRK1-205ENST00000555402 GOLGA6L22H0YM25 854 aa6.98□□□□□ -1.29
VRK1-205ENST00000555402 FZD9O00144 591 aa6.98□□□□□ -1.29
VRK1-205ENST00000555402 RFPL1O75677 317 aa6.98□□□□□ -1.29
VRK1-205ENST00000555402 PRPF6O94906 941 aaKnown RBP6.98□□□□□ -1.29
VRK1-205ENST00000555402 RHOBTB3O94955 611 aa6.98□□□□□ -1.29
VRK1-205ENST00000555402 IL33O95760 270 aa6.98□□□□□ -1.29
VRK1-205ENST00000555402 LMNAP02545 664 aaKnown RBP6.98□□□□□ -1.29
VRK1-205ENST00000555402 ENPP1P22413 925 aa6.98□□□□□ -1.29
VRK1-205ENST00000555402 STAT5BP51692 787 aa6.98□□□□□ -1.29
VRK1-205ENST00000555402 SLC6A3Q01959 620 aa6.98□□□□□ -1.29
VRK1-205ENST00000555402 TCIRG1Q13488 830 aa6.98□□□□□ -1.29
VRK1-205ENST00000555402 TOB2Q14106 344 aaPredicted RBP6.98□□□□□ -1.29
VRK1-205ENST00000555402 SAFB2Q14151 953 aaKnown RBP eCLIP6.98□□□□□ -1.29
VRK1-205ENST00000555402 ODF1Q14990 250 aa6.98□□□□□ -1.29
Retrieved 100 of 20,778 RNA–protein pairs in 29.8 ms