RNA–Protein interactions for RNA: ENST00000553866.1

CHGA-203, Transcript of chromogranin A, humanhuman

TSL 3

Gene CHGA, Length 889 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHGA-203ENST00000553866 AAASQ9NRG9 546 aa13.92□□□□□ -0.18
CHGA-203ENST00000553866 TFIP11Q9UBB9 837 aaKnown RBP13.92□□□□□ -0.18
CHGA-203ENST00000553866 CCDC169A6NNP5 214 aa13.91□□□□□ -0.18
CHGA-203ENST00000553866 DLL1O00548 723 aa13.91□□□□□ -0.18
CHGA-203ENST00000553866 ACKR2O00590 384 aa13.91□□□□□ -0.18
CHGA-203ENST00000553866 FSCN2O14926 492 aa13.91□□□□□ -0.18
CHGA-203ENST00000553866 ZC3H11AO75152 810 aaKnown RBP eCLIP13.91□□□□□ -0.18
CHGA-203ENST00000553866 BMP1P13497 986 aa13.91□□□□□ -0.18
CHGA-203ENST00000553866 GUCY2CP25092 1073 aa13.91□□□□□ -0.18
CHGA-203ENST00000553866 LTBRP36941 435 aa13.91□□□□□ -0.18
CHGA-203ENST00000553866 MLH1P40692 756 aa13.91□□□□□ -0.18
CHGA-203ENST00000553866 UBA7P41226 1012 aa13.91□□□□□ -0.18
CHGA-203ENST00000553866 PLCB3Q01970 1234 aa13.91□□□□□ -0.18
CHGA-203ENST00000553866 DLX2Q07687 328 aaPredicted RBP13.91□□□□□ -0.18
CHGA-203ENST00000553866 PRPF4BQ13523 1007 aaKnown RBP13.91□□□□□ -0.18
CHGA-203ENST00000553866 DHX8Q14562 1220 aaKnown RBP13.91□□□□□ -0.18
CHGA-203ENST00000553866 COL19A1Q14993 1142 aa13.91□□□□□ -0.18
CHGA-203ENST00000553866 SLC39A14Q15043 492 aa13.91□□□□□ -0.18
CHGA-203ENST00000553866 FOXD4L6Q3SYB3 417 aaPredicted RBP13.91□□□□□ -0.18
CHGA-203ENST00000553866 TJAP1Q5JTD0 557 aa13.91□□□□□ -0.18
CHGA-203ENST00000553866 FOXD4L3Q6VB84 417 aaPredicted RBP13.91□□□□□ -0.18
CHGA-203ENST00000553866 RBM23Q86U06 439 aaKnown RBP13.91□□□□□ -0.18
CHGA-203ENST00000553866 GSTCDQ8NEC7 633 aa13.91□□□□□ -0.18
CHGA-203ENST00000553866 MRPS27Q92552 414 aaKnown RBP13.91□□□□□ -0.18
CHGA-203ENST00000553866 CCDC51Q96ER9 411 aa13.91□□□□□ -0.18
CHGA-203ENST00000553866 CDK5RAP3Q96JB5 506 aa13.91□□□□□ -0.18
CHGA-203ENST00000553866 GAD1Q99259 594 aa13.91□□□□□ -0.18
CHGA-203ENST00000553866 MRPL9Q9BYD2 267 aaKnown RBP13.91□□□□□ -0.18
CHGA-203ENST00000553866 CCSER1Q9C0I3 900 aa13.91□□□□□ -0.18
CHGA-203ENST00000553866 C2orf40Q9H1Z8 148 aa13.91□□□□□ -0.18
CHGA-203ENST00000553866 IGFLR1Q9H665 355 aa13.91□□□□□ -0.18
CHGA-203ENST00000553866 SPG21Q9NZD8 308 aa13.91□□□□□ -0.18
CHGA-203ENST00000553866 KLK14Q9P0G3 267 aa13.91□□□□□ -0.18
CHGA-203ENST00000553866 COG5Q9UP83 839 aa13.91□□□□□ -0.18
CHGA-203ENST00000553866 SRPRBQ9Y5M8 271 aaKnown RBP13.91□□□□□ -0.18
CHGA-203ENST00000553866 MYH11P35749 1972 aa13.91□□□□□ -0.18
CHGA-203ENST00000553866 A0A087X0B3 334 aa13.9□□□□□ -0.18
CHGA-203ENST00000553866 ARL5CA6NH57 179 aa13.9□□□□□ -0.18
CHGA-203ENST00000553866 H3BQ06 376 aaPredicted RBP13.9□□□□□ -0.18
CHGA-203ENST00000553866 PER2O15055 1255 aa13.9□□□□□ -0.18
CHGA-203ENST00000553866 SLC16A4O15374 487 aa13.9□□□□□ -0.18
CHGA-203ENST00000553866 GALTP07902 379 aa13.9□□□□□ -0.18
CHGA-203ENST00000553866 KCNA5P22460 613 aa13.9□□□□□ -0.18
CHGA-203ENST00000553866 NASPP49321 788 aaPredicted RBP13.9□□□□□ -0.18
CHGA-203ENST00000553866 SCNN1GP51170 649 aa13.9□□□□□ -0.18
CHGA-203ENST00000553866 RBM10P98175 930 aaKnown RBP13.9□□□□□ -0.18
CHGA-203ENST00000553866 NCBP1Q09161 790 aaKnown RBP13.9□□□□□ -0.18
CHGA-203ENST00000553866 PPP2R5AQ15172 486 aa13.9□□□□□ -0.18
CHGA-203ENST00000553866 MAPK6Q16659 721 aa13.9□□□□□ -0.18
CHGA-203ENST00000553866 CTC1Q2NKJ3 1217 aa13.9□□□□□ -0.18
CHGA-203ENST00000553866 CNNM3Q8NE01 707 aa13.9□□□□□ -0.18
CHGA-203ENST00000553866 GADD45GIP1Q8TAE8 222 aaPredicted RBP13.9□□□□□ -0.18
CHGA-203ENST00000553866 SYMPKQ92797 1274 aaKnown RBP13.9□□□□□ -0.18
CHGA-203ENST00000553866 PRIMPOLQ96LW4 560 aa13.9□□□□□ -0.18
CHGA-203ENST00000553866 NECAB3Q96P71 396 aaPredicted RBP13.9□□□□□ -0.18
CHGA-203ENST00000553866 VN1R3Q9BXE9 311 aa13.9□□□□□ -0.18
CHGA-203ENST00000553866 TLR9Q9NR96 1032 aa13.9□□□□□ -0.18
CHGA-203ENST00000553866 ARHGAP28Q9P2N2 729 aa13.9□□□□□ -0.18
CHGA-203ENST00000553866 C5orf42Q9H799 3197 aa13.89□□□□□ -0.19
CHGA-203ENST00000553866 HIDE1A8MVS5 230 aa13.89□□□□□ -0.19
CHGA-203ENST00000553866 F8W810 466 aa13.89□□□□□ -0.19
CHGA-203ENST00000553866 K7ERI5 159 aa13.89□□□□□ -0.19
CHGA-203ENST00000553866 INPPL1O15357 1258 aa13.89□□□□□ -0.19
CHGA-203ENST00000553866 HSP90AA1P07900 732 aaKnown RBP13.89□□□□□ -0.19
CHGA-203ENST00000553866 ZSCAN22P10073 491 aaPredicted RBP13.89□□□□□ -0.19
CHGA-203ENST00000553866 NRIP1P48552 1158 aa13.89□□□□□ -0.19
CHGA-203ENST00000553866 UBE3AQ05086 875 aa13.89□□□□□ -0.19
CHGA-203ENST00000553866 RNASELQ05823 741 aaKnown RBP13.89□□□□□ -0.19
CHGA-203ENST00000553866 CSPP1Q1MSJ5 1256 aa13.89□□□□□ -0.19
CHGA-203ENST00000553866 PLPP4Q5VZY2 271 aa13.89□□□□□ -0.19
CHGA-203ENST00000553866 EP400NLQ6ZTU2 488 aa13.89□□□□□ -0.19
CHGA-203ENST00000553866 GPBP1Q86WP2 473 aa13.89□□□□□ -0.19
CHGA-203ENST00000553866 LINC00301Q8NCQ3 95 aa13.89□□□□□ -0.19
CHGA-203ENST00000553866 URGCPQ8TCY9 931 aa13.89□□□□□ -0.19
CHGA-203ENST00000553866 RAD54LQ92698 747 aa13.89□□□□□ -0.19
CHGA-203ENST00000553866 PABPC5Q96DU9 382 aaKnown RBP13.89□□□□□ -0.19
CHGA-203ENST00000553866 CALML4Q96GE6 196 aa13.89□□□□□ -0.19
CHGA-203ENST00000553866 CHAMP1Q96JM3 812 aa13.89□□□□□ -0.19
CHGA-203ENST00000553866 DRC1Q96MC2 740 aa13.89□□□□□ -0.19
CHGA-203ENST00000553866 REEP2Q9BRK0 252 aa13.89□□□□□ -0.19
CHGA-203ENST00000553866 TRIM6Q9C030 488 aaPredicted RBP13.89□□□□□ -0.19
CHGA-203ENST00000553866 KMT5AQ9NQR1 393 aa13.89□□□□□ -0.19
CHGA-203ENST00000553866 CLDND1Q9NY35 253 aa13.89□□□□□ -0.19
CHGA-203ENST00000553866 SNTG2Q9NY99 539 aa13.89□□□□□ -0.19
CHGA-203ENST00000553866 CACNG4Q9UBN1 327 aa13.89□□□□□ -0.19
CHGA-203ENST00000553866 PARP2Q9UGN5 583 aa13.89□□□□□ -0.19
CHGA-203ENST00000553866 TDRD15B5MCY1 1934 aaKnown RBP13.89□□□□□ -0.19
CHGA-203ENST00000553866 N4BP3O15049 544 aa13.88□□□□□ -0.19
CHGA-203ENST00000553866 SLC26A4O43511 780 aa13.88□□□□□ -0.19
CHGA-203ENST00000553866 TBX10O75333 385 aa13.88□□□□□ -0.19
CHGA-203ENST00000553866 GLP2RO95838 553 aa13.88□□□□□ -0.19
CHGA-203ENST00000553866 F13A1P00488 732 aa13.88□□□□□ -0.19
CHGA-203ENST00000553866 PLS3P13797 630 aa13.88□□□□□ -0.19
CHGA-203ENST00000553866 ALDH7A1P49419 539 aaKnown RBP13.88□□□□□ -0.19
CHGA-203ENST00000553866 EFNA5P52803 228 aa13.88□□□□□ -0.19
CHGA-203ENST00000553866 DMP1Q13316 513 aaPredicted RBP13.88□□□□□ -0.19
CHGA-203ENST00000553866 ADAM15Q13444 863 aa13.88□□□□□ -0.19
CHGA-203ENST00000553866 GIT2Q14161 759 aa13.88□□□□□ -0.19
CHGA-203ENST00000553866 ATF7IP2Q5U623 682 aa13.88□□□□□ -0.19
CHGA-203ENST00000553866 COLGALT2Q8IYK4 626 aa13.88□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 38.7 ms