RNA–Protein interactions for RNA: ENST00000553474.5

SHMT2-205, Transcript of serine hydroxymethyltransferase 2, humanhuman

TSL 2 BASIC

Gene SHMT2, Length 1,765 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT2-205ENST00000553474 FOXN3O00409 490 aaPredicted RBP13.94□□□□□ -0.18
SHMT2-205ENST00000553474 RTN2O75298 545 aa13.94□□□□□ -0.18
SHMT2-205ENST00000553474 STAM2O75886 525 aa13.94□□□□□ -0.18
SHMT2-205ENST00000553474 GGPS1O95749 300 aa13.94□□□□□ -0.18
SHMT2-205ENST00000553474 GBP1P32455 592 aa13.94□□□□□ -0.18
SHMT2-205ENST00000553474 NF2P35240 595 aa13.94□□□□□ -0.18
SHMT2-205ENST00000553474 MFAP3P55082 362 aa13.94□□□□□ -0.18
SHMT2-205ENST00000553474 PTENP60484 403 aa13.94□□□□□ -0.18
SHMT2-205ENST00000553474 ERVK-9P63128 1117 aa13.94□□□□□ -0.18
SHMT2-205ENST00000553474 DMP1Q13316 513 aaPredicted RBP13.94□□□□□ -0.18
SHMT2-205ENST00000553474 DHX34Q14147 1143 aaKnown RBP13.94□□□□□ -0.18
SHMT2-205ENST00000553474 TTLL12Q14166 644 aaPredicted RBP13.94□□□□□ -0.18
SHMT2-205ENST00000553474 NLRX1Q86UT6 975 aa13.94□□□□□ -0.18
SHMT2-205ENST00000553474 UBL4BQ8N7F7 174 aa13.94□□□□□ -0.18
SHMT2-205ENST00000553474 TMC2Q8TDI7 906 aa13.94□□□□□ -0.18
SHMT2-205ENST00000553474 CDHR1Q96JP9 859 aa13.94□□□□□ -0.18
SHMT2-205ENST00000553474 RMDN3Q96TC7 470 aa13.94□□□□□ -0.18
SHMT2-205ENST00000553474 IKZF4Q9H2S9 585 aa13.94□□□□□ -0.18
SHMT2-205ENST00000553474 ARID2Q68CP9 1835 aa13.94□□□□□ -0.18
SHMT2-205ENST00000553474 DDX3YO15523 660 aaKnown RBP13.94□□□□□ -0.18
SHMT2-205ENST00000553474 VCAM1P19320 739 aa13.94□□□□□ -0.18
SHMT2-205ENST00000553474 IRAK1P51617 712 aa13.94□□□□□ -0.18
SHMT2-205ENST00000553474 GPC5P78333 572 aa13.94□□□□□ -0.18
SHMT2-205ENST00000553474 PPP3CAQ08209 521 aa13.94□□□□□ -0.18
SHMT2-205ENST00000553474 HLTFQ14527 1009 aaKnown RBP eCLIP13.94□□□□□ -0.18
SHMT2-205ENST00000553474 ARHGAP44Q17R89 818 aa13.94□□□□□ -0.18
SHMT2-205ENST00000553474 SUPT20HL1Q3ZLR7 823 aa13.94□□□□□ -0.18
SHMT2-205ENST00000553474 TTMPQ5BVD1 217 aa13.94□□□□□ -0.18
SHMT2-205ENST00000553474 DCAF15Q66K64 600 aa13.94□□□□□ -0.18
SHMT2-205ENST00000553474 KRT39Q6A163 491 aa13.94□□□□□ -0.18
SHMT2-205ENST00000553474 KDM7AQ6ZMT4 941 aa13.94□□□□□ -0.18
SHMT2-205ENST00000553474 RUFY4Q6ZNE9 571 aa13.94□□□□□ -0.18
SHMT2-205ENST00000553474 ENOSF1Q7L5Y1 443 aa13.94□□□□□ -0.18
SHMT2-205ENST00000553474 SRLQ86TD4 932 aa13.94□□□□□ -0.18
SHMT2-205ENST00000553474 FAM71AQ8IYT1 594 aa13.94□□□□□ -0.18
SHMT2-205ENST00000553474 CPXCR1Q8N123 301 aa13.94□□□□□ -0.18
SHMT2-205ENST00000553474 ARFGAP2Q8N6H7 521 aa13.94□□□□□ -0.18
SHMT2-205ENST00000553474 KCNN1Q92952 543 aa13.94□□□□□ -0.18
SHMT2-205ENST00000553474 RUNDC3BQ96NL0 473 aa13.94□□□□□ -0.18
SHMT2-205ENST00000553474 TRERF1Q96PN7 1200 aa13.94□□□□□ -0.18
SHMT2-205ENST00000553474 CBWD1Q9BRT8 395 aa13.94□□□□□ -0.18
SHMT2-205ENST00000553474 MOV10L1Q9BXT6 1211 aaKnown RBP13.94□□□□□ -0.18
SHMT2-205ENST00000553474 AS3MTQ9HBK9 375 aa13.94□□□□□ -0.18
SHMT2-205ENST00000553474 RAVER2Q9HCJ3 691 aaKnown RBP13.94□□□□□ -0.18
SHMT2-205ENST00000553474 OSGEPQ9NPF4 335 aa13.94□□□□□ -0.18
SHMT2-205ENST00000553474 FRMD4AQ9P2Q2 1039 aaPredicted RBP13.94□□□□□ -0.18
SHMT2-205ENST00000553474 PCDHA10Q9Y5I2 948 aa13.94□□□□□ -0.18
SHMT2-205ENST00000553474 ESYT3A0FGR9 886 aa13.93□□□□□ -0.18
SHMT2-205ENST00000553474 FAM187AA6NFU0 413 aa13.93□□□□□ -0.18
SHMT2-205ENST00000553474 ZSCAN5CA6NGD5 496 aaPredicted RBP13.93□□□□□ -0.18
SHMT2-205ENST00000553474 ZNF233A6NK53 670 aa13.93□□□□□ -0.18
SHMT2-205ENST00000553474 EIF3HO15372 352 aaKnown RBP eCLIP13.93□□□□□ -0.18
SHMT2-205ENST00000553474 ZC3H11AO75152 810 aaKnown RBP eCLIP13.93□□□□□ -0.18
SHMT2-205ENST00000553474 ERLIN2O94905 339 aa13.93□□□□□ -0.18
SHMT2-205ENST00000553474 FAM153BP0C7A2 387 aa13.93□□□□□ -0.18
SHMT2-205ENST00000553474 ECHS1P30084 290 aa13.93□□□□□ -0.18
SHMT2-205ENST00000553474 CCND2P30279 289 aa13.93□□□□□ -0.18
SHMT2-205ENST00000553474 GPC3P51654 580 aa13.93□□□□□ -0.18
SHMT2-205ENST00000553474 DRG2P55039 364 aaKnown RBP13.93□□□□□ -0.18
SHMT2-205ENST00000553474 PEX3P56589 373 aa13.93□□□□□ -0.18
SHMT2-205ENST00000553474 RNASE9P60153 205 aaKnown RBP13.93□□□□□ -0.18
SHMT2-205ENST00000553474 MRPS25P82663 173 aaKnown RBP13.93□□□□□ -0.18
SHMT2-205ENST00000553474 POU5F1Q01860 360 aaKnown RBP13.93□□□□□ -0.18
SHMT2-205ENST00000553474 BIRC3Q13489 604 aa13.93□□□□□ -0.18
SHMT2-205ENST00000553474 FAM153CQ494X1 144 aa13.93□□□□□ -0.18
SHMT2-205ENST00000553474 XKR9Q5GH70 373 aa13.93□□□□□ -0.18
SHMT2-205ENST00000553474 C1orf220Q5T0J3 134 aa13.93□□□□□ -0.18
SHMT2-205ENST00000553474 ARHGEF16Q5VV41 709 aa13.93□□□□□ -0.18
SHMT2-205ENST00000553474 RDH13Q8NBN7 331 aa13.93□□□□□ -0.18
SHMT2-205ENST00000553474 SMC1BQ8NDV3 1235 aa13.93□□□□□ -0.18
SHMT2-205ENST00000553474 ATP6V0A1Q93050 837 aa13.93□□□□□ -0.18
SHMT2-205ENST00000553474 ATP6V1G3Q96LB4 118 aa13.93□□□□□ -0.18
SHMT2-205ENST00000553474 FBXL18Q96ME1 805 aa13.93□□□□□ -0.18
SHMT2-205ENST00000553474 TAAR1Q96RJ0 339 aa13.93□□□□□ -0.18
SHMT2-205ENST00000553474 HINFPQ9BQA5 517 aa13.93□□□□□ -0.18
SHMT2-205ENST00000553474 TMEM117Q9H0C3 514 aa13.93□□□□□ -0.18
SHMT2-205ENST00000553474 THAP2Q9H0W7 228 aa13.93□□□□□ -0.18
SHMT2-205ENST00000553474 GOLPH3Q9H4A6 298 aa13.93□□□□□ -0.18
SHMT2-205ENST00000553474 TMEM8AQ9HCN3 771 aa13.93□□□□□ -0.18
SHMT2-205ENST00000553474 FAM153AQ9UHL3 310 aa13.93□□□□□ -0.18
SHMT2-205ENST00000553474 TBX20Q9UMR3 447 aa13.93□□□□□ -0.18
SHMT2-205ENST00000553474 VWA5AO00534 786 aa13.92□□□□□ -0.18
SHMT2-205ENST00000553474 KIAA0391O15091 583 aaKnown RBP13.92□□□□□ -0.18
SHMT2-205ENST00000553474 NFASCO94856 1347 aa13.92□□□□□ -0.18
SHMT2-205ENST00000553474 FGGP02679 453 aa13.92□□□□□ -0.18
SHMT2-205ENST00000553474 EIF2AK2P19525 551 aaKnown RBP13.92□□□□□ -0.18
SHMT2-205ENST00000553474 ABCB4P21439 1286 aa13.92□□□□□ -0.18
SHMT2-205ENST00000553474 DLG4P78352 724 aa13.92□□□□□ -0.18
SHMT2-205ENST00000553474 SNRNP35Q16560 246 aaKnown RBP13.92□□□□□ -0.18
SHMT2-205ENST00000553474 DNAJC21Q5F1R6 531 aaKnown RBP13.92□□□□□ -0.18
SHMT2-205ENST00000553474 KIAA1217Q5T5P2 1943 aa13.92□□□□□ -0.18
SHMT2-205ENST00000553474 VSIG10LQ86VR7 867 aa13.92□□□□□ -0.18
SHMT2-205ENST00000553474 TMEM161BQ8NDZ6 487 aa13.92□□□□□ -0.18
SHMT2-205ENST00000553474 MCPH1Q8NEM0 835 aa13.92□□□□□ -0.18
SHMT2-205ENST00000553474 PIK3R5Q8WYR1 880 aa13.92□□□□□ -0.18
SHMT2-205ENST00000553474 SHC3Q92529 594 aa13.92□□□□□ -0.18
SHMT2-205ENST00000553474 ZFP91Q96JP5 570 aaPredicted RBP13.92□□□□□ -0.18
SHMT2-205ENST00000553474 RNPC3Q96LT9 517 aaKnown RBP13.92□□□□□ -0.18
SHMT2-205ENST00000553474 PAPPA2Q9BXP8 1791 aa13.92□□□□□ -0.18
SHMT2-205ENST00000553474 AP1M1Q9BXS5 423 aa13.92□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 26.9 ms