RNA–Protein interactions for RNA: ENST00000553290.1

ACTN1-207, Transcript of actinin alpha 1, humanhuman

TSL 5

Gene ACTN1, Length 619 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACTN1-207ENST00000553290 HIDE1A8MVS5 230 aa14.33□□□□□ -0.12
ACTN1-207ENST00000553290 INPPL1O15357 1258 aa14.33□□□□□ -0.12
ACTN1-207ENST00000553290 ALDH2P05091 517 aa14.33□□□□□ -0.12
ACTN1-207ENST00000553290 NAMPTP43490 491 aa14.33□□□□□ -0.12
ACTN1-207ENST00000553290 SLC11A1P49279 550 aa14.33□□□□□ -0.12
ACTN1-207ENST00000553290 ATP2C1P98194 919 aaPredicted RBP14.33□□□□□ -0.12
ACTN1-207ENST00000553290 ZP2Q05996 745 aa14.33□□□□□ -0.12
ACTN1-207ENST00000553290 GIT2Q14161 759 aa14.33□□□□□ -0.12
ACTN1-207ENST00000553290 ZNF280BQ86YH2 543 aa14.33□□□□□ -0.12
ACTN1-207ENST00000553290 VPS52Q8N1B4 723 aa14.33□□□□□ -0.12
ACTN1-207ENST00000553290 KIFAP3Q92845 792 aa14.33□□□□□ -0.12
ACTN1-207ENST00000553290 IFT74Q96LB3 600 aa14.33□□□□□ -0.12
ACTN1-207ENST00000553290 POP1Q99575 1024 aaKnown RBP14.33□□□□□ -0.12
ACTN1-207ENST00000553290 RNF39Q9H2S5 420 aa14.33□□□□□ -0.12
ACTN1-207ENST00000553290 FZD8Q9H461 694 aa14.33□□□□□ -0.12
ACTN1-207ENST00000553290 DNAJB4Q9UDY4 337 aa14.33□□□□□ -0.12
ACTN1-207ENST00000553290 GIT1Q9Y2X7 761 aa14.33□□□□□ -0.12
ACTN1-207ENST00000553290 C2orf71A6NGG8 1288 aa14.32□□□□□ -0.12
ACTN1-207ENST00000553290 ARL5CA6NH57 179 aa14.32□□□□□ -0.12
ACTN1-207ENST00000553290 C19orf67A6NJJ6 358 aa14.32□□□□□ -0.12
ACTN1-207ENST00000553290 B4GALT5O43286 388 aa14.32□□□□□ -0.12
ACTN1-207ENST00000553290 DDHD2O94830 711 aa14.32□□□□□ -0.12
ACTN1-207ENST00000553290 CXCL14O95715 111 aa14.32□□□□□ -0.12
ACTN1-207ENST00000553290 POMCP01189 267 aa14.32□□□□□ -0.12
ACTN1-207ENST00000553290 AFF1P51825 1210 aaKnown RBP14.32□□□□□ -0.12
ACTN1-207ENST00000553290 EFNA5P52803 228 aa14.32□□□□□ -0.12
ACTN1-207ENST00000553290 KCNC3Q14003 757 aa14.32□□□□□ -0.12
ACTN1-207ENST00000553290 IL17AQ16552 155 aa14.32□□□□□ -0.12
ACTN1-207ENST00000553290 MAPK6Q16659 721 aa14.32□□□□□ -0.12
ACTN1-207ENST00000553290 ARL6IP4Q66PJ3 421 aaKnown RBP14.32□□□□□ -0.12
ACTN1-207ENST00000553290 TMEM173Q86WV6 379 aaPredicted RBP14.32□□□□□ -0.12
ACTN1-207ENST00000553290 KCTD17Q8N5Z5 321 aa14.32□□□□□ -0.12
ACTN1-207ENST00000553290 VN1R2Q8NFZ6 395 aa14.32□□□□□ -0.12
ACTN1-207ENST00000553290 DEPTORQ8TB45 409 aa14.32□□□□□ -0.12
ACTN1-207ENST00000553290 BSNDQ8WZ55 320 aa14.32□□□□□ -0.12
ACTN1-207ENST00000553290 GAD1Q99259 594 aa14.32□□□□□ -0.12
ACTN1-207ENST00000553290 ZBP1Q9H171 429 aa14.32□□□□□ -0.12
ACTN1-207ENST00000553290 FAN1Q9Y2M0 1017 aa14.32□□□□□ -0.12
ACTN1-207ENST00000553290 HES2Q9Y543 173 aa14.32□□□□□ -0.12
ACTN1-207ENST00000553290 IRAK3Q9Y616 596 aa14.32□□□□□ -0.12
ACTN1-207ENST00000553290 ZMYM2Q9UBW7 1377 aa14.32□□□□□ -0.12
ACTN1-207ENST00000553290 PP2D1A8MPX8 630 aa14.31□□□□□ -0.12
ACTN1-207ENST00000553290 N4BP3O15049 544 aa14.31□□□□□ -0.12
ACTN1-207ENST00000553290 B4GALT3O60512 393 aa14.31□□□□□ -0.12
ACTN1-207ENST00000553290 NPTXRO95502 500 aa14.31□□□□□ -0.12
ACTN1-207ENST00000553290 PRKCBP05771 671 aa14.31□□□□□ -0.12
ACTN1-207ENST00000553290 CTSAP10619 480 aa14.31□□□□□ -0.12
ACTN1-207ENST00000553290 HOXB8P17481 243 aaPredicted RBP14.31□□□□□ -0.12
ACTN1-207ENST00000553290 CDC25AP30304 524 aa14.31□□□□□ -0.12
ACTN1-207ENST00000553290 CA8P35219 290 aa14.31□□□□□ -0.12
ACTN1-207ENST00000553290 MLH1P40692 756 aa14.31□□□□□ -0.12
ACTN1-207ENST00000553290 PRPF4BQ13523 1007 aaKnown RBP14.31□□□□□ -0.12
ACTN1-207ENST00000553290 CUL4AQ13619 759 aa14.31□□□□□ -0.12
ACTN1-207ENST00000553290 TMEM132AQ24JP5 1023 aa14.31□□□□□ -0.12
ACTN1-207ENST00000553290 BRAPQ7Z569 592 aa14.31□□□□□ -0.12
ACTN1-207ENST00000553290 CDR2LQ86X02 465 aaPredicted RBP14.31□□□□□ -0.12
ACTN1-207ENST00000553290 TMEM87AQ8NBN3 555 aa14.31□□□□□ -0.12
ACTN1-207ENST00000553290 BCL7CQ8WUZ0 217 aaPredicted RBP14.31□□□□□ -0.12
ACTN1-207ENST00000553290 CASP10Q92851 521 aa14.31□□□□□ -0.12
ACTN1-207ENST00000553290 MMTAG2Q9BU76 263 aaKnown RBP14.31□□□□□ -0.12
ACTN1-207ENST00000553290 APOL6Q9BWW8 343 aa14.31□□□□□ -0.12
ACTN1-207ENST00000553290 BACH2Q9BYV9 841 aa14.31□□□□□ -0.12
ACTN1-207ENST00000553290 NT5C3AQ9H0P0 336 aa14.31□□□□□ -0.12
ACTN1-207ENST00000553290 NXF3Q9H4D5 531 aaKnown RBP14.31□□□□□ -0.12
ACTN1-207ENST00000553290 EPHX3Q9H6B9 360 aa14.31□□□□□ -0.12
ACTN1-207ENST00000553290 TDRD15B5MCY1 1934 aaKnown RBP14.31□□□□□ -0.12
ACTN1-207ENST00000553290 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP14.3□□□□□ -0.12
ACTN1-207ENST00000553290 E9PMD0 336 aa14.3□□□□□ -0.12
ACTN1-207ENST00000553290 PI4K2BG5E9Z4 385 aa14.3□□□□□ -0.12
ACTN1-207ENST00000553290 ACKR2O00590 384 aa14.3□□□□□ -0.12
ACTN1-207ENST00000553290 NRP1O14786 923 aa14.3□□□□□ -0.12
ACTN1-207ENST00000553290 NR1I2O75469 434 aa14.3□□□□□ -0.12
ACTN1-207ENST00000553290 SCNN1GP51170 649 aa14.3□□□□□ -0.12
ACTN1-207ENST00000553290 RBM10P98175 930 aaKnown RBP14.3□□□□□ -0.12
ACTN1-207ENST00000553290 ANKRD54Q6NXT1 300 aa14.3□□□□□ -0.12
ACTN1-207ENST00000553290 LLGL2Q6P1M3 1020 aa14.3□□□□□ -0.12
ACTN1-207ENST00000553290 COLGALT2Q8IYK4 626 aa14.3□□□□□ -0.12
ACTN1-207ENST00000553290 KHSRPQ92945 711 aaKnown RBP eCLIP14.3□□□□□ -0.12
ACTN1-207ENST00000553290 ZFP42Q96MM3 310 aa14.3□□□□□ -0.12
ACTN1-207ENST00000553290 ADPGKQ9BRR6 497 aa14.3□□□□□ -0.12
ACTN1-207ENST00000553290 CCDC113Q9H0I3 377 aa14.3□□□□□ -0.12
ACTN1-207ENST00000553290 PARP2Q9UGN5 583 aa14.3□□□□□ -0.12
ACTN1-207ENST00000553290 USP15Q9Y4E8 981 aaPredicted RBP14.3□□□□□ -0.12
ACTN1-207ENST00000553290 VWA3AA6NCI4 1184 aa14.29□□□□□ -0.12
ACTN1-207ENST00000553290 CLASP2O75122 1294 aaKnown RBP14.29□□□□□ -0.12
ACTN1-207ENST00000553290 BMP15O95972 392 aa14.29□□□□□ -0.12
ACTN1-207ENST00000553290 ALADP13716 330 aa14.29□□□□□ -0.12
ACTN1-207ENST00000553290 PDCP20941 246 aa14.29□□□□□ -0.12
ACTN1-207ENST00000553290 AKAP5P24588 427 aa14.29□□□□□ -0.12
ACTN1-207ENST00000553290 OR1G1P47890 313 aa14.29□□□□□ -0.12
ACTN1-207ENST00000553290 DSC1Q08554 894 aa14.29□□□□□ -0.12
ACTN1-207ENST00000553290 TPRNQ4KMQ1 711 aa14.29□□□□□ -0.12
ACTN1-207ENST00000553290 HYIQ5T013 277 aa14.29□□□□□ -0.12
ACTN1-207ENST00000553290 RINT1Q6NUQ1 792 aa14.29□□□□□ -0.12
ACTN1-207ENST00000553290 SUSD6Q92537 303 aa14.29□□□□□ -0.12
ACTN1-207ENST00000553290 DRC1Q96MC2 740 aa14.29□□□□□ -0.12
ACTN1-207ENST00000553290 TIPINQ9BVW5 301 aa14.29□□□□□ -0.12
ACTN1-207ENST00000553290 VN1R3Q9BXE9 311 aa14.29□□□□□ -0.12
ACTN1-207ENST00000553290 PDZD7Q9H5P4 517 aa14.29□□□□□ -0.12
ACTN1-207ENST00000553290 POLD4Q9HCU8 107 aa14.29□□□□□ -0.12
Retrieved 100 of 20,778 RNA–protein pairs in 39.4 ms