RNA–Protein interactions for RNA: ENST00000553237.5

CDK4-215, Transcript of cyclin dependent kinase 4, humanhuman

TSL 2

Gene CDK4, Length 952 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK4-215ENST00000553237 BMS1Q14692 1282 aaKnown RBP17.6■□□□□ 0.41
CDK4-215ENST00000553237 TMEM31Q5JXX7 168 aa17.6■□□□□ 0.41
CDK4-215ENST00000553237 ANKRD54Q6NXT1 300 aa17.6■□□□□ 0.41
CDK4-215ENST00000553237 DDX53Q86TM3 631 aaKnown RBP17.6■□□□□ 0.41
CDK4-215ENST00000553237 BSNDQ8WZ55 320 aa17.6■□□□□ 0.41
CDK4-215ENST00000553237 POP1Q99575 1024 aaKnown RBP17.6■□□□□ 0.41
CDK4-215ENST00000553237 LRFN3Q9BTN0 628 aa17.6■□□□□ 0.41
CDK4-215ENST00000553237 ZBP1Q9H171 429 aa17.6■□□□□ 0.41
CDK4-215ENST00000553237 BHMT2Q9H2M3 363 aa17.6■□□□□ 0.41
CDK4-215ENST00000553237 UBN1Q9NPG3 1134 aa17.6■□□□□ 0.41
CDK4-215ENST00000553237 FAN1Q9Y2M0 1017 aa17.6■□□□□ 0.41
CDK4-215ENST00000553237 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP17.59■□□□□ 0.41
CDK4-215ENST00000553237 H3BQV1 296 aa17.59■□□□□ 0.41
CDK4-215ENST00000553237 CLASP2O75122 1294 aaKnown RBP17.59■□□□□ 0.41
CDK4-215ENST00000553237 SRGAP2BP0DMP2 458 aa17.59■□□□□ 0.41
CDK4-215ENST00000553237 LIG1P18858 919 aa17.59■□□□□ 0.41
CDK4-215ENST00000553237 AKAP5P24588 427 aa17.59■□□□□ 0.41
CDK4-215ENST00000553237 CDC25AP30304 524 aa17.59■□□□□ 0.41
CDK4-215ENST00000553237 MLH1P40692 756 aa17.59■□□□□ 0.41
CDK4-215ENST00000553237 PDIA5Q14554 519 aa17.59■□□□□ 0.41
CDK4-215ENST00000553237 IL17AQ16552 155 aa17.59■□□□□ 0.41
CDK4-215ENST00000553237 TMEM184AQ6ZMB5 413 aa17.59■□□□□ 0.41
CDK4-215ENST00000553237 ZBTB8OSQ8IWT0 167 aa17.59■□□□□ 0.41
CDK4-215ENST00000553237 IGSF22Q8N9C0 903 aa17.59■□□□□ 0.41
CDK4-215ENST00000553237 TMEM87AQ8NBN3 555 aa17.59■□□□□ 0.41
CDK4-215ENST00000553237 SNX29Q8TEQ0 813 aa17.59■□□□□ 0.41
CDK4-215ENST00000553237 ZFP42Q96MM3 310 aa17.59■□□□□ 0.41
CDK4-215ENST00000553237 VN1R3Q9BXE9 311 aa17.59■□□□□ 0.41
CDK4-215ENST00000553237 NXF3Q9H4D5 531 aaKnown RBP17.59■□□□□ 0.41
CDK4-215ENST00000553237 C11orf16Q9NQ32 467 aa17.59■□□□□ 0.41
CDK4-215ENST00000553237 EIF4ENIF1Q9NRA8 985 aaKnown RBP17.59■□□□□ 0.41
CDK4-215ENST00000553237 DDX19AQ9NUU7 478 aaKnown RBP17.59■□□□□ 0.41
CDK4-215ENST00000553237 MIOSQ9NXC5 875 aa17.59■□□□□ 0.41
CDK4-215ENST00000553237 USP20Q9Y2K6 914 aa17.59■□□□□ 0.41
CDK4-215ENST00000553237 PRG3Q9Y2Y8 225 aaPredicted RBP17.59■□□□□ 0.41
CDK4-215ENST00000553237 HCFC2Q9Y5Z7 792 aa17.59■□□□□ 0.41
CDK4-215ENST00000553237 A0A1B0GUA9 196 aa17.58■□□□□ 0.4
CDK4-215ENST00000553237 CARNS1A5YM72 827 aa17.58■□□□□ 0.4
CDK4-215ENST00000553237 ARL5CA6NH57 179 aa17.58■□□□□ 0.4
CDK4-215ENST00000553237 TTLL13PA6NNM8 815 aa17.58■□□□□ 0.4
CDK4-215ENST00000553237 NRP1O14786 923 aa17.58■□□□□ 0.4
CDK4-215ENST00000553237 SSBP05455 408 aaKnown RBP eCLIP17.58■□□□□ 0.4
CDK4-215ENST00000553237 CTSAP10619 480 aa17.58■□□□□ 0.4
CDK4-215ENST00000553237 ALADP13716 330 aa17.58■□□□□ 0.4
CDK4-215ENST00000553237 MUTP22033 750 aa17.58■□□□□ 0.4
CDK4-215ENST00000553237 MCM2P49736 904 aa17.58■□□□□ 0.4
CDK4-215ENST00000553237 SCNN1GP51170 649 aa17.58■□□□□ 0.4
CDK4-215ENST00000553237 CDCA2Q69YH5 1023 aaPredicted RBP17.58■□□□□ 0.4
CDK4-215ENST00000553237 SLC27A1Q6PCB7 646 aa17.58■□□□□ 0.4
CDK4-215ENST00000553237 SYCE2Q6PIF2 218 aa17.58■□□□□ 0.4
CDK4-215ENST00000553237 DTHD1Q6ZMT9 781 aa17.58■□□□□ 0.4
CDK4-215ENST00000553237 TMEM175Q9BSA9 504 aa17.58■□□□□ 0.4
CDK4-215ENST00000553237 RAB34Q9BZG1 259 aa17.58■□□□□ 0.4
CDK4-215ENST00000553237 S1PR5Q9H228 398 aa17.58■□□□□ 0.4
CDK4-215ENST00000553237 PRMT7Q9NVM4 692 aaPredicted RBP17.58■□□□□ 0.4
CDK4-215ENST00000553237 KLK14Q9P0G3 267 aa17.58■□□□□ 0.4
CDK4-215ENST00000553237 PARP2Q9UGN5 583 aa17.58■□□□□ 0.4
CDK4-215ENST00000553237 SMC3Q9UQE7 1217 aa17.58■□□□□ 0.4
CDK4-215ENST00000553237 E9PMD0 336 aa17.57■□□□□ 0.4
CDK4-215ENST00000553237 DCXO43602 365 aa17.57■□□□□ 0.4
CDK4-215ENST00000553237 GPR37L1O60883 481 aa17.57■□□□□ 0.4
CDK4-215ENST00000553237 OR1G1P47890 313 aa17.57■□□□□ 0.4
CDK4-215ENST00000553237 TMEM132AQ24JP5 1023 aa17.57■□□□□ 0.4
CDK4-215ENST00000553237 KRT79Q5XKE5 535 aa17.57■□□□□ 0.4
CDK4-215ENST00000553237 PPP4R3CPQ6ZMV5 832 aa17.57■□□□□ 0.4
CDK4-215ENST00000553237 COLGALT2Q8IYK4 626 aa17.57■□□□□ 0.4
CDK4-215ENST00000553237 HACE1Q8IYU2 909 aa17.57■□□□□ 0.4
CDK4-215ENST00000553237 DEPTORQ8TB45 409 aa17.57■□□□□ 0.4
CDK4-215ENST00000553237 CASP10Q92851 521 aa17.57■□□□□ 0.4
CDK4-215ENST00000553237 RPGRIP1Q96KN7 1286 aa17.57■□□□□ 0.4
CDK4-215ENST00000553237 KIFC3Q9BVG8 833 aa17.57■□□□□ 0.4
CDK4-215ENST00000553237 C2orf40Q9H1Z8 148 aa17.57■□□□□ 0.4
CDK4-215ENST00000553237 FZD8Q9H461 694 aa17.57■□□□□ 0.4
CDK4-215ENST00000553237 CDH22Q9UJ99 828 aa17.57■□□□□ 0.4
CDK4-215ENST00000553237 GIT1Q9Y2X7 761 aa17.57■□□□□ 0.4
CDK4-215ENST00000553237 STK24Q9Y6E0 443 aa17.57■□□□□ 0.4
CDK4-215ENST00000553237 LAD1O00515 517 aa17.56■□□□□ 0.4
CDK4-215ENST00000553237 NAMPTP43490 491 aa17.56■□□□□ 0.4
CDK4-215ENST00000553237 ZRSR1Q15695 479 aaKnown RBP17.56■□□□□ 0.4
CDK4-215ENST00000553237 MAPK6Q16659 721 aa17.56■□□□□ 0.4
CDK4-215ENST00000553237 RILPL1Q5EBL4 403 aa17.56■□□□□ 0.4
CDK4-215ENST00000553237 RNF135Q8IUD6 432 aa17.56■□□□□ 0.4
CDK4-215ENST00000553237 SUSD6Q92537 303 aa17.56■□□□□ 0.4
CDK4-215ENST00000553237 IFT74Q96LB3 600 aa17.56■□□□□ 0.4
CDK4-215ENST00000553237 PHF7Q9BWX1 381 aaPredicted RBP17.56■□□□□ 0.4
CDK4-215ENST00000553237 MUTYHQ9UIF7 546 aa17.56■□□□□ 0.4
CDK4-215ENST00000553237 DNM3Q9UQ16 869 aa17.56■□□□□ 0.4
CDK4-215ENST00000553237 C5orf42Q9H799 3197 aa17.55■□□□□ 0.4
CDK4-215ENST00000553237 F8W810 466 aa17.55■□□□□ 0.4
CDK4-215ENST00000553237 INPPL1O15357 1258 aa17.55■□□□□ 0.4
CDK4-215ENST00000553237 PRKCBP05771 671 aa17.55■□□□□ 0.4
CDK4-215ENST00000553237 HOXB8P17481 243 aaPredicted RBP17.55■□□□□ 0.4
CDK4-215ENST00000553237 PRPHP41219 470 aa17.55■□□□□ 0.4
CDK4-215ENST00000553237 PRPF4BQ13523 1007 aaKnown RBP17.55■□□□□ 0.4
CDK4-215ENST00000553237 GIT2Q14161 759 aa17.55■□□□□ 0.4
CDK4-215ENST00000553237 PPP2R5AQ15172 486 aa17.55■□□□□ 0.4
CDK4-215ENST00000553237 PTPN14Q15678 1187 aa17.55■□□□□ 0.4
CDK4-215ENST00000553237 FAM187BQ17R55 369 aa17.55■□□□□ 0.4
CDK4-215ENST00000553237 LARP1BQ659C4 914 aaKnown RBP17.55■□□□□ 0.4
CDK4-215ENST00000553237 TAS1R1Q7RTX1 841 aa17.55■□□□□ 0.4
Retrieved 100 of 20,778 RNA–protein pairs in 16 ms