RNA–Protein interactions for RNA: ENST00000552374.6

TMEM116-215, Transcript of transmembrane protein 116, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene TMEM116, Length 1,408 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM116-215ENST00000552374 SLC11A1P49279 550 aa12.06□□□□□ -0.48
TMEM116-215ENST00000552374 RBM10P98175 930 aaKnown RBP12.06□□□□□ -0.48
TMEM116-215ENST00000552374 PRPF4BQ13523 1007 aaKnown RBP12.06□□□□□ -0.48
TMEM116-215ENST00000552374 PPP2R5AQ15172 486 aa12.06□□□□□ -0.48
TMEM116-215ENST00000552374 ARL6IP4Q66PJ3 421 aaKnown RBP12.06□□□□□ -0.48
TMEM116-215ENST00000552374 KCNK18Q7Z418 384 aa12.06□□□□□ -0.48
TMEM116-215ENST00000552374 BRAPQ7Z569 592 aa12.06□□□□□ -0.48
TMEM116-215ENST00000552374 TMEM173Q86WV6 379 aaPredicted RBP12.06□□□□□ -0.48
TMEM116-215ENST00000552374 VPS52Q8N1B4 723 aa12.06□□□□□ -0.48
TMEM116-215ENST00000552374 MRPL43Q8N983 215 aaKnown RBP12.06□□□□□ -0.48
TMEM116-215ENST00000552374 RSPH1Q8WYR4 309 aa12.06□□□□□ -0.48
TMEM116-215ENST00000552374 CDK5RAP3Q96JB5 506 aa12.06□□□□□ -0.48
TMEM116-215ENST00000552374 KIFC3Q9BVG8 833 aa12.06□□□□□ -0.48
TMEM116-215ENST00000552374 FZD8Q9H461 694 aa12.06□□□□□ -0.48
TMEM116-215ENST00000552374 NXF3Q9H4D5 531 aaKnown RBP12.06□□□□□ -0.48
TMEM116-215ENST00000552374 KLK14Q9P0G3 267 aa12.06□□□□□ -0.48
TMEM116-215ENST00000552374 BARX2Q9UMQ3 279 aaPredicted RBP12.06□□□□□ -0.48
TMEM116-215ENST00000552374 FAM50BQ9Y247 325 aa12.06□□□□□ -0.48
TMEM116-215ENST00000552374 TTLL13PA6NNM8 815 aa12.05□□□□□ -0.48
TMEM116-215ENST00000552374 PRKCBP05771 671 aa12.05□□□□□ -0.48
TMEM116-215ENST00000552374 SSTR3P32745 418 aaPredicted RBP12.05□□□□□ -0.48
TMEM116-215ENST00000552374 MLH1P40692 756 aa12.05□□□□□ -0.48
TMEM116-215ENST00000552374 PEX3P56589 373 aa12.05□□□□□ -0.48
TMEM116-215ENST00000552374 RAD51AP2Q09MP3 1159 aa12.05□□□□□ -0.48
TMEM116-215ENST00000552374 SF3A1Q15459 793 aaKnown RBP12.05□□□□□ -0.48
TMEM116-215ENST00000552374 CDCA2Q69YH5 1023 aaPredicted RBP12.05□□□□□ -0.48
TMEM116-215ENST00000552374 RINT1Q6NUQ1 792 aa12.05□□□□□ -0.48
TMEM116-215ENST00000552374 LLGL2Q6P1M3 1020 aa12.05□□□□□ -0.48
TMEM116-215ENST00000552374 SLC27A1Q6PCB7 646 aa12.05□□□□□ -0.48
TMEM116-215ENST00000552374 FAM178BQ8IXR5 827 aa12.05□□□□□ -0.48
TMEM116-215ENST00000552374 AUTS2Q8WXX7 1259 aa12.05□□□□□ -0.48
TMEM116-215ENST00000552374 IGSF21Q96ID5 467 aa12.05□□□□□ -0.48
TMEM116-215ENST00000552374 PRIMPOLQ96LW4 560 aa12.05□□□□□ -0.48
TMEM116-215ENST00000552374 ZFP42Q96MM3 310 aa12.05□□□□□ -0.48
TMEM116-215ENST00000552374 RUSC1Q9BVN2 902 aa12.05□□□□□ -0.48
TMEM116-215ENST00000552374 MIOSQ9NXC5 875 aa12.05□□□□□ -0.48
TMEM116-215ENST00000552374 CLEC1BQ9P126 229 aa12.05□□□□□ -0.48
TMEM116-215ENST00000552374 CD207Q9UJ71 328 aa12.05□□□□□ -0.48
TMEM116-215ENST00000552374 TCF20Q9UGU0 1960 aaKnown RBP12.04□□□□□ -0.48
TMEM116-215ENST00000552374 CARNS1A5YM72 827 aa12.04□□□□□ -0.48
TMEM116-215ENST00000552374 K7ELQ4 463 aaPredicted RBP12.04□□□□□ -0.48
TMEM116-215ENST00000552374 K7ERI5 159 aa12.04□□□□□ -0.48
TMEM116-215ENST00000552374 ACKR2O00590 384 aa12.04□□□□□ -0.48
TMEM116-215ENST00000552374 NRP1O14786 923 aa12.04□□□□□ -0.48
TMEM116-215ENST00000552374 B4GALT3O60512 393 aa12.04□□□□□ -0.48
TMEM116-215ENST00000552374 HIP1RO75146 1068 aa12.04□□□□□ -0.48
TMEM116-215ENST00000552374 SYT1P21579 422 aa12.04□□□□□ -0.48
TMEM116-215ENST00000552374 UBA7P41226 1012 aa12.04□□□□□ -0.48
TMEM116-215ENST00000552374 OR1G1P47890 313 aa12.04□□□□□ -0.48
TMEM116-215ENST00000552374 SCNN1GP51170 649 aa12.04□□□□□ -0.48
TMEM116-215ENST00000552374 EFNA5P52803 228 aa12.04□□□□□ -0.48
TMEM116-215ENST00000552374 DHX8Q14562 1220 aaKnown RBP12.04□□□□□ -0.48
TMEM116-215ENST00000552374 SMC1AQ14683 1233 aaKnown RBP12.04□□□□□ -0.48
TMEM116-215ENST00000552374 DUSP6Q16828 381 aa12.04□□□□□ -0.48
TMEM116-215ENST00000552374 FAM187BQ17R55 369 aa12.04□□□□□ -0.48
TMEM116-215ENST00000552374 PPP4R3CPQ6ZMV5 832 aa12.04□□□□□ -0.48
TMEM116-215ENST00000552374 C1orf186Q6ZWK4 172 aa12.04□□□□□ -0.48
TMEM116-215ENST00000552374 DDX53Q86TM3 631 aaKnown RBP12.04□□□□□ -0.48
TMEM116-215ENST00000552374 CABP7Q86V35 215 aa12.04□□□□□ -0.48
TMEM116-215ENST00000552374 BCL7CQ8WUZ0 217 aaPredicted RBP12.04□□□□□ -0.48
TMEM116-215ENST00000552374 PNMA5Q96PV4 448 aa12.04□□□□□ -0.48
TMEM116-215ENST00000552374 CDCA3Q99618 268 aaPredicted RBP12.04□□□□□ -0.48
TMEM116-215ENST00000552374 NT5C3AQ9H0P0 336 aa12.04□□□□□ -0.48
TMEM116-215ENST00000552374 CD320Q9NPF0 282 aa12.04□□□□□ -0.48
TMEM116-215ENST00000552374 GIT1Q9Y2X7 761 aa12.04□□□□□ -0.48
TMEM116-215ENST00000552374 NCOR1O75376 2440 aa12.04□□□□□ -0.48
TMEM116-215ENST00000552374 C2orf71A6NGG8 1288 aa12.03□□□□□ -0.48
TMEM116-215ENST00000552374 N4BP3O15049 544 aa12.03□□□□□ -0.48
TMEM116-215ENST00000552374 MBTPS2O43462 519 aa12.03□□□□□ -0.48
TMEM116-215ENST00000552374 GLP2RO95838 553 aa12.03□□□□□ -0.48
TMEM116-215ENST00000552374 BMP15O95972 392 aa12.03□□□□□ -0.48
TMEM116-215ENST00000552374 NPTX2P47972 431 aa12.03□□□□□ -0.48
TMEM116-215ENST00000552374 CEBPZQ03701 1054 aaKnown RBP12.03□□□□□ -0.48
TMEM116-215ENST00000552374 FAM173BQ6P4H8 233 aa12.03□□□□□ -0.48
TMEM116-215ENST00000552374 DAW1Q8N136 415 aa12.03□□□□□ -0.48
TMEM116-215ENST00000552374 GJD3Q8N144 294 aa12.03□□□□□ -0.48
TMEM116-215ENST00000552374 SYT2Q8N9I0 419 aaPredicted RBP12.03□□□□□ -0.48
TMEM116-215ENST00000552374 VN1R2Q8NFZ6 395 aa12.03□□□□□ -0.48
TMEM116-215ENST00000552374 RASSF8Q8NHQ8 419 aa12.03□□□□□ -0.48
TMEM116-215ENST00000552374 CALML4Q96GE6 196 aa12.03□□□□□ -0.48
TMEM116-215ENST00000552374 INTS4Q96HW7 963 aaKnown RBP12.03□□□□□ -0.48
TMEM116-215ENST00000552374 MSLNLQ96KJ4 702 aa12.03□□□□□ -0.48
TMEM116-215ENST00000552374 AK8Q96MA6 479 aa12.03□□□□□ -0.48
TMEM116-215ENST00000552374 ADPGKQ9BRR6 497 aa12.03□□□□□ -0.48
TMEM116-215ENST00000552374 TMEM175Q9BSA9 504 aa12.03□□□□□ -0.48
TMEM116-215ENST00000552374 APOL5Q9BWW9 433 aa12.03□□□□□ -0.48
TMEM116-215ENST00000552374 PDZD7Q9H5P4 517 aa12.03□□□□□ -0.48
TMEM116-215ENST00000552374 KMT5AQ9NQR1 393 aa12.03□□□□□ -0.48
TMEM116-215ENST00000552374 SNTG2Q9NY99 539 aa12.03□□□□□ -0.48
TMEM116-215ENST00000552374 PRG3Q9Y2Y8 225 aaPredicted RBP12.03□□□□□ -0.48
TMEM116-215ENST00000552374 CLIC4Q9Y696 253 aa12.03□□□□□ -0.48
TMEM116-215ENST00000552374 NPHP3-ACAD11A0A0J9YXS1 232 aa12.03□□□□□ -0.48
TMEM116-215ENST00000552374 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP12.03□□□□□ -0.48
TMEM116-215ENST00000552374 NR1I2O75469 434 aa12.03□□□□□ -0.48
TMEM116-215ENST00000552374 PLA2G4BP0C869 781 aa12.03□□□□□ -0.48
TMEM116-215ENST00000552374 MARCKSP29966 332 aaPredicted RBP12.03□□□□□ -0.48
TMEM116-215ENST00000552374 GRIN1Q05586 938 aa12.03□□□□□ -0.48
TMEM116-215ENST00000552374 DMP1Q13316 513 aaPredicted RBP12.03□□□□□ -0.48
TMEM116-215ENST00000552374 SMAD4Q13485 552 aaKnown RBP12.03□□□□□ -0.48
TMEM116-215ENST00000552374 SPECC1Q5M775 1068 aa12.03□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 18.1 ms