RNA–Protein interactions for RNA: ENST00000550325.5

VDR-208, Transcript of vitamin D receptor, humanhuman

TSL 1 (best) BASIC

Gene VDR, Length 3,925 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VDR-208ENST00000550325 COG5Q9UP83 839 aa12.97□□□□□ -0.33
VDR-208ENST00000550325 SYNGAP1Q96PV0 1343 aa12.97□□□□□ -0.33
VDR-208ENST00000550325 CALUO43852 315 aaPredicted RBP12.97□□□□□ -0.33
VDR-208ENST00000550325 KRT36O76013 467 aa12.97□□□□□ -0.33
VDR-208ENST00000550325 BAG2O95816 211 aa12.97□□□□□ -0.33
VDR-208ENST00000550325 FTLP02792 175 aaPredicted RBP12.97□□□□□ -0.33
VDR-208ENST00000550325 PYGMP11217 842 aa12.97□□□□□ -0.33
VDR-208ENST00000550325 KCNA1Q09470 495 aa12.97□□□□□ -0.33
VDR-208ENST00000550325 OVGP1Q12889 678 aa12.97□□□□□ -0.33
VDR-208ENST00000550325 MTFR1Q15390 333 aa12.97□□□□□ -0.33
VDR-208ENST00000550325 KHDC1Q4VXA5 237 aaKnown RBP12.97□□□□□ -0.33
VDR-208ENST00000550325 CGB2Q6NT52 195 aa12.97□□□□□ -0.33
VDR-208ENST00000550325 RNF207Q6ZRF8 634 aa12.97□□□□□ -0.33
VDR-208ENST00000550325 ARHGAP27Q6ZUM4 889 aa12.97□□□□□ -0.33
VDR-208ENST00000550325 PHC3Q8NDX5 983 aa12.97□□□□□ -0.33
VDR-208ENST00000550325 MAIP1Q8WWC4 291 aa12.97□□□□□ -0.33
VDR-208ENST00000550325 CCDC77Q9BR77 488 aa12.97□□□□□ -0.33
VDR-208ENST00000550325 MOV10L1Q9BXT6 1211 aaKnown RBP12.97□□□□□ -0.33
VDR-208ENST00000550325 CHKBQ9Y259 395 aa12.97□□□□□ -0.33
VDR-208ENST00000550325 CLDN3O15551 220 aa12.96□□□□□ -0.33
VDR-208ENST00000550325 NR3C1P04150 777 aa12.96□□□□□ -0.33
VDR-208ENST00000550325 COILP38432 576 aaPredicted RBP12.96□□□□□ -0.33
VDR-208ENST00000550325 SGO2Q562F6 1265 aa12.96□□□□□ -0.33
VDR-208ENST00000550325 HHATQ5VTY9 493 aa12.96□□□□□ -0.33
VDR-208ENST00000550325 ASAP3Q8TDY4 903 aa12.96□□□□□ -0.33
VDR-208ENST00000550325 RPGRQ92834 1020 aaKnown RBP12.96□□□□□ -0.33
VDR-208ENST00000550325 MTMR9Q96QG7 549 aa12.96□□□□□ -0.33
VDR-208ENST00000550325 TMX4Q9H1E5 349 aaPredicted RBP12.96□□□□□ -0.33
VDR-208ENST00000550325 USP54Q70EL1 1684 aa12.96□□□□□ -0.33
VDR-208ENST00000550325 A0A0G2JND7 137 aa12.96□□□□□ -0.33
VDR-208ENST00000550325 NPTXRO95502 500 aa12.96□□□□□ -0.33
VDR-208ENST00000550325 SOX5P35711 763 aa12.96□□□□□ -0.33
VDR-208ENST00000550325 PTGIRP43119 386 aa12.96□□□□□ -0.33
VDR-208ENST00000550325 HS2ST1Q7LGA3 356 aa12.96□□□□□ -0.33
VDR-208ENST00000550325 ITFG2Q969R8 447 aa12.96□□□□□ -0.33
VDR-208ENST00000550325 FAM84BQ96KN1 310 aaPredicted RBP12.96□□□□□ -0.33
VDR-208ENST00000550325 MAGEB18Q96M61 343 aa12.96□□□□□ -0.33
VDR-208ENST00000550325 EYA3Q99504 573 aa12.96□□□□□ -0.33
VDR-208ENST00000550325 NAALADL1Q9UQQ1 740 aa12.96□□□□□ -0.33
VDR-208ENST00000550325 TBCAO75347 108 aaKnown RBP12.96□□□□□ -0.34
VDR-208ENST00000550325 TMEM253P0C7T8 217 aa12.96□□□□□ -0.34
VDR-208ENST00000550325 CA4P22748 312 aa12.96□□□□□ -0.34
VDR-208ENST00000550325 FXR2P51116 673 aaKnown RBP eCLIP12.96□□□□□ -0.34
VDR-208ENST00000550325 SCNN1BP51168 640 aa12.96□□□□□ -0.34
VDR-208ENST00000550325 KNOP1Q1ED39 458 aaKnown RBP12.96□□□□□ -0.34
VDR-208ENST00000550325 SLC20A1Q8WUM9 679 aa12.96□□□□□ -0.34
VDR-208ENST00000550325 KCTD10Q9H3F6 313 aa12.96□□□□□ -0.34
VDR-208ENST00000550325 PCMTD2Q9NV79 361 aa12.96□□□□□ -0.34
VDR-208ENST00000550325 MYH3P11055 1940 aa12.96□□□□□ -0.34
VDR-208ENST00000550325 RSPH10B2B2RC85 870 aa12.95□□□□□ -0.34
VDR-208ENST00000550325 RSPH10BP0C881 870 aa12.95□□□□□ -0.34
VDR-208ENST00000550325 VCAM1P19320 739 aa12.95□□□□□ -0.34
VDR-208ENST00000550325 TAC1P20366 129 aa12.95□□□□□ -0.34
VDR-208ENST00000550325 RPL13P26373 211 aaKnown RBP12.95□□□□□ -0.34
VDR-208ENST00000550325 VHLP40337 213 aa12.95□□□□□ -0.34
VDR-208ENST00000550325 ZC2HC1CQ53FD0 456 aaPredicted RBP12.95□□□□□ -0.34
VDR-208ENST00000550325 CFAP157Q5JU67 520 aa12.95□□□□□ -0.34
VDR-208ENST00000550325 SPDYCQ5MJ68 293 aa12.95□□□□□ -0.34
VDR-208ENST00000550325 MTDHQ86UE4 582 aaKnown RBP12.95□□□□□ -0.34
VDR-208ENST00000550325 SERPINB12Q96P63 405 aa12.95□□□□□ -0.34
VDR-208ENST00000550325 ANAPC5Q9UJX4 755 aa12.95□□□□□ -0.34
VDR-208ENST00000550325 DYNC1LI1Q9Y6G9 523 aaKnown RBP12.95□□□□□ -0.34
VDR-208ENST00000550325 DUOX1Q9NRD9 1551 aa12.95□□□□□ -0.34
VDR-208ENST00000550325 PARP4Q9UKK3 1724 aaKnown RBP12.95□□□□□ -0.34
VDR-208ENST00000550325 PALM3A6NDB9 673 aaPredicted RBP12.95□□□□□ -0.34
VDR-208ENST00000550325 TTLL1O95922 423 aa12.95□□□□□ -0.34
VDR-208ENST00000550325 CCNB1P14635 433 aa12.95□□□□□ -0.34
VDR-208ENST00000550325 MARK3P27448 753 aa12.95□□□□□ -0.34
VDR-208ENST00000550325 EPHA7Q15375 998 aa12.95□□□□□ -0.34
VDR-208ENST00000550325 TBC1D25Q3MII6 688 aa12.95□□□□□ -0.34
VDR-208ENST00000550325 PPP1R21Q6ZMI0 780 aa12.95□□□□□ -0.34
VDR-208ENST00000550325 GSTA5Q7RTV2 222 aa12.95□□□□□ -0.34
VDR-208ENST00000550325 TRMT1LQ7Z2T5 733 aaKnown RBP12.95□□□□□ -0.34
VDR-208ENST00000550325 CLEC10AQ8IUN9 316 aa12.95□□□□□ -0.34
VDR-208ENST00000550325 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP12.95□□□□□ -0.34
VDR-208ENST00000550325 PDCD7Q8N8D1 485 aaKnown RBP12.95□□□□□ -0.34
VDR-208ENST00000550325 DRAXINQ8NBI3 349 aaPredicted RBP12.95□□□□□ -0.34
VDR-208ENST00000550325 ROPN1BQ9BZX4 212 aaPredicted RBP12.95□□□□□ -0.34
VDR-208ENST00000550325 ROPN1Q9HAT0 212 aaPredicted RBP12.95□□□□□ -0.34
VDR-208ENST00000550325 A0A0A6YYK5 440 aaPredicted RBP12.95□□□□□ -0.34
VDR-208ENST00000550325 CREB3O43889 395 aa12.95□□□□□ -0.34
VDR-208ENST00000550325 PYGBP11216 843 aa12.95□□□□□ -0.34
VDR-208ENST00000550325 CYP11B2P19099 503 aa12.95□□□□□ -0.34
VDR-208ENST00000550325 GSTT1P30711 240 aa12.95□□□□□ -0.34
VDR-208ENST00000550325 ITGA8P53708 1063 aa12.95□□□□□ -0.34
VDR-208ENST00000550325 KPNB1Q14974 876 aaKnown RBP12.95□□□□□ -0.34
VDR-208ENST00000550325 RNF43Q68DV7 783 aa12.95□□□□□ -0.34
VDR-208ENST00000550325 ANKLE1Q8NAG6 615 aa12.95□□□□□ -0.34
VDR-208ENST00000550325 FBXO41Q8TF61 875 aa12.95□□□□□ -0.34
VDR-208ENST00000550325 HEMGNQ9BXL5 484 aa12.95□□□□□ -0.34
VDR-208ENST00000550325 DCTN3O75935 186 aa12.94□□□□□ -0.34
VDR-208ENST00000550325 FGRP09769 529 aa12.94□□□□□ -0.34
VDR-208ENST00000550325 ZBTB48P10074 688 aaPredicted RBP12.94□□□□□ -0.34
VDR-208ENST00000550325 RFC4P35249 363 aa12.94□□□□□ -0.34
VDR-208ENST00000550325 SLC16A2P36021 539 aa12.94□□□□□ -0.34
VDR-208ENST00000550325 CPA2P48052 419 aa12.94□□□□□ -0.34
VDR-208ENST00000550325 FAM182BQ5T319 152 aa12.94□□□□□ -0.34
VDR-208ENST00000550325 DSTYKQ6XUX3 929 aa12.94□□□□□ -0.34
VDR-208ENST00000550325 TRMT10CQ7L0Y3 403 aaKnown RBP12.94□□□□□ -0.34
VDR-208ENST00000550325 FAM186BQ8IYM0 893 aa12.94□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 17.1 ms