RNA–Protein interactions for RNA: ENST00000548645.5

NPAS3-206, Transcript of neuronal PAS domain protein 3, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene NPAS3, Length 2,926 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPAS3-206ENST00000548645 ACSL3O95573 720 aa24.82■■□□□ 1.56
NPAS3-206ENST00000548645 ECEL1O95672 775 aa24.82■■□□□ 1.56
NPAS3-206ENST00000548645 MYL7Q01449 175 aa24.82■■□□□ 1.56
NPAS3-206ENST00000548645 CYP4A11Q02928 519 aa24.82■■□□□ 1.56
NPAS3-206ENST00000548645 Q4G0T1 1027 aa24.82■■□□□ 1.56
NPAS3-206ENST00000548645 RAB3IPQ96QF0 476 aaPredicted RBP24.82■■□□□ 1.56
NPAS3-206ENST00000548645 FOXN3O00409 490 aaPredicted RBP24.82■■□□□ 1.56
NPAS3-206ENST00000548645 PYGMP11217 842 aa24.82■■□□□ 1.56
NPAS3-206ENST00000548645 CCNB1P14635 433 aa24.82■■□□□ 1.56
NPAS3-206ENST00000548645 MESDQ14696 234 aa24.82■■□□□ 1.56
NPAS3-206ENST00000548645 HS2ST1Q7LGA3 356 aa24.82■■□□□ 1.56
NPAS3-206ENST00000548645 FAM20AQ96MK3 541 aa24.82■■□□□ 1.56
NPAS3-206ENST00000548645 SFI1A8K8P3 1242 aa24.81■■□□□ 1.56
NPAS3-206ENST00000548645 LRRN2O75325 713 aa24.81■■□□□ 1.56
NPAS3-206ENST00000548645 BCRP11274 1271 aa24.81■■□□□ 1.56
NPAS3-206ENST00000548645 CREB1P16220 341 aa24.81■■□□□ 1.56
NPAS3-206ENST00000548645 QRICH1Q2TAL8 776 aa24.81■■□□□ 1.56
NPAS3-206ENST00000548645 RNF43Q68DV7 783 aa24.81■■□□□ 1.56
NPAS3-206ENST00000548645 CDCA2Q69YH5 1023 aaPredicted RBP24.81■■□□□ 1.56
NPAS3-206ENST00000548645 MIGA2Q7L4E1 593 aa24.81■■□□□ 1.56
NPAS3-206ENST00000548645 MYCT1Q8N699 235 aa24.81■■□□□ 1.56
NPAS3-206ENST00000548645 WHRNQ9P202 907 aa24.81■■□□□ 1.56
NPAS3-206ENST00000548645 GAKO14976 1311 aa24.81■■□□□ 1.56
NPAS3-206ENST00000548645 GRAPQ13588 217 aa24.81■■□□□ 1.56
NPAS3-206ENST00000548645 NFIXQ14938 502 aa24.81■■□□□ 1.56
NPAS3-206ENST00000548645 SLC15A2Q16348 729 aa24.81■■□□□ 1.56
NPAS3-206ENST00000548645 MIS18BP1Q6P0N0 1132 aa24.81■■□□□ 1.56
NPAS3-206ENST00000548645 GRAPLQ8TC17 118 aaPredicted RBP24.81■■□□□ 1.56
NPAS3-206ENST00000548645 CRYGNQ8WXF5 182 aa24.81■■□□□ 1.56
NPAS3-206ENST00000548645 TGS1Q96RS0 853 aaKnown RBP24.81■■□□□ 1.56
NPAS3-206ENST00000548645 TRIM49P0CI25 452 aa24.8■■□□□ 1.56
NPAS3-206ENST00000548645 TRIM49CP0CI26 452 aa24.8■■□□□ 1.56
NPAS3-206ENST00000548645 NMT1P30419 496 aaKnown RBP24.8■■□□□ 1.56
NPAS3-206ENST00000548645 STX2P32856 288 aa24.8■■□□□ 1.56
NPAS3-206ENST00000548645 KCNJ1P48048 391 aa24.8■■□□□ 1.56
NPAS3-206ENST00000548645 BLMHQ13867 455 aa24.8■■□□□ 1.56
NPAS3-206ENST00000548645 C12orf50Q8NA57 414 aaPredicted RBP24.8■■□□□ 1.56
NPAS3-206ENST00000548645 GDAP1Q8TB36 358 aa24.8■■□□□ 1.56
NPAS3-206ENST00000548645 SLC20A1Q8WUM9 679 aa24.8■■□□□ 1.56
NPAS3-206ENST00000548645 SAAL1Q96ER3 474 aa24.8■■□□□ 1.56
NPAS3-206ENST00000548645 IKZF4Q9H2S9 585 aa24.8■■□□□ 1.56
NPAS3-206ENST00000548645 MLXIPLQ9NP71 852 aa24.8■■□□□ 1.56
NPAS3-206ENST00000548645 TCRBV7S2A1N4TA0A589 114 aa24.8■■□□□ 1.56
NPAS3-206ENST00000548645 BRAFP15056 766 aa24.8■■□□□ 1.56
NPAS3-206ENST00000548645 CCDC15Q0P6D6 951 aa24.8■■□□□ 1.56
NPAS3-206ENST00000548645 PHLDB3Q6NSJ2 640 aa24.8■■□□□ 1.56
NPAS3-206ENST00000548645 RINT1Q6NUQ1 792 aa24.8■■□□□ 1.56
NPAS3-206ENST00000548645 SMIM5Q71RC9 77 aa24.8■■□□□ 1.56
NPAS3-206ENST00000548645 SLC51AQ86UW1 340 aa24.8■■□□□ 1.56
NPAS3-206ENST00000548645 FBF1Q8TES7 1133 aa24.8■■□□□ 1.56
NPAS3-206ENST00000548645 GRAMD1AQ96CP6 724 aa24.8■■□□□ 1.56
NPAS3-206ENST00000548645 POLR3CQ9BUI4 534 aaPredicted RBP24.8■■□□□ 1.56
NPAS3-206ENST00000548645 SRP68Q9UHB9 627 aaKnown RBP24.8■■□□□ 1.56
NPAS3-206ENST00000548645 PICALMQ13492 652 aa24.79■■□□□ 1.56
NPAS3-206ENST00000548645 KCTD17Q8N5Z5 321 aa24.79■■□□□ 1.56
NPAS3-206ENST00000548645 RMDN2Q96LZ7 410 aa24.79■■□□□ 1.56
NPAS3-206ENST00000548645 TRIM33Q9UPN9 1127 aa24.79■■□□□ 1.56
NPAS3-206ENST00000548645 MKRN4PQ13434 485 aaPredicted RBP24.79■■□□□ 1.56
NPAS3-206ENST00000548645 ZC2HC1CQ53FD0 456 aaPredicted RBP24.79■■□□□ 1.56
NPAS3-206ENST00000548645 MFSD14BQ5SR56 506 aa24.79■■□□□ 1.56
NPAS3-206ENST00000548645 ARHGEF18Q6ZSZ5 1173 aa24.79■■□□□ 1.56
NPAS3-206ENST00000548645 MAGEB18Q96M61 343 aa24.79■■□□□ 1.56
NPAS3-206ENST00000548645 UNC5CO95185 931 aa24.79■■□□□ 1.56
NPAS3-206ENST00000548645 CYP2J2P51589 502 aa24.79■■□□□ 1.56
NPAS3-206ENST00000548645 ICA1Q05084 483 aa24.79■■□□□ 1.56
NPAS3-206ENST00000548645 CD101Q93033 1021 aa24.79■■□□□ 1.56
NPAS3-206ENST00000548645 VTI1AQ96AJ9 217 aa24.79■■□□□ 1.56
NPAS3-206ENST00000548645 LRRC19Q9H756 370 aa24.79■■□□□ 1.56
NPAS3-206ENST00000548645 AAASQ9NRG9 546 aa24.79■■□□□ 1.56
NPAS3-206ENST00000548645 TXLNGQ9NUQ3 528 aa24.79■■□□□ 1.56
NPAS3-206ENST00000548645 MEIS2O14770 477 aa24.78■■□□□ 1.56
NPAS3-206ENST00000548645 MTA2O94776 668 aa24.78■■□□□ 1.56
NPAS3-206ENST00000548645 COG2Q14746 738 aa24.78■■□□□ 1.56
NPAS3-206ENST00000548645 SIX1Q15475 284 aaPredicted RBP24.78■■□□□ 1.56
NPAS3-206ENST00000548645 LENG9Q96B70 501 aa24.78■■□□□ 1.56
NPAS3-206ENST00000548645 SPOPO43791 374 aa24.78■■□□□ 1.56
NPAS3-206ENST00000548645 CDC25CP30307 473 aa24.78■■□□□ 1.56
NPAS3-206ENST00000548645 ACVR2BQ13705 512 aa24.78■■□□□ 1.56
NPAS3-206ENST00000548645 RNF207Q6ZRF8 634 aa24.78■■□□□ 1.56
NPAS3-206ENST00000548645 STXBP4Q6ZWJ1 553 aa24.78■■□□□ 1.56
NPAS3-206ENST00000548645 EIF2AK1Q9BQI3 630 aaKnown RBP24.78■■□□□ 1.56
NPAS3-206ENST00000548645 ETNK1Q9HBU6 452 aa24.78■■□□□ 1.56
NPAS3-206ENST00000548645 SPATS2LQ9NUQ6 558 aaKnown RBP24.78■■□□□ 1.56
NPAS3-206ENST00000548645 DMAC2Q9NW81 257 aa24.78■■□□□ 1.56
NPAS3-206ENST00000548645 NKIRAS1Q9NYS0 192 aa24.78■■□□□ 1.56
NPAS3-206ENST00000548645 UBE4BO95155 1302 aa24.77■■□□□ 1.56
NPAS3-206ENST00000548645 CNTNAP4Q9C0A0 1308 aa24.77■■□□□ 1.56
NPAS3-206ENST00000548645 HIP1RO75146 1068 aa24.77■■□□□ 1.56
NPAS3-206ENST00000548645 ITIH2P19823 946 aa24.77■■□□□ 1.56
NPAS3-206ENST00000548645 MTFR1Q15390 333 aa24.77■■□□□ 1.56
NPAS3-206ENST00000548645 TAF11Q15544 211 aa24.77■■□□□ 1.56
NPAS3-206ENST00000548645 ZNF483Q8TF39 744 aaPredicted RBP24.77■■□□□ 1.56
NPAS3-206ENST00000548645 DNAJC18Q9H819 358 aa24.77■■□□□ 1.56
NPAS3-206ENST00000548645 SERPINB13Q9UIV8 391 aa24.77■■□□□ 1.56
NPAS3-206ENST00000548645 TTC4O95801 387 aa24.77■■□□□ 1.56
NPAS3-206ENST00000548645 SLCO2A1Q92959 643 aa24.77■■□□□ 1.56
NPAS3-206ENST00000548645 PARVGQ9HBI0 331 aa24.77■■□□□ 1.56
NPAS3-206ENST00000548645 GH1P01241 217 aa24.76■■□□□ 1.55
NPAS3-206ENST00000548645 IL1R1P14778 569 aa24.76■■□□□ 1.55
NPAS3-206ENST00000548645 MPP2Q14168 576 aa24.76■■□□□ 1.55
Retrieved 100 of 20,778 RNA–protein pairs in 17.3 ms