RNA–Protein interactions for RNA: ENST00000548379.5

PTCH1-216, Transcript of patched 1, humanhuman

TSL 4

Gene PTCH1, Length 548 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCH1-216ENST00000548379 DNM3Q9UQ16 869 aa5.29□□□□□ -1.56
PTCH1-216ENST00000548379 SIK3Q9Y2K2 1263 aa5.29□□□□□ -1.56
PTCH1-216ENST00000548379 CFAP20Q9Y6A4 193 aaKnown RBP5.29□□□□□ -1.56
PTCH1-216ENST00000548379 A0A1B0GTL3 188 aa5.28□□□□□ -1.56
PTCH1-216ENST00000548379 A6NNZ2 444 aa5.28□□□□□ -1.56
PTCH1-216ENST00000548379 PHF2O75151 1096 aa5.28□□□□□ -1.56
PTCH1-216ENST00000548379 MAP4K4O95819 1239 aaPredicted RBP5.28□□□□□ -1.56
PTCH1-216ENST00000548379 HRGP04196 525 aa5.28□□□□□ -1.56
PTCH1-216ENST00000548379 SLC6A9P48067 706 aa5.28□□□□□ -1.56
PTCH1-216ENST00000548379 AFF3P51826 1226 aaKnown RBP5.28□□□□□ -1.56
PTCH1-216ENST00000548379 USP14P54578 494 aa5.28□□□□□ -1.56
PTCH1-216ENST00000548379 PURAQ00577 322 aaKnown RBP5.28□□□□□ -1.56
PTCH1-216ENST00000548379 ADAM15Q13444 863 aa5.28□□□□□ -1.56
PTCH1-216ENST00000548379 NFYCQ13952 458 aa5.28□□□□□ -1.56
PTCH1-216ENST00000548379 USP10Q14694 798 aaKnown RBP5.28□□□□□ -1.56
PTCH1-216ENST00000548379 KCNA10Q16322 511 aa5.28□□□□□ -1.56
PTCH1-216ENST00000548379 MAP9Q49MG5 647 aa5.28□□□□□ -1.56
PTCH1-216ENST00000548379 MCTP2Q6DN12 878 aa5.28□□□□□ -1.56
PTCH1-216ENST00000548379 OVCH2Q7RTZ1 564 aa5.28□□□□□ -1.56
PTCH1-216ENST00000548379 ZNF761Q86XN6 746 aaPredicted RBP5.28□□□□□ -1.56
PTCH1-216ENST00000548379 RTKN2Q8IZC4 609 aa5.28□□□□□ -1.56
PTCH1-216ENST00000548379 FAM43AQ8N2R8 423 aa5.28□□□□□ -1.56
PTCH1-216ENST00000548379 PLA2G15Q8NCC3 412 aa5.28□□□□□ -1.56
PTCH1-216ENST00000548379 NSUN6Q8TEA1 469 aaKnown RBP5.28□□□□□ -1.56
PTCH1-216ENST00000548379 SLC39A13Q96H72 371 aa5.28□□□□□ -1.56
PTCH1-216ENST00000548379 SLC38A3Q99624 504 aa5.28□□□□□ -1.56
PTCH1-216ENST00000548379 KIAA1683Q9H0B3 1180 aa5.28□□□□□ -1.56
PTCH1-216ENST00000548379 BARX1Q9HBU1 254 aaPredicted RBP5.28□□□□□ -1.56
PTCH1-216ENST00000548379 RNF114Q9Y508 228 aa5.28□□□□□ -1.56
PTCH1-216ENST00000548379 PCDHB1Q9Y5F3 818 aa5.28□□□□□ -1.56
PTCH1-216ENST00000548379 THOC2Q8NI27 1593 aaKnown RBP5.28□□□□□ -1.56
PTCH1-216ENST00000548379 DAPK3O43293 454 aa5.27□□□□□ -1.57
PTCH1-216ENST00000548379 SGTAO43765 313 aa5.27□□□□□ -1.57
PTCH1-216ENST00000548379 CTNND1O60716 968 aaKnown RBP5.27□□□□□ -1.57
PTCH1-216ENST00000548379 DTNBO60941 627 aa5.27□□□□□ -1.57
PTCH1-216ENST00000548379 TUSC2O75896 110 aa5.27□□□□□ -1.57
PTCH1-216ENST00000548379 ALDH1A2O94788 518 aa5.27□□□□□ -1.57
PTCH1-216ENST00000548379 ENDOD1O94919 500 aa5.27□□□□□ -1.57
PTCH1-216ENST00000548379 TRIM27P14373 513 aa5.27□□□□□ -1.57
PTCH1-216ENST00000548379 KIR2DL3P43628 341 aa5.27□□□□□ -1.57
PTCH1-216ENST00000548379 MEOX1P50221 254 aa5.27□□□□□ -1.57
PTCH1-216ENST00000548379 ADCY7P51828 1080 aa5.27□□□□□ -1.57
PTCH1-216ENST00000548379 IL10RAQ13651 578 aa5.27□□□□□ -1.57
PTCH1-216ENST00000548379 TBR1Q16650 682 aa5.27□□□□□ -1.57
PTCH1-216ENST00000548379 PGS1Q32NB8 556 aa5.27□□□□□ -1.57
PTCH1-216ENST00000548379 ARHGAP29Q52LW3 1261 aa5.27□□□□□ -1.57
PTCH1-216ENST00000548379 ZMAT1Q5H9K5 638 aa5.27□□□□□ -1.57
PTCH1-216ENST00000548379 ZNF648Q5T619 568 aaPredicted RBP5.27□□□□□ -1.57
PTCH1-216ENST00000548379 FAM180AQ6UWF9 173 aa5.27□□□□□ -1.57
PTCH1-216ENST00000548379 ZBTB34Q8NCN2 500 aa5.27□□□□□ -1.57
PTCH1-216ENST00000548379 FBXO41Q8TF61 875 aa5.27□□□□□ -1.57
PTCH1-216ENST00000548379 TIFAQ96CG3 184 aa5.27□□□□□ -1.57
PTCH1-216ENST00000548379 SLC7A6OSQ96CW6 309 aaPredicted RBP5.27□□□□□ -1.57
PTCH1-216ENST00000548379 UIMC1Q96RL1 719 aa5.27□□□□□ -1.57
PTCH1-216ENST00000548379 DMRTA2Q96SC8 542 aa5.27□□□□□ -1.57
PTCH1-216ENST00000548379 SARGQ9BW04 601 aa5.27□□□□□ -1.57
PTCH1-216ENST00000548379 PEG3Q9GZU2 1588 aa5.27□□□□□ -1.57
PTCH1-216ENST00000548379 C14orf93Q9H972 538 aaKnown RBP5.27□□□□□ -1.57
PTCH1-216ENST00000548379 BCO1Q9HAY6 547 aa5.27□□□□□ -1.57
PTCH1-216ENST00000548379 JADE2Q9NQC1 790 aa5.27□□□□□ -1.57
PTCH1-216ENST00000548379 NIPSNAP3AQ9UFN0 247 aaPredicted RBP5.27□□□□□ -1.57
PTCH1-216ENST00000548379 TRPS1Q9UHF7 1281 aa5.27□□□□□ -1.57
PTCH1-216ENST00000548379 PMS2P1A4D2B8 440 aa5.26□□□□□ -1.57
PTCH1-216ENST00000548379 NPIPB6E9PJ23 425 aa5.26□□□□□ -1.57
PTCH1-216ENST00000548379 AKR1B10O60218 316 aa5.26□□□□□ -1.57
PTCH1-216ENST00000548379 UBXN7O94888 489 aa5.26□□□□□ -1.57
PTCH1-216ENST00000548379 CYP1A1P04798 512 aaPredicted RBP5.26□□□□□ -1.57
PTCH1-216ENST00000548379 KRT18P05783 430 aaKnown RBP5.26□□□□□ -1.57
PTCH1-216ENST00000548379 MYL1P05976 194 aa5.26□□□□□ -1.57
PTCH1-216ENST00000548379 CRHR1P34998 444 aa5.26□□□□□ -1.57
PTCH1-216ENST00000548379 NOMO1Q15155 1222 aa5.26□□□□□ -1.57
PTCH1-216ENST00000548379 GAGE13Q4V321 117 aa5.26□□□□□ -1.57
PTCH1-216ENST00000548379 USP30Q70CQ3 517 aa5.26□□□□□ -1.57
PTCH1-216ENST00000548379 MIGA2Q7L4E1 593 aa5.26□□□□□ -1.57
PTCH1-216ENST00000548379 DENND1CQ8IV53 801 aa5.26□□□□□ -1.57
PTCH1-216ENST00000548379 TMEM151BQ8IW70 566 aa5.26□□□□□ -1.57
PTCH1-216ENST00000548379 GRAMD1CQ8IYS0 662 aa5.26□□□□□ -1.57
PTCH1-216ENST00000548379 OR7D4Q8NG98 312 aa5.26□□□□□ -1.57
PTCH1-216ENST00000548379 PPP1R35Q8TAP8 253 aa5.26□□□□□ -1.57
PTCH1-216ENST00000548379 ZNF480Q8WV37 535 aa5.26□□□□□ -1.57
PTCH1-216ENST00000548379 CFHR4Q92496 578 aa5.26□□□□□ -1.57
PTCH1-216ENST00000548379 LCORQ96JN0 433 aaPredicted RBP5.26□□□□□ -1.57
PTCH1-216ENST00000548379 C7orf25Q9BPX7 421 aa5.26□□□□□ -1.57
PTCH1-216ENST00000548379 LRFN3Q9BTN0 628 aa5.26□□□□□ -1.57
PTCH1-216ENST00000548379 ENKD1Q9H0I2 346 aa5.26□□□□□ -1.57
PTCH1-216ENST00000548379 SLC6A15Q9H2J7 730 aa5.26□□□□□ -1.57
PTCH1-216ENST00000548379 TMEM60Q9H2L4 133 aa5.26□□□□□ -1.57
PTCH1-216ENST00000548379 CEP164Q9UPV0 1460 aa5.26□□□□□ -1.57
PTCH1-216ENST00000548379 FRMPD2Q68DX3 1309 aaPredicted RBP5.25□□□□□ -1.57
PTCH1-216ENST00000548379 SLC16A6O15403 523 aa5.25□□□□□ -1.57
PTCH1-216ENST00000548379 ARHGAP6O43182 974 aa5.25□□□□□ -1.57
PTCH1-216ENST00000548379 B3GALT2O43825 422 aa5.25□□□□□ -1.57
PTCH1-216ENST00000548379 PRAMEF4O60810 478 aa5.25□□□□□ -1.57
PTCH1-216ENST00000548379 GASTP01350 101 aa5.25□□□□□ -1.57
PTCH1-216ENST00000548379 ALDH2P05091 517 aa5.25□□□□□ -1.57
PTCH1-216ENST00000548379 VSIG10L2P0DP72 767 aa5.25□□□□□ -1.57
PTCH1-216ENST00000548379 ECHS1P30084 290 aa5.25□□□□□ -1.57
PTCH1-216ENST00000548379 GUCY1A2P33402 732 aa5.25□□□□□ -1.57
PTCH1-216ENST00000548379 SREBF1P36956 1147 aa5.25□□□□□ -1.57
PTCH1-216ENST00000548379 IL12RB1P42701 662 aa5.25□□□□□ -1.57
Retrieved 100 of 20,778 RNA–protein pairs in 18.2 ms