RNA–Protein interactions for RNA: ENST00000547517.5

RAB5C-204, Transcript of RAB5C, member RAS oncogene family, humanhuman

TSL 1 (best) BASIC

Gene RAB5C, Length 1,167 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB5C-204ENST00000547517 A0A1B0GUA9 196 aa13.03□□□□□ -0.32
RAB5C-204ENST00000547517 ACKR2O00590 384 aa13.03□□□□□ -0.32
RAB5C-204ENST00000547517 N4BP3O15049 544 aa13.03□□□□□ -0.32
RAB5C-204ENST00000547517 SPTLC2O15270 562 aa13.03□□□□□ -0.32
RAB5C-204ENST00000547517 SLC16A4O15374 487 aa13.03□□□□□ -0.32
RAB5C-204ENST00000547517 OFD1O75665 1012 aa13.03□□□□□ -0.32
RAB5C-204ENST00000547517 FGF18O76093 207 aa13.03□□□□□ -0.32
RAB5C-204ENST00000547517 YEATS4O95619 227 aa13.03□□□□□ -0.32
RAB5C-204ENST00000547517 KRT18P05783 430 aaKnown RBP13.03□□□□□ -0.32
RAB5C-204ENST00000547517 PLS3P13797 630 aa13.03□□□□□ -0.32
RAB5C-204ENST00000547517 DNAJB1P25685 340 aa13.03□□□□□ -0.32
RAB5C-204ENST00000547517 MLH1P40692 756 aa13.03□□□□□ -0.32
RAB5C-204ENST00000547517 BECN1Q14457 450 aa13.03□□□□□ -0.32
RAB5C-204ENST00000547517 CSPP1Q1MSJ5 1256 aa13.03□□□□□ -0.32
RAB5C-204ENST00000547517 TCEAL5Q5H9L2 206 aa13.03□□□□□ -0.32
RAB5C-204ENST00000547517 KCNT2Q6UVM3 1135 aa13.03□□□□□ -0.32
RAB5C-204ENST00000547517 HACE1Q8IYU2 909 aa13.03□□□□□ -0.32
RAB5C-204ENST00000547517 POF1BQ8WVV4 589 aa13.03□□□□□ -0.32
RAB5C-204ENST00000547517 RSPH1Q8WYR4 309 aa13.03□□□□□ -0.32
RAB5C-204ENST00000547517 REEP2Q9BRK0 252 aa13.03□□□□□ -0.32
RAB5C-204ENST00000547517 GBP3Q9H0R5 595 aa13.03□□□□□ -0.32
RAB5C-204ENST00000547517 RNF39Q9H2S5 420 aa13.03□□□□□ -0.32
RAB5C-204ENST00000547517 NSUN3Q9H649 340 aaKnown RBP13.03□□□□□ -0.32
RAB5C-204ENST00000547517 C17orf75Q9HAS0 396 aa13.03□□□□□ -0.32
RAB5C-204ENST00000547517 ARHGAP28Q9P2N2 729 aa13.03□□□□□ -0.32
RAB5C-204ENST00000547517 K7ERI5 159 aa13.02□□□□□ -0.33
RAB5C-204ENST00000547517 PPP6R2O75170 966 aa13.02□□□□□ -0.33
RAB5C-204ENST00000547517 FAM13AO94988 1023 aa13.02□□□□□ -0.33
RAB5C-204ENST00000547517 POMCP01189 267 aa13.02□□□□□ -0.33
RAB5C-204ENST00000547517 AKAP5P24588 427 aa13.02□□□□□ -0.33
RAB5C-204ENST00000547517 PPM1AP35813 382 aa13.02□□□□□ -0.33
RAB5C-204ENST00000547517 AFF1P51825 1210 aaKnown RBP13.02□□□□□ -0.33
RAB5C-204ENST00000547517 BCAR1P56945 870 aa13.02□□□□□ -0.33
RAB5C-204ENST00000547517 DNM1Q05193 864 aaKnown RBP13.02□□□□□ -0.33
RAB5C-204ENST00000547517 ARSHQ5FYA8 562 aa13.02□□□□□ -0.33
RAB5C-204ENST00000547517 ATF7IP2Q5U623 682 aa13.02□□□□□ -0.33
RAB5C-204ENST00000547517 RRAGBQ5VZM2 374 aa13.02□□□□□ -0.33
RAB5C-204ENST00000547517 EEF1DP3Q658K8 133 aa13.02□□□□□ -0.33
RAB5C-204ENST00000547517 SPPL3Q8TCT6 385 aa13.02□□□□□ -0.33
RAB5C-204ENST00000547517 GAD1Q99259 594 aa13.02□□□□□ -0.33
RAB5C-204ENST00000547517 ADPGKQ9BRR6 497 aa13.02□□□□□ -0.33
RAB5C-204ENST00000547517 ZHX3Q9H4I2 956 aa13.02□□□□□ -0.33
RAB5C-204ENST00000547517 STK17AQ9UEE5 414 aa13.02□□□□□ -0.33
RAB5C-204ENST00000547517 ODF2LQ9ULJ1 636 aa13.02□□□□□ -0.33
RAB5C-204ENST00000547517 XIRP2A4UGR9 3374 aa13.01□□□□□ -0.33
RAB5C-204ENST00000547517 A0A087X0B3 334 aa13.01□□□□□ -0.33
RAB5C-204ENST00000547517 ARL5CA6NH57 179 aa13.01□□□□□ -0.33
RAB5C-204ENST00000547517 NT5C1B-RDH14C9J2C7 533 aa13.01□□□□□ -0.33
RAB5C-204ENST00000547517 B4GALT3O60512 393 aa13.01□□□□□ -0.33
RAB5C-204ENST00000547517 TBCAO75347 108 aaKnown RBP13.01□□□□□ -0.33
RAB5C-204ENST00000547517 IRS1P35568 1242 aa13.01□□□□□ -0.33
RAB5C-204ENST00000547517 STAT6P42226 847 aa13.01□□□□□ -0.33
RAB5C-204ENST00000547517 ALDH7A1P49419 539 aaKnown RBP13.01□□□□□ -0.33
RAB5C-204ENST00000547517 SCNN1GP51170 649 aa13.01□□□□□ -0.33
RAB5C-204ENST00000547517 CAMK1Q14012 370 aa13.01□□□□□ -0.33
RAB5C-204ENST00000547517 DCAF4L1Q3SXM0 396 aa13.01□□□□□ -0.33
RAB5C-204ENST00000547517 NT5DC1Q5TFE4 455 aa13.01□□□□□ -0.33
RAB5C-204ENST00000547517 TAS1R3Q7RTX0 852 aa13.01□□□□□ -0.33
RAB5C-204ENST00000547517 SLC39A11Q8N1S5 342 aa13.01□□□□□ -0.33
RAB5C-204ENST00000547517 SPIRE2Q8WWL2 714 aa13.01□□□□□ -0.33
RAB5C-204ENST00000547517 ZFP42Q96MM3 310 aa13.01□□□□□ -0.33
RAB5C-204ENST00000547517 MRPL4Q9BYD3 311 aaKnown RBP13.01□□□□□ -0.33
RAB5C-204ENST00000547517 NRDE2Q9H7Z3 1164 aa13.01□□□□□ -0.33
RAB5C-204ENST00000547517 UBN1Q9NPG3 1134 aa13.01□□□□□ -0.33
RAB5C-204ENST00000547517 TLR9Q9NR96 1032 aa13.01□□□□□ -0.33
RAB5C-204ENST00000547517 SPG21Q9NZD8 308 aa13.01□□□□□ -0.33
RAB5C-204ENST00000547517 KLK14Q9P0G3 267 aa13.01□□□□□ -0.33
RAB5C-204ENST00000547517 DNAJB4Q9UDY4 337 aa13.01□□□□□ -0.33
RAB5C-204ENST00000547517 PARP2Q9UGN5 583 aa13.01□□□□□ -0.33
RAB5C-204ENST00000547517 RBM19Q9Y4C8 960 aaKnown RBP13.01□□□□□ -0.33
RAB5C-204ENST00000547517 PCDHGC5Q9Y5F6 944 aa13.01□□□□□ -0.33
RAB5C-204ENST00000547517 SPTBN5Q9NRC6 3674 aaKnown RBP13□□□□□ -0.33
RAB5C-204ENST00000547517 MYH11P35749 1972 aa13□□□□□ -0.33
RAB5C-204ENST00000547517 K7ENM7 598 aa13□□□□□ -0.33
RAB5C-204ENST00000547517 CUTAO60888 179 aa13□□□□□ -0.33
RAB5C-204ENST00000547517 BRD1O95696 1058 aa13□□□□□ -0.33
RAB5C-204ENST00000547517 DDIT3P35638 169 aa13□□□□□ -0.33
RAB5C-204ENST00000547517 ME1P48163 572 aa13□□□□□ -0.33
RAB5C-204ENST00000547517 SMTNP53814 917 aa13□□□□□ -0.33
RAB5C-204ENST00000547517 TFF2Q03403 129 aa13□□□□□ -0.33
RAB5C-204ENST00000547517 UBE3AQ05086 875 aa13□□□□□ -0.33
RAB5C-204ENST00000547517 STRN3Q13033 797 aa13□□□□□ -0.33
RAB5C-204ENST00000547517 GIT2Q14161 759 aa13□□□□□ -0.33
RAB5C-204ENST00000547517 ZNF568Q3ZCX4 644 aa13□□□□□ -0.33
RAB5C-204ENST00000547517 CCDC73Q6ZRK6 1079 aa13□□□□□ -0.33
RAB5C-204ENST00000547517 ADGRD2Q7Z7M1 963 aa13□□□□□ -0.33
RAB5C-204ENST00000547517 TMEM173Q86WV6 379 aaPredicted RBP13□□□□□ -0.33
RAB5C-204ENST00000547517 ZNF280BQ86YH2 543 aa13□□□□□ -0.33
RAB5C-204ENST00000547517 MYCT1Q8N699 235 aa13□□□□□ -0.33
RAB5C-204ENST00000547517 PDILTQ8N807 584 aa13□□□□□ -0.33
RAB5C-204ENST00000547517 TMEM161BQ8NDZ6 487 aa13□□□□□ -0.33
RAB5C-204ENST00000547517 KCNG4Q8TDN1 519 aa13□□□□□ -0.33
RAB5C-204ENST00000547517 MICAL1Q8TDZ2 1067 aa13□□□□□ -0.33
RAB5C-204ENST00000547517 MRPS27Q92552 414 aaKnown RBP13□□□□□ -0.33
RAB5C-204ENST00000547517 HLA-CQ95604 372 aa13□□□□□ -0.33
RAB5C-204ENST00000547517 FAM193BQ96PV7 902 aaPredicted RBP13□□□□□ -0.33
RAB5C-204ENST00000547517 RPS6KC1Q96S38 1066 aa13□□□□□ -0.33
RAB5C-204ENST00000547517 TARS2Q9BW92 718 aaKnown RBP13□□□□□ -0.33
RAB5C-204ENST00000547517 PANK2Q9BZ23 570 aa13□□□□□ -0.33
RAB5C-204ENST00000547517 TMEM134Q9H6X4 195 aa13□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 29.8 ms