RNA–Protein interactions for RNA: ENST00000545689.2

COL4A6-209, Transcript of collagen type IV alpha 6 chain, humanhuman

TSL 1 (best) BASIC

Gene COL4A6, Length 6,380 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A6-209ENST00000545689 TTLL4Q14679 1199 aa13.32□□□□□ -0.28
COL4A6-209ENST00000545689 TRMT10CQ7L0Y3 403 aaKnown RBP13.32□□□□□ -0.28
COL4A6-209ENST00000545689 GSPT2Q8IYD1 628 aaKnown RBP13.32□□□□□ -0.28
COL4A6-209ENST00000545689 FBXL5Q9UKA1 691 aa13.32□□□□□ -0.28
COL4A6-209ENST00000545689 ZHX2Q9Y6X8 837 aa13.32□□□□□ -0.28
COL4A6-209ENST00000545689 CTDNEP1O95476 244 aa13.32□□□□□ -0.28
COL4A6-209ENST00000545689 VSNL1P62760 191 aa13.32□□□□□ -0.28
COL4A6-209ENST00000545689 GPR162Q16538 588 aa13.32□□□□□ -0.28
COL4A6-209ENST00000545689 MCUQ8NE86 351 aa13.32□□□□□ -0.28
COL4A6-209ENST00000545689 SPDL1Q96EA4 605 aa13.32□□□□□ -0.28
COL4A6-209ENST00000545689 HEMGNQ9BXL5 484 aa13.32□□□□□ -0.28
COL4A6-209ENST00000545689 WDR91A4D1P6 747 aa13.32□□□□□ -0.28
COL4A6-209ENST00000545689 PYGBP11216 843 aa13.32□□□□□ -0.28
COL4A6-209ENST00000545689 GYS2P54840 703 aa13.32□□□□□ -0.28
COL4A6-209ENST00000545689 CDO1Q16878 200 aa13.32□□□□□ -0.28
COL4A6-209ENST00000545689 ITPRIPL1Q6GPH6 555 aa13.32□□□□□ -0.28
COL4A6-209ENST00000545689 ACAD11Q709F0 780 aa13.32□□□□□ -0.28
COL4A6-209ENST00000545689 ST13P4Q8IZP2 240 aaPredicted RBP13.32□□□□□ -0.28
COL4A6-209ENST00000545689 ATL2Q8NHH9 583 aa13.32□□□□□ -0.28
COL4A6-209ENST00000545689 DAGLAQ9Y4D2 1042 aa13.32□□□□□ -0.28
COL4A6-209ENST00000545689 ADGRB1O14514 1584 aa13.32□□□□□ -0.28
COL4A6-209ENST00000545689 GSTA4O15217 222 aa13.32□□□□□ -0.28
COL4A6-209ENST00000545689 GYG2O15488 501 aa13.32□□□□□ -0.28
COL4A6-209ENST00000545689 C21orf2O43822 256 aa13.32□□□□□ -0.28
COL4A6-209ENST00000545689 HAUS5O94927 633 aa13.32□□□□□ -0.28
COL4A6-209ENST00000545689 NFKBIAP25963 317 aa13.32□□□□□ -0.28
COL4A6-209ENST00000545689 MARK3P27448 753 aa13.32□□□□□ -0.28
COL4A6-209ENST00000545689 HSPA9P38646 679 aaKnown RBP13.32□□□□□ -0.28
COL4A6-209ENST00000545689 MTF1Q14872 753 aa13.32□□□□□ -0.28
COL4A6-209ENST00000545689 LLGL1Q15334 1064 aa13.32□□□□□ -0.28
COL4A6-209ENST00000545689 NAB2Q15742 525 aa13.32□□□□□ -0.28
COL4A6-209ENST00000545689 TEDDM1Q5T9Z0 273 aa13.32□□□□□ -0.28
COL4A6-209ENST00000545689 AP1ARQ63HQ0 302 aa13.32□□□□□ -0.28
COL4A6-209ENST00000545689 SWSAP1Q6NVH7 229 aa13.32□□□□□ -0.28
COL4A6-209ENST00000545689 RCOR2Q8IZ40 523 aa13.32□□□□□ -0.28
COL4A6-209ENST00000545689 TTC17Q96AE7 1141 aa13.32□□□□□ -0.28
COL4A6-209ENST00000545689 RBAKQ9NYW8 714 aaPredicted RBP13.32□□□□□ -0.28
COL4A6-209ENST00000545689 AGO2Q9UKV8 859 aaKnown RBP13.32□□□□□ -0.28
COL4A6-209ENST00000545689 INTUQ9ULD6 942 aa13.32□□□□□ -0.28
COL4A6-209ENST00000545689 HUS1O60921 280 aa13.31□□□□□ -0.28
COL4A6-209ENST00000545689 BRAFP15056 766 aa13.31□□□□□ -0.28
COL4A6-209ENST00000545689 STILQ15468 1287 aa13.31□□□□□ -0.28
COL4A6-209ENST00000545689 AGBL2Q5U5Z8 902 aa13.31□□□□□ -0.28
COL4A6-209ENST00000545689 STRIP1Q5VSL9 837 aa13.31□□□□□ -0.28
COL4A6-209ENST00000545689 EEPD1Q7L9B9 569 aa13.31□□□□□ -0.28
COL4A6-209ENST00000545689 LPAR1Q92633 364 aa13.31□□□□□ -0.28
COL4A6-209ENST00000545689 CCDC124Q96CT7 223 aaKnown RBP13.31□□□□□ -0.28
COL4A6-209ENST00000545689 CENPKQ9BS16 269 aa13.31□□□□□ -0.28
COL4A6-209ENST00000545689 NDE1Q9NXR1 346 aa13.31□□□□□ -0.28
COL4A6-209ENST00000545689 KIF20BQ96Q89 1820 aa13.31□□□□□ -0.28
COL4A6-209ENST00000545689 M0QYV0 167 aa13.31□□□□□ -0.28
COL4A6-209ENST00000545689 PSMC1P62191 440 aaKnown RBP13.31□□□□□ -0.28
COL4A6-209ENST00000545689 NFIXQ14938 502 aa13.31□□□□□ -0.28
COL4A6-209ENST00000545689 FBXO33Q7Z6M2 555 aa13.31□□□□□ -0.28
COL4A6-209ENST00000545689 LDHDQ86WU2 507 aa13.31□□□□□ -0.28
COL4A6-209ENST00000545689 TGS1Q96RS0 853 aaKnown RBP13.31□□□□□ -0.28
COL4A6-209ENST00000545689 STOML1Q9UBI4 398 aa13.31□□□□□ -0.28
COL4A6-209ENST00000545689 XPAP23025 273 aaPredicted RBP13.31□□□□□ -0.28
COL4A6-209ENST00000545689 YWHABP31946 246 aaKnown RBP13.31□□□□□ -0.28
COL4A6-209ENST00000545689 PDIA6Q15084 440 aa13.31□□□□□ -0.28
COL4A6-209ENST00000545689 RSBN1LQ6PCB5 846 aaPredicted RBP13.31□□□□□ -0.28
COL4A6-209ENST00000545689 RPAINQ86UA6 219 aa13.31□□□□□ -0.28
COL4A6-209ENST00000545689 SUDS3Q9H7L9 328 aaPredicted RBP13.31□□□□□ -0.28
COL4A6-209ENST00000545689 DNAJC17Q9NVM6 304 aaKnown RBP13.31□□□□□ -0.28
COL4A6-209ENST00000545689 KLHL8Q9P2G9 620 aaPredicted RBP13.31□□□□□ -0.28
COL4A6-209ENST00000545689 SLC9A2Q9UBY0 812 aa13.31□□□□□ -0.28
COL4A6-209ENST00000545689 ZNF211Q13398 564 aaPredicted RBP13.31□□□□□ -0.28
COL4A6-209ENST00000545689 IZUMO3Q5VZ72 239 aa13.31□□□□□ -0.28
COL4A6-209ENST00000545689 TBC1D16Q8TBP0 767 aa13.31□□□□□ -0.28
COL4A6-209ENST00000545689 GIPC2Q8TF65 315 aa13.31□□□□□ -0.28
COL4A6-209ENST00000545689 MAGEB5Q9BZ81 275 aa13.31□□□□□ -0.28
COL4A6-209ENST00000545689 WDR35Q9P2L0 1181 aa13.31□□□□□ -0.28
COL4A6-209ENST00000545689 ADAMTS13Q76LX8 1427 aa13.31□□□□□ -0.28
COL4A6-209ENST00000545689 A0A0G2JND7 137 aa13.31□□□□□ -0.28
COL4A6-209ENST00000545689 TTC36A6NLP5 189 aa13.31□□□□□ -0.28
COL4A6-209ENST00000545689 RBM43Q6ZSC3 357 aaKnown RBP13.31□□□□□ -0.28
COL4A6-209ENST00000545689 PSD3Q9NYI0 1048 aa13.31□□□□□ -0.28
COL4A6-209ENST00000545689 HPS5Q9UPZ3 1129 aa13.31□□□□□ -0.28
COL4A6-209ENST00000545689 SMAPO00193 183 aa13.3□□□□□ -0.28
COL4A6-209ENST00000545689 GNGT2O14610 69 aa13.3□□□□□ -0.28
COL4A6-209ENST00000545689 KIAA1755Q5JYT7 1200 aa13.3□□□□□ -0.28
COL4A6-209ENST00000545689 PASD1Q8IV76 773 aa13.3□□□□□ -0.28
COL4A6-209ENST00000545689 NTSR2O95665 410 aa13.3□□□□□ -0.28
COL4A6-209ENST00000545689 FMO5P49326 533 aa13.3□□□□□ -0.28
COL4A6-209ENST00000545689 COPS2P61201 443 aa13.3□□□□□ -0.28
COL4A6-209ENST00000545689 HDLBPQ00341 1268 aaKnown RBP13.3□□□□□ -0.28
COL4A6-209ENST00000545689 GPS1Q13098 491 aa13.3□□□□□ -0.28
COL4A6-209ENST00000545689 NKX1-1Q15270 411 aaPredicted RBP13.3□□□□□ -0.28
COL4A6-209ENST00000545689 DUOXA2Q1HG44 320 aa13.3□□□□□ -0.28
COL4A6-209ENST00000545689 CCNI2Q6ZMN8 369 aaPredicted RBP13.3□□□□□ -0.28
COL4A6-209ENST00000545689 NDUFAF2Q8N183 169 aa13.3□□□□□ -0.28
COL4A6-209ENST00000545689 MMGT1Q8N4V1 131 aa13.3□□□□□ -0.28
COL4A6-209ENST00000545689 LRRC37BQ96QE4 947 aa13.3□□□□□ -0.28
COL4A6-209ENST00000545689 ERGIC2Q96RQ1 377 aa13.3□□□□□ -0.28
COL4A6-209ENST00000545689 PPARGC1AQ9UBK2 798 aaKnown RBP13.3□□□□□ -0.28
COL4A6-209ENST00000545689 TPX2Q9ULW0 747 aaKnown RBP13.3□□□□□ -0.28
COL4A6-209ENST00000545689 SMG5Q9UPR3 1016 aaKnown RBP13.3□□□□□ -0.28
COL4A6-209ENST00000545689 AP3B1O00203 1094 aa13.3□□□□□ -0.28
COL4A6-209ENST00000545689 DGAT1O75907 488 aa13.3□□□□□ -0.28
COL4A6-209ENST00000545689 MRPS25P82663 173 aaKnown RBP13.3□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 29.9 ms