RNA–Protein interactions for RNA: ENST00000544996.1

CCDC78-216, Transcript of coiled-coil domain containing 78, humanhuman

TSL 4

Gene CCDC78, Length 551 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC78-216ENST00000544996 STK38Q15208 465 aa17.33■□□□□ 0.36
CCDC78-216ENST00000544996 PDE12Q6L8Q7 609 aaKnown RBP17.33■□□□□ 0.36
CCDC78-216ENST00000544996 APBB1IPQ7Z5R6 666 aaPredicted RBP17.33■□□□□ 0.36
CCDC78-216ENST00000544996 CDR2LQ86X02 465 aaPredicted RBP17.33■□□□□ 0.36
CCDC78-216ENST00000544996 DAW1Q8N136 415 aa17.33■□□□□ 0.36
CCDC78-216ENST00000544996 APOL6Q9BWW8 343 aa17.33■□□□□ 0.36
CCDC78-216ENST00000544996 GIT1Q9Y2X7 761 aa17.33■□□□□ 0.36
CCDC78-216ENST00000544996 HES2Q9Y543 173 aa17.33■□□□□ 0.36
CCDC78-216ENST00000544996 MORC2Q9Y6X9 1032 aaPredicted RBP17.33■□□□□ 0.36
CCDC78-216ENST00000544996 FNDC1Q4ZHG4 1894 aaPredicted RBP17.33■□□□□ 0.36
CCDC78-216ENST00000544996 ARL5CA6NH57 179 aa17.32■□□□□ 0.36
CCDC78-216ENST00000544996 SFI1A8K8P3 1242 aa17.32■□□□□ 0.36
CCDC78-216ENST00000544996 POMCP01189 267 aa17.32■□□□□ 0.36
CCDC78-216ENST00000544996 KRT18P05783 430 aaKnown RBP17.32■□□□□ 0.36
CCDC78-216ENST00000544996 ZSCAN22P10073 491 aaPredicted RBP17.32■□□□□ 0.36
CCDC78-216ENST00000544996 PLS3P13797 630 aa17.32■□□□□ 0.36
CCDC78-216ENST00000544996 NASPP49321 788 aaPredicted RBP17.32■□□□□ 0.36
CCDC78-216ENST00000544996 MAPK7Q13164 816 aa17.32■□□□□ 0.36
CCDC78-216ENST00000544996 DHX8Q14562 1220 aaKnown RBP17.32■□□□□ 0.36
CCDC78-216ENST00000544996 BMS1Q14692 1282 aaKnown RBP17.32■□□□□ 0.36
CCDC78-216ENST00000544996 SPECC1Q5M775 1068 aa17.32■□□□□ 0.36
CCDC78-216ENST00000544996 FOXD4L5Q5VV16 416 aaPredicted RBP17.32■□□□□ 0.36
CCDC78-216ENST00000544996 EP400NLQ6ZTU2 488 aa17.32■□□□□ 0.36
CCDC78-216ENST00000544996 SLC39A11Q8N1S5 342 aa17.32■□□□□ 0.36
CCDC78-216ENST00000544996 KRI1Q8N9T8 703 aaKnown RBP17.32■□□□□ 0.36
CCDC78-216ENST00000544996 FOXD4L4Q8WXT5 416 aaPredicted RBP17.32■□□□□ 0.36
CCDC78-216ENST00000544996 PABPC5Q96DU9 382 aaKnown RBP17.32■□□□□ 0.36
CCDC78-216ENST00000544996 TMEM169Q96HH4 297 aa17.32■□□□□ 0.36
CCDC78-216ENST00000544996 EPSTI1Q96J88 318 aa17.32■□□□□ 0.36
CCDC78-216ENST00000544996 GAD1Q99259 594 aa17.32■□□□□ 0.36
CCDC78-216ENST00000544996 NTPCRQ9BSD7 190 aaKnown RBP17.32■□□□□ 0.36
CCDC78-216ENST00000544996 GBP3Q9H0R5 595 aa17.32■□□□□ 0.36
CCDC78-216ENST00000544996 RNF39Q9H2S5 420 aa17.32■□□□□ 0.36
CCDC78-216ENST00000544996 NXF3Q9H4D5 531 aaKnown RBP17.32■□□□□ 0.36
CCDC78-216ENST00000544996 PDZD7Q9H5P4 517 aa17.32■□□□□ 0.36
CCDC78-216ENST00000544996 TMEM134Q9H6X4 195 aa17.32■□□□□ 0.36
CCDC78-216ENST00000544996 NRDE2Q9H7Z3 1164 aa17.32■□□□□ 0.36
CCDC78-216ENST00000544996 UBE2ZQ9H832 354 aaPredicted RBP17.32■□□□□ 0.36
CCDC78-216ENST00000544996 LARSQ9P2J5 1176 aaKnown RBP17.32■□□□□ 0.36
CCDC78-216ENST00000544996 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP17.31■□□□□ 0.36
CCDC78-216ENST00000544996 DLL1O00548 723 aa17.31■□□□□ 0.36
CCDC78-216ENST00000544996 KCNA5P22460 613 aa17.31■□□□□ 0.36
CCDC78-216ENST00000544996 IRS1P35568 1242 aa17.31■□□□□ 0.36
CCDC78-216ENST00000544996 DDIT3P35638 169 aa17.31■□□□□ 0.36
CCDC78-216ENST00000544996 MLH1P40692 756 aa17.31■□□□□ 0.36
CCDC78-216ENST00000544996 ATF7IP2Q5U623 682 aa17.31■□□□□ 0.36
CCDC78-216ENST00000544996 GPBP1Q86WP2 473 aa17.31■□□□□ 0.36
CCDC78-216ENST00000544996 SPIRE2Q8WWL2 714 aa17.31■□□□□ 0.36
CCDC78-216ENST00000544996 LARP4BQ92615 738 aaKnown RBP17.31■□□□□ 0.36
CCDC78-216ENST00000544996 RAD54LQ92698 747 aa17.31■□□□□ 0.36
CCDC78-216ENST00000544996 CLIC6Q96NY7 704 aa17.31■□□□□ 0.36
CCDC78-216ENST00000544996 MRPL4Q9BYD3 311 aaKnown RBP17.31■□□□□ 0.36
CCDC78-216ENST00000544996 IGFLR1Q9H665 355 aa17.31■□□□□ 0.36
CCDC78-216ENST00000544996 NGRNQ9NPE2 291 aaKnown RBP17.31■□□□□ 0.36
CCDC78-216ENST00000544996 ENTPD7Q9NQZ7 604 aa17.31■□□□□ 0.36
CCDC78-216ENST00000544996 CLDND1Q9NY35 253 aa17.31■□□□□ 0.36
CCDC78-216ENST00000544996 ARHGAP28Q9P2N2 729 aa17.31■□□□□ 0.36
CCDC78-216ENST00000544996 PARP2Q9UGN5 583 aa17.31■□□□□ 0.36
CCDC78-216ENST00000544996 ODF2LQ9ULJ1 636 aa17.31■□□□□ 0.36
CCDC78-216ENST00000544996 PRUNE2Q8WUY3 3088 aa17.3■□□□□ 0.36
CCDC78-216ENST00000544996 TTLL13PA6NNM8 815 aa17.3■□□□□ 0.36
CCDC78-216ENST00000544996 NT5C1B-RDH14C9J2C7 533 aa17.3■□□□□ 0.36
CCDC78-216ENST00000544996 H0YCG3 227 aa17.3■□□□□ 0.36
CCDC78-216ENST00000544996 INPPL1O15357 1258 aa17.3■□□□□ 0.36
CCDC78-216ENST00000544996 SLC16A4O15374 487 aa17.3■□□□□ 0.36
CCDC78-216ENST00000544996 NR1I2O75469 434 aa17.3■□□□□ 0.36
CCDC78-216ENST00000544996 F13A1P00488 732 aa17.3■□□□□ 0.36
CCDC78-216ENST00000544996 ALDH2P05091 517 aa17.3■□□□□ 0.36
CCDC78-216ENST00000544996 GALTP07902 379 aa17.3■□□□□ 0.36
CCDC78-216ENST00000544996 AKAP5P24588 427 aa17.3■□□□□ 0.36
CCDC78-216ENST00000544996 AFF1P51825 1210 aaKnown RBP17.3■□□□□ 0.36
CCDC78-216ENST00000544996 ERVFC1P60507 584 aa17.3■□□□□ 0.36
CCDC78-216ENST00000544996 HYAL1Q12794 435 aa17.3■□□□□ 0.36
CCDC78-216ENST00000544996 STRN3Q13033 797 aa17.3■□□□□ 0.36
CCDC78-216ENST00000544996 DCAF4L1Q3SXM0 396 aa17.3■□□□□ 0.36
CCDC78-216ENST00000544996 ARSHQ5FYA8 562 aa17.3■□□□□ 0.36
CCDC78-216ENST00000544996 ZNF280BQ86YH2 543 aa17.3■□□□□ 0.36
CCDC78-216ENST00000544996 RPS6KC1Q96S38 1066 aa17.3■□□□□ 0.36
CCDC78-216ENST00000544996 TCF25Q9BQ70 676 aa17.3■□□□□ 0.36
CCDC78-216ENST00000544996 TMEM175Q9BSA9 504 aa17.3■□□□□ 0.36
CCDC78-216ENST00000544996 TLE6Q9H808 572 aa17.3■□□□□ 0.36
CCDC78-216ENST00000544996 BLOC1S4Q9NUP1 217 aa17.3■□□□□ 0.36
CCDC78-216ENST00000544996 TFIP11Q9UBB9 837 aaKnown RBP17.3■□□□□ 0.36
CCDC78-216ENST00000544996 STK17AQ9UEE5 414 aa17.3■□□□□ 0.36
CCDC78-216ENST00000544996 ZMYM2Q9UBW7 1377 aa17.29■□□□□ 0.36
CCDC78-216ENST00000544996 NPHP3-ACAD11A0A0J9YXS1 232 aa17.29■□□□□ 0.36
CCDC78-216ENST00000544996 FSD2A1L4K1 749 aa17.29■□□□□ 0.36
CCDC78-216ENST00000544996 SPTLC2O15270 562 aa17.29■□□□□ 0.36
CCDC78-216ENST00000544996 DDHD2O94830 711 aa17.29■□□□□ 0.36
CCDC78-216ENST00000544996 FAM13AO94988 1023 aa17.29■□□□□ 0.36
CCDC78-216ENST00000544996 MCM6Q14566 821 aa17.29■□□□□ 0.36
CCDC78-216ENST00000544996 COL19A1Q14993 1142 aa17.29■□□□□ 0.36
CCDC78-216ENST00000544996 NT5DC1Q5TFE4 455 aa17.29■□□□□ 0.36
CCDC78-216ENST00000544996 RRAGBQ5VZM2 374 aa17.29■□□□□ 0.36
CCDC78-216ENST00000544996 CCDC73Q6ZRK6 1079 aa17.29■□□□□ 0.36
CCDC78-216ENST00000544996 USP49Q70CQ1 688 aa17.29■□□□□ 0.36
CCDC78-216ENST00000544996 TMC7Q7Z402 723 aa17.29■□□□□ 0.36
CCDC78-216ENST00000544996 LINC00301Q8NCQ3 95 aa17.29■□□□□ 0.36
CCDC78-216ENST00000544996 IGSF21Q96ID5 467 aa17.29■□□□□ 0.36
CCDC78-216ENST00000544996 ZFP42Q96MM3 310 aa17.29■□□□□ 0.36
Retrieved 100 of 20,778 RNA–protein pairs in 26.9 ms