RNA–Protein interactions for RNA: ENST00000543123.1

RTN3-212, Transcript of reticulon 3, humanhuman

TSL 2

Gene RTN3, Length 712 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTN3-212ENST00000543123 ZNF280BQ86YH2 543 aa14.56□□□□□ -0.08
RTN3-212ENST00000543123 CCDC83Q8IWF9 413 aa14.56□□□□□ -0.08
RTN3-212ENST00000543123 ZBTB8OSQ8IWT0 167 aa14.56□□□□□ -0.08
RTN3-212ENST00000543123 SUGP1Q8IWZ8 645 aaKnown RBP14.56□□□□□ -0.08
RTN3-212ENST00000543123 FAM184AQ8NB25 1140 aa14.56□□□□□ -0.08
RTN3-212ENST00000543123 PIGOQ8TEQ8 1089 aa14.56□□□□□ -0.08
RTN3-212ENST00000543123 PRIMPOLQ96LW4 560 aa14.56□□□□□ -0.08
RTN3-212ENST00000543123 NACC1Q96RE7 527 aa14.56□□□□□ -0.08
RTN3-212ENST00000543123 APOL5Q9BWW9 433 aa14.56□□□□□ -0.08
RTN3-212ENST00000543123 POLR3FQ9H1D9 316 aaPredicted RBP14.56□□□□□ -0.08
RTN3-212ENST00000543123 TSHZ2Q9NRE2 1034 aa14.56□□□□□ -0.08
RTN3-212ENST00000543123 MRPL17Q9NRX2 175 aaKnown RBP14.56□□□□□ -0.08
RTN3-212ENST00000543123 DAXXQ9UER7 740 aaPredicted RBP14.56□□□□□ -0.08
RTN3-212ENST00000543123 DPP7Q9UHL4 492 aa14.56□□□□□ -0.08
RTN3-212ENST00000543123 DBR1Q9UK59 544 aaKnown RBP14.56□□□□□ -0.08
RTN3-212ENST00000543123 NOL7Q9UMY1 257 aaKnown RBP14.56□□□□□ -0.08
RTN3-212ENST00000543123 GIT1Q9Y2X7 761 aa14.56□□□□□ -0.08
RTN3-212ENST00000543123 WDFY4Q6ZS81 3184 aa14.56□□□□□ -0.08
RTN3-212ENST00000543123 TMEM221A6NGB7 291 aa14.55□□□□□ -0.08
RTN3-212ENST00000543123 ARL5CA6NH57 179 aa14.55□□□□□ -0.08
RTN3-212ENST00000543123 LRRIQ4A6NIV6 560 aa14.55□□□□□ -0.08
RTN3-212ENST00000543123 M0R296 226 aa14.55□□□□□ -0.08
RTN3-212ENST00000543123 INPPL1O15357 1258 aa14.55□□□□□ -0.08
RTN3-212ENST00000543123 URODP06132 367 aa14.55□□□□□ -0.08
RTN3-212ENST00000543123 OR52Z1P0C646 297 aa14.55□□□□□ -0.08
RTN3-212ENST00000543123 MUTP22033 750 aa14.55□□□□□ -0.08
RTN3-212ENST00000543123 GLRA2P23416 452 aa14.55□□□□□ -0.08
RTN3-212ENST00000543123 SIGLEC14Q08ET2 396 aa14.55□□□□□ -0.08
RTN3-212ENST00000543123 PTPN14Q15678 1187 aa14.55□□□□□ -0.08
RTN3-212ENST00000543123 PTPN21Q16825 1174 aa14.55□□□□□ -0.08
RTN3-212ENST00000543123 ATAT1Q5SQI0 421 aa14.55□□□□□ -0.08
RTN3-212ENST00000543123 KIAA1841Q6NSI8 718 aa14.55□□□□□ -0.08
RTN3-212ENST00000543123 SLC27A1Q6PCB7 646 aa14.55□□□□□ -0.08
RTN3-212ENST00000543123 SMG8Q8ND04 991 aaKnown RBP14.55□□□□□ -0.08
RTN3-212ENST00000543123 ASAP3Q8TDY4 903 aa14.55□□□□□ -0.08
RTN3-212ENST00000543123 BCL7CQ8WUZ0 217 aaPredicted RBP14.55□□□□□ -0.08
RTN3-212ENST00000543123 AUTS2Q8WXX7 1259 aa14.55□□□□□ -0.08
RTN3-212ENST00000543123 PRRX2Q99811 253 aa14.55□□□□□ -0.08
RTN3-212ENST00000543123 POLR3CQ9BUI4 534 aaPredicted RBP14.55□□□□□ -0.08
RTN3-212ENST00000543123 C2orf40Q9H1Z8 148 aa14.55□□□□□ -0.08
RTN3-212ENST00000543123 SFXN1Q9H9B4 322 aa14.55□□□□□ -0.08
RTN3-212ENST00000543123 PRMT7Q9NVM4 692 aaPredicted RBP14.55□□□□□ -0.08
RTN3-212ENST00000543123 KIF3AQ9Y496 699 aa14.55□□□□□ -0.08
RTN3-212ENST00000543123 STK24Q9Y6E0 443 aa14.55□□□□□ -0.08
RTN3-212ENST00000543123 PIEZO1Q92508 2521 aa14.55□□□□□ -0.08
RTN3-212ENST00000543123 WNT7AO00755 349 aa14.54□□□□□ -0.08
RTN3-212ENST00000543123 NRP1O14786 923 aa14.54□□□□□ -0.08
RTN3-212ENST00000543123 DDHD2O94830 711 aa14.54□□□□□ -0.08
RTN3-212ENST00000543123 SOD2P04179 222 aa14.54□□□□□ -0.08
RTN3-212ENST00000543123 ARF4P18085 180 aaPredicted RBP14.54□□□□□ -0.08
RTN3-212ENST00000543123 KLRC2P26717 231 aa14.54□□□□□ -0.08
RTN3-212ENST00000543123 RPA1P27694 616 aa14.54□□□□□ -0.08
RTN3-212ENST00000543123 MLH1P40692 756 aa14.54□□□□□ -0.08
RTN3-212ENST00000543123 OR1G1P47890 313 aa14.54□□□□□ -0.08
RTN3-212ENST00000543123 TTC38Q5R3I4 469 aa14.54□□□□□ -0.08
RTN3-212ENST00000543123 RARS2Q5T160 578 aaKnown RBP14.54□□□□□ -0.08
RTN3-212ENST00000543123 CATSPER3Q86XQ3 398 aa14.54□□□□□ -0.08
RTN3-212ENST00000543123 NOSTRINQ8IVI9 506 aa14.54□□□□□ -0.08
RTN3-212ENST00000543123 FBXO18Q8NFZ0 1043 aa14.54□□□□□ -0.08
RTN3-212ENST00000543123 PBXIP1Q96AQ6 731 aa14.54□□□□□ -0.08
RTN3-212ENST00000543123 CPB2Q96IY4 423 aa14.54□□□□□ -0.08
RTN3-212ENST00000543123 GAD1Q99259 594 aa14.54□□□□□ -0.08
RTN3-212ENST00000543123 EIF2AQ9BY44 585 aaKnown RBP14.54□□□□□ -0.08
RTN3-212ENST00000543123 RAB34Q9BZG1 259 aa14.54□□□□□ -0.08
RTN3-212ENST00000543123 TMEM60Q9H2L4 133 aa14.54□□□□□ -0.08
RTN3-212ENST00000543123 ARHGEF35A5YM69 484 aa14.53□□□□□ -0.08
RTN3-212ENST00000543123 B4GALT3O60512 393 aa14.53□□□□□ -0.08
RTN3-212ENST00000543123 SEC24BO95487 1268 aa14.53□□□□□ -0.08
RTN3-212ENST00000543123 ADH1AP07327 375 aa14.53□□□□□ -0.08
RTN3-212ENST00000543123 SPATA31C1P0DKV0 1188 aa14.53□□□□□ -0.08
RTN3-212ENST00000543123 EPCAMP16422 314 aa14.53□□□□□ -0.08
RTN3-212ENST00000543123 ST3GAL1Q11201 340 aa14.53□□□□□ -0.08
RTN3-212ENST00000543123 PPP2R5AQ15172 486 aa14.53□□□□□ -0.08
RTN3-212ENST00000543123 AMHR2Q16671 573 aa14.53□□□□□ -0.08
RTN3-212ENST00000543123 TMEM132AQ24JP5 1023 aa14.53□□□□□ -0.08
RTN3-212ENST00000543123 UBALD2Q8IYN6 164 aa14.53□□□□□ -0.08
RTN3-212ENST00000543123 TDRD5Q8NAT2 981 aaKnown RBP14.53□□□□□ -0.08
RTN3-212ENST00000543123 SLC22A17Q8WUG5 538 aa14.53□□□□□ -0.08
RTN3-212ENST00000543123 FBXL18Q96ME1 805 aa14.53□□□□□ -0.08
RTN3-212ENST00000543123 RPS6KC1Q96S38 1066 aa14.53□□□□□ -0.08
RTN3-212ENST00000543123 HERC2P3Q9BVR0 1158 aa14.53□□□□□ -0.08
RTN3-212ENST00000543123 COLEC11Q9BWP8 271 aa14.53□□□□□ -0.08
RTN3-212ENST00000543123 APOL6Q9BWW8 343 aa14.53□□□□□ -0.08
RTN3-212ENST00000543123 VN1R3Q9BXE9 311 aa14.53□□□□□ -0.08
RTN3-212ENST00000543123 NXF3Q9H4D5 531 aaKnown RBP14.53□□□□□ -0.08
RTN3-212ENST00000543123 POMKQ9H5K3 350 aa14.53□□□□□ -0.08
RTN3-212ENST00000543123 USTQ9Y2C2 406 aa14.53□□□□□ -0.08
RTN3-212ENST00000543123 PRG3Q9Y2Y8 225 aaPredicted RBP14.53□□□□□ -0.08
RTN3-212ENST00000543123 TECTAO75443 2155 aa14.53□□□□□ -0.08
RTN3-212ENST00000543123 A0A1B0GUA9 196 aa14.52□□□□□ -0.09
RTN3-212ENST00000543123 N4BP3O15049 544 aa14.52□□□□□ -0.09
RTN3-212ENST00000543123 NPTXRO95502 500 aa14.52□□□□□ -0.09
RTN3-212ENST00000543123 SSBP05455 408 aaKnown RBP eCLIP14.52□□□□□ -0.09
RTN3-212ENST00000543123 CNPP09543 421 aaKnown RBP14.52□□□□□ -0.09
RTN3-212ENST00000543123 SP100P23497 879 aaPredicted RBP14.52□□□□□ -0.09
RTN3-212ENST00000543123 GLUD2P49448 558 aa14.52□□□□□ -0.09
RTN3-212ENST00000543123 SCNN1GP51170 649 aa14.52□□□□□ -0.09
RTN3-212ENST00000543123 AFF1P51825 1210 aaKnown RBP14.52□□□□□ -0.09
RTN3-212ENST00000543123 CREMQ03060 361 aa14.52□□□□□ -0.09
RTN3-212ENST00000543123 DSC1Q08554 894 aa14.52□□□□□ -0.09
Retrieved 100 of 20,778 RNA–protein pairs in 23 ms