RNA–Protein interactions for RNA: ENST00000541576.5

THBS3-210, Transcript of thrombospondin 3, humanhuman

TSL 1 (best) BASIC

Gene THBS3, Length 3,200 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
THBS3-210ENST00000541576 KRT13P13646 458 aa9.46□□□□□ -0.9
THBS3-210ENST00000541576 FIGNQ5HY92 759 aa9.46□□□□□ -0.9
THBS3-210ENST00000541576 INTS8Q75QN2 995 aaKnown RBP9.46□□□□□ -0.9
THBS3-210ENST00000541576 NLRP4Q96MN2 994 aa9.46□□□□□ -0.9
THBS3-210ENST00000541576 C2orf40Q9H1Z8 148 aa9.46□□□□□ -0.9
THBS3-210ENST00000541576 FAM207AQ9NSI2 230 aaPredicted RBP9.46□□□□□ -0.9
THBS3-210ENST00000541576 LUC7L2Q9Y383 392 aaKnown RBP9.46□□□□□ -0.9
THBS3-210ENST00000541576 MAPK13O15264 365 aa9.45□□□□□ -0.9
THBS3-210ENST00000541576 STX10O60499 249 aa9.45□□□□□ -0.9
THBS3-210ENST00000541576 GJB1P08034 283 aa9.45□□□□□ -0.9
THBS3-210ENST00000541576 C6orf222P0C671 652 aaPredicted RBP9.45□□□□□ -0.9
THBS3-210ENST00000541576 GARTP22102 1010 aa9.45□□□□□ -0.9
THBS3-210ENST00000541576 APBA1Q02410 837 aa9.45□□□□□ -0.9
THBS3-210ENST00000541576 BFSP1Q12934 665 aa9.45□□□□□ -0.9
THBS3-210ENST00000541576 TRIM32Q13049 653 aa9.45□□□□□ -0.9
THBS3-210ENST00000541576 MFSD10Q14728 455 aa9.45□□□□□ -0.9
THBS3-210ENST00000541576 MTF1Q14872 753 aa9.45□□□□□ -0.9
THBS3-210ENST00000541576 LINC01465Q8N7H1 131 aa9.45□□□□□ -0.9
THBS3-210ENST00000541576 ABHD10Q9NUJ1 306 aa9.45□□□□□ -0.9
THBS3-210ENST00000541576 GOLGA8IPA6NC78 632 aa9.45□□□□□ -0.9
THBS3-210ENST00000541576 RRN3P2A6NIE6 340 aa9.45□□□□□ -0.9
THBS3-210ENST00000541576 GOLGA8JA6NMD2 632 aa9.45□□□□□ -0.9
THBS3-210ENST00000541576 SEPT4O43236 478 aa9.45□□□□□ -0.9
THBS3-210ENST00000541576 PIGRP01833 764 aa9.45□□□□□ -0.9
THBS3-210ENST00000541576 ELNP15502 786 aa9.45□□□□□ -0.9
THBS3-210ENST00000541576 CACNB2Q08289 660 aaPredicted RBP9.45□□□□□ -0.9
THBS3-210ENST00000541576 SNRNP35Q16560 246 aaKnown RBP9.45□□□□□ -0.9
THBS3-210ENST00000541576 SAAL1Q96ER3 474 aa9.45□□□□□ -0.9
THBS3-210ENST00000541576 SETD4Q9NVD3 440 aa9.45□□□□□ -0.9
THBS3-210ENST00000541576 AKT3Q9Y243 479 aa9.45□□□□□ -0.9
THBS3-210ENST00000541576 SIP14410 1827 aa9.45□□□□□ -0.9
THBS3-210ENST00000541576 NRCAMQ92823 1304 aa9.45□□□□□ -0.9
THBS3-210ENST00000541576 SOWAHDA6NJG2 315 aa9.44□□□□□ -0.9
THBS3-210ENST00000541576 NOL4O94818 638 aa9.44□□□□□ -0.9
THBS3-210ENST00000541576 SLU7O95391 586 aaKnown RBP9.44□□□□□ -0.9
THBS3-210ENST00000541576 SMIM10L2AP0DMW4 78 aa9.44□□□□□ -0.9
THBS3-210ENST00000541576 SMIM10L2BP0DMW5 78 aa9.44□□□□□ -0.9
THBS3-210ENST00000541576 PRKAR2AP13861 404 aaKnown RBP9.44□□□□□ -0.9
THBS3-210ENST00000541576 FECHP22830 423 aa9.44□□□□□ -0.9
THBS3-210ENST00000541576 PSEN2P49810 448 aa9.44□□□□□ -0.9
THBS3-210ENST00000541576 MAPK6Q16659 721 aa9.44□□□□□ -0.9
THBS3-210ENST00000541576 MARCH8Q5T0T0 291 aa9.44□□□□□ -0.9
THBS3-210ENST00000541576 SLFN12LQ6IEE8 588 aa9.44□□□□□ -0.9
THBS3-210ENST00000541576 RAD9BQ6WBX8 426 aa9.44□□□□□ -0.9
THBS3-210ENST00000541576 OR8K1Q8NGG5 319 aa9.44□□□□□ -0.9
THBS3-210ENST00000541576 LMBR1Q8WVP7 490 aa9.44□□□□□ -0.9
THBS3-210ENST00000541576 ZNF668Q96K58 619 aaPredicted RBP9.44□□□□□ -0.9
THBS3-210ENST00000541576 DNAJC7Q99615 494 aa9.44□□□□□ -0.9
THBS3-210ENST00000541576 TARS2Q9BW92 718 aaKnown RBP9.44□□□□□ -0.9
THBS3-210ENST00000541576 CCDC113Q9H0I3 377 aa9.44□□□□□ -0.9
THBS3-210ENST00000541576 SPC25Q9HBM1 224 aa9.44□□□□□ -0.9
THBS3-210ENST00000541576 ZNF446Q9NWS9 450 aa9.44□□□□□ -0.9
THBS3-210ENST00000541576 A0A1W2PQJ5 194 aa9.44□□□□□ -0.9
THBS3-210ENST00000541576 ARHGAP6O43182 974 aa9.44□□□□□ -0.9
THBS3-210ENST00000541576 URI1O94763 535 aaPredicted RBP9.44□□□□□ -0.9
THBS3-210ENST00000541576 PRKCBP05771 671 aa9.44□□□□□ -0.9
THBS3-210ENST00000541576 TRIM49P0CI25 452 aa9.44□□□□□ -0.9
THBS3-210ENST00000541576 TRIM49CP0CI26 452 aa9.44□□□□□ -0.9
THBS3-210ENST00000541576 RARBP10826 455 aa9.44□□□□□ -0.9
THBS3-210ENST00000541576 GJA9P57773 515 aa9.44□□□□□ -0.9
THBS3-210ENST00000541576 PTENP60484 403 aa9.44□□□□□ -0.9
THBS3-210ENST00000541576 ZBED6P86452 979 aa9.44□□□□□ -0.9
THBS3-210ENST00000541576 DPY19L2P1Q6NXN4 242 aa9.44□□□□□ -0.9
THBS3-210ENST00000541576 WDR59Q6PJI9 974 aa9.44□□□□□ -0.9
THBS3-210ENST00000541576 CBWD2Q8IUF1 395 aa9.44□□□□□ -0.9
THBS3-210ENST00000541576 GPD1LQ8N335 351 aa9.44□□□□□ -0.9
THBS3-210ENST00000541576 MNS1Q8NEH6 495 aa9.44□□□□□ -0.9
THBS3-210ENST00000541576 FBXL18Q96ME1 805 aa9.44□□□□□ -0.9
THBS3-210ENST00000541576 CHP1Q99653 195 aa9.44□□□□□ -0.9
THBS3-210ENST00000541576 KATNAL1Q9BW62 490 aa9.44□□□□□ -0.9
THBS3-210ENST00000541576 LSM14BQ9BX40 385 aaKnown RBP9.44□□□□□ -0.9
THBS3-210ENST00000541576 MRPL4Q9BYD3 311 aaKnown RBP9.44□□□□□ -0.9
THBS3-210ENST00000541576 DNAI1Q9UI46 699 aa9.44□□□□□ -0.9
THBS3-210ENST00000541576 STYXL1Q9Y6J8 313 aa9.44□□□□□ -0.9
THBS3-210ENST00000541576 INO80B-WBP1J3KQ70 363 aa9.44□□□□□ -0.9
THBS3-210ENST00000541576 HAS3O00219 553 aa9.44□□□□□ -0.9
THBS3-210ENST00000541576 KIAA0391O15091 583 aaKnown RBP9.44□□□□□ -0.9
THBS3-210ENST00000541576 MSCO60682 206 aa9.44□□□□□ -0.9
THBS3-210ENST00000541576 GNRH1P01148 92 aa9.44□□□□□ -0.9
THBS3-210ENST00000541576 EDN1P05305 212 aa9.44□□□□□ -0.9
THBS3-210ENST00000541576 ADRB2P07550 413 aa9.44□□□□□ -0.9
THBS3-210ENST00000541576 KCNJ6P48051 423 aa9.44□□□□□ -0.9
THBS3-210ENST00000541576 CLCN6P51797 869 aa9.44□□□□□ -0.9
THBS3-210ENST00000541576 VAMP7P51809 220 aa9.44□□□□□ -0.9
THBS3-210ENST00000541576 PURAQ00577 322 aaKnown RBP9.44□□□□□ -0.9
THBS3-210ENST00000541576 EXOC3L4Q17RC7 722 aa9.44□□□□□ -0.9
THBS3-210ENST00000541576 TSR1Q2NL82 804 aaKnown RBP9.44□□□□□ -0.9
THBS3-210ENST00000541576 GNASQ5JWF2 1037 aa9.44□□□□□ -0.9
THBS3-210ENST00000541576 NFRKBQ6P4R8 1299 aa9.44□□□□□ -0.9
THBS3-210ENST00000541576 ZPBP2Q6X784 338 aa9.44□□□□□ -0.9
THBS3-210ENST00000541576 GBP6Q6ZN66 633 aa9.44□□□□□ -0.9
THBS3-210ENST00000541576 TOGARAM2Q6ZUX3 1019 aa9.44□□□□□ -0.9
THBS3-210ENST00000541576 RAET1EQ8TD07 263 aa9.44□□□□□ -0.9
THBS3-210ENST00000541576 ERO1AQ96HE7 468 aa9.44□□□□□ -0.9
THBS3-210ENST00000541576 NAA15Q9BXJ9 866 aaKnown RBP9.44□□□□□ -0.9
THBS3-210ENST00000541576 INO80BQ9C086 356 aaPredicted RBP9.44□□□□□ -0.9
THBS3-210ENST00000541576 KCND1Q9NSA2 647 aa9.44□□□□□ -0.9
THBS3-210ENST00000541576 ANKFY1Q9P2R3 1169 aa9.44□□□□□ -0.9
THBS3-210ENST00000541576 GTPBP10A4D1E9 387 aaKnown RBP9.43□□□□□ -0.9
THBS3-210ENST00000541576 MYADML2A6NDP7 307 aa9.43□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 23 ms