RNA–Protein interactions for RNA: ENST00000541461.5

PHACTR3-209, Transcript of phosphatase and actin regulator 3, humanhuman

TSL 2 BASIC

Gene PHACTR3, Length 2,349 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHACTR3-209ENST00000541461 INTS2Q9H0H0 1204 aaKnown RBP11.36□□□□□ -0.59
PHACTR3-209ENST00000541461 GRHL1Q9NZI5 618 aa11.36□□□□□ -0.59
PHACTR3-209ENST00000541461 ZNF70Q9UC06 446 aaPredicted RBP11.36□□□□□ -0.59
PHACTR3-209ENST00000541461 CHORDC1Q9UHD1 332 aaPredicted RBP11.36□□□□□ -0.59
PHACTR3-209ENST00000541461 VAV3Q9UKW4 847 aa11.36□□□□□ -0.59
PHACTR3-209ENST00000541461 ODF2LQ9ULJ1 636 aa11.36□□□□□ -0.59
PHACTR3-209ENST00000541461 ALG6Q9Y672 507 aa11.36□□□□□ -0.59
PHACTR3-209ENST00000541461 GLTPD2A6NH11 291 aa11.36□□□□□ -0.59
PHACTR3-209ENST00000541461 CCDC169A6NNP5 214 aa11.36□□□□□ -0.59
PHACTR3-209ENST00000541461 TBX3O15119 743 aa11.36□□□□□ -0.59
PHACTR3-209ENST00000541461 MGRN1O60291 552 aa11.36□□□□□ -0.59
PHACTR3-209ENST00000541461 LRRN2O75325 713 aa11.36□□□□□ -0.59
PHACTR3-209ENST00000541461 FAM13AO94988 1023 aa11.36□□□□□ -0.59
PHACTR3-209ENST00000541461 EYA4O95677 639 aa11.36□□□□□ -0.59
PHACTR3-209ENST00000541461 HOXA13P31271 388 aaPredicted RBP11.36□□□□□ -0.59
PHACTR3-209ENST00000541461 ELF3P78545 371 aaPredicted RBP11.36□□□□□ -0.59
PHACTR3-209ENST00000541461 AP3B2Q13367 1082 aa11.36□□□□□ -0.59
PHACTR3-209ENST00000541461 DHX34Q14147 1143 aaKnown RBP11.36□□□□□ -0.59
PHACTR3-209ENST00000541461 SLFN13Q68D06 897 aa11.36□□□□□ -0.59
PHACTR3-209ENST00000541461 TTC27Q6P3X3 843 aa11.36□□□□□ -0.59
PHACTR3-209ENST00000541461 SH3BP5LQ7L8J4 393 aa11.36□□□□□ -0.59
PHACTR3-209ENST00000541461 SLC20A1Q8WUM9 679 aa11.36□□□□□ -0.59
PHACTR3-209ENST00000541461 P3H4Q92791 437 aa11.36□□□□□ -0.59
PHACTR3-209ENST00000541461 ELAC2Q9BQ52 826 aaKnown RBP11.36□□□□□ -0.59
PHACTR3-209ENST00000541461 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP11.36□□□□□ -0.59
PHACTR3-209ENST00000541461 SMCHD1A6NHR9 2005 aa11.35□□□□□ -0.59
PHACTR3-209ENST00000541461 ANKRD62A6NC57 917 aa11.35□□□□□ -0.59
PHACTR3-209ENST00000541461 FOXN3O00409 490 aaPredicted RBP11.35□□□□□ -0.59
PHACTR3-209ENST00000541461 FGFR4P22455 802 aa11.35□□□□□ -0.59
PHACTR3-209ENST00000541461 NF2P35240 595 aa11.35□□□□□ -0.59
PHACTR3-209ENST00000541461 IFNAR2P48551 515 aa11.35□□□□□ -0.59
PHACTR3-209ENST00000541461 MMP14P50281 582 aa11.35□□□□□ -0.59
PHACTR3-209ENST00000541461 PPP1R7Q15435 360 aa11.35□□□□□ -0.59
PHACTR3-209ENST00000541461 CCDC38Q502W7 563 aa11.35□□□□□ -0.59
PHACTR3-209ENST00000541461 PHLDB3Q6NSJ2 640 aa11.35□□□□□ -0.59
PHACTR3-209ENST00000541461 HIBCHQ6NVY1 386 aaPredicted RBP11.35□□□□□ -0.59
PHACTR3-209ENST00000541461 PIGWQ7Z7B1 504 aa11.35□□□□□ -0.59
PHACTR3-209ENST00000541461 CCDC50Q8IVM0 306 aa11.35□□□□□ -0.59
PHACTR3-209ENST00000541461 TPH2Q8IWU9 490 aa11.35□□□□□ -0.59
PHACTR3-209ENST00000541461 PRELID2Q8N945 189 aa11.35□□□□□ -0.59
PHACTR3-209ENST00000541461 RDH13Q8NBN7 331 aa11.35□□□□□ -0.59
PHACTR3-209ENST00000541461 MTMR14Q8NCE2 650 aa11.35□□□□□ -0.59
PHACTR3-209ENST00000541461 N4BP2L2Q92802 583 aaPredicted RBP11.35□□□□□ -0.59
PHACTR3-209ENST00000541461 OLFML3Q9NRN5 406 aa11.35□□□□□ -0.59
PHACTR3-209ENST00000541461 INTS9Q9NV88 658 aaKnown RBP11.35□□□□□ -0.59
PHACTR3-209ENST00000541461 DBR1Q9UK59 544 aaKnown RBP11.35□□□□□ -0.59
PHACTR3-209ENST00000541461 TRPC6Q9Y210 931 aa11.35□□□□□ -0.59
PHACTR3-209ENST00000541461 FRMPD4Q14CM0 1322 aa11.35□□□□□ -0.59
PHACTR3-209ENST00000541461 ASAP2O43150 1006 aa11.35□□□□□ -0.59
PHACTR3-209ENST00000541461 PPP1R12BO60237 982 aaPredicted RBP11.35□□□□□ -0.59
PHACTR3-209ENST00000541461 VIMP08670 466 aaKnown RBP11.35□□□□□ -0.59
PHACTR3-209ENST00000541461 ELF1P32519 619 aa11.35□□□□□ -0.59
PHACTR3-209ENST00000541461 PPP2R5EQ16537 467 aa11.35□□□□□ -0.59
PHACTR3-209ENST00000541461 FAM133BQ5BKY9 247 aaKnown RBP11.35□□□□□ -0.59
PHACTR3-209ENST00000541461 DLK2Q6UY11 383 aa11.35□□□□□ -0.59
PHACTR3-209ENST00000541461 RPAINQ86UA6 219 aa11.35□□□□□ -0.59
PHACTR3-209ENST00000541461 ANKS4BQ8N8V4 417 aa11.35□□□□□ -0.59
PHACTR3-209ENST00000541461 FAM20AQ96MK3 541 aa11.35□□□□□ -0.59
PHACTR3-209ENST00000541461 POLR3CQ9BUI4 534 aaPredicted RBP11.35□□□□□ -0.59
PHACTR3-209ENST00000541461 TMEM39BQ9GZU3 492 aa11.35□□□□□ -0.59
PHACTR3-209ENST00000541461 CCDC113Q9H0I3 377 aa11.35□□□□□ -0.59
PHACTR3-209ENST00000541461 DNAJC18Q9H819 358 aa11.35□□□□□ -0.59
PHACTR3-209ENST00000541461 CTTNBP2NLQ9P2B4 639 aa11.35□□□□□ -0.59
PHACTR3-209ENST00000541461 APEX2Q9UBZ4 518 aa11.35□□□□□ -0.59
PHACTR3-209ENST00000541461 RASAL2Q9UJF2 1139 aa11.35□□□□□ -0.59
PHACTR3-209ENST00000541461 TCRBV7S2A1N4TA0A589 114 aa11.34□□□□□ -0.59
PHACTR3-209ENST00000541461 ANKRD63C9JTQ0 380 aa11.34□□□□□ -0.59
PHACTR3-209ENST00000541461 CHMP2AO43633 222 aa11.34□□□□□ -0.59
PHACTR3-209ENST00000541461 PHF2O75151 1096 aa11.34□□□□□ -0.59
PHACTR3-209ENST00000541461 ATP6V1G2O95670 118 aa11.34□□□□□ -0.59
PHACTR3-209ENST00000541461 GAP43P17677 238 aa11.34□□□□□ -0.59
PHACTR3-209ENST00000541461 ZNF76P36508 570 aa11.34□□□□□ -0.59
PHACTR3-209ENST00000541461 SREBF1P36956 1147 aa11.34□□□□□ -0.59
PHACTR3-209ENST00000541461 HIRAP54198 1017 aaPredicted RBP11.34□□□□□ -0.59
PHACTR3-209ENST00000541461 DRG2P55039 364 aaKnown RBP11.34□□□□□ -0.59
PHACTR3-209ENST00000541461 SPDYE2Q495Y8 402 aa11.34□□□□□ -0.59
PHACTR3-209ENST00000541461 PRAMEF18Q5VWM3 479 aa11.34□□□□□ -0.59
PHACTR3-209ENST00000541461 C1orf186Q6ZWK4 172 aa11.34□□□□□ -0.59
PHACTR3-209ENST00000541461 MAGEC3Q8TD91 643 aa11.34□□□□□ -0.59
PHACTR3-209ENST00000541461 TBC1D31Q96DN5 1066 aa11.34□□□□□ -0.59
PHACTR3-209ENST00000541461 ZBED3Q96IU2 234 aaPredicted RBP11.34□□□□□ -0.59
PHACTR3-209ENST00000541461 AGPAT1Q99943 283 aa11.34□□□□□ -0.59
PHACTR3-209ENST00000541461 BAIAP2L1Q9UHR4 511 aa11.34□□□□□ -0.59
PHACTR3-209ENST00000541461 GREB1LQ9C091 1923 aaPredicted RBP11.34□□□□□ -0.59
PHACTR3-209ENST00000541461 POLR2AP24928 1970 aaKnown RBP11.34□□□□□ -0.59
PHACTR3-209ENST00000541461 EIF3DO15371 548 aaKnown RBP eCLIP11.34□□□□□ -0.59
PHACTR3-209ENST00000541461 FTLP02792 175 aaPredicted RBP11.34□□□□□ -0.59
PHACTR3-209ENST00000541461 HLA-DOAP06340 250 aa11.34□□□□□ -0.59
PHACTR3-209ENST00000541461 MYL7Q01449 175 aa11.34□□□□□ -0.59
PHACTR3-209ENST00000541461 MKRN4PQ13434 485 aaPredicted RBP11.34□□□□□ -0.59
PHACTR3-209ENST00000541461 C6orf118Q5T5N4 469 aa11.34□□□□□ -0.59
PHACTR3-209ENST00000541461 ZNF746Q6NUN9 644 aaPredicted RBP11.34□□□□□ -0.59
PHACTR3-209ENST00000541461 CCDC137Q6PK04 289 aaKnown RBP11.34□□□□□ -0.59
PHACTR3-209ENST00000541461 CPNE8Q86YQ8 564 aa11.34□□□□□ -0.59
PHACTR3-209ENST00000541461 TCP11Q8WWU5 503 aa11.34□□□□□ -0.59
PHACTR3-209ENST00000541461 HOOK2Q96ED9 719 aa11.34□□□□□ -0.59
PHACTR3-209ENST00000541461 DYDC2Q96IM9 177 aa11.34□□□□□ -0.59
PHACTR3-209ENST00000541461 AMNQ9BXJ7 453 aa11.34□□□□□ -0.59
PHACTR3-209ENST00000541461 IDI2Q9BXS1 227 aa11.34□□□□□ -0.59
PHACTR3-209ENST00000541461 NOD2Q9HC29 1040 aa11.34□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 19.4 ms