RNA–Protein interactions for RNA: ENST00000541342.2

SPIDR-227, Transcript of scaffold protein involved in DNA repair, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene SPIDR, Length 3,311 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPIDR-227ENST00000541342 GABBR1Q9UBS5 961 aa18.59■□□□□ 0.57
SPIDR-227ENST00000541342 STBD1O95210 358 aa18.58■□□□□ 0.57
SPIDR-227ENST00000541342 RPL13P26373 211 aaKnown RBP18.58■□□□□ 0.57
SPIDR-227ENST00000541342 GJA5P36382 358 aa18.58■□□□□ 0.57
SPIDR-227ENST00000541342 ALDH5A1P51649 535 aaPredicted RBP18.58■□□□□ 0.57
SPIDR-227ENST00000541342 SEC24CP53992 1094 aa18.58■□□□□ 0.57
SPIDR-227ENST00000541342 SP4Q02446 784 aa18.58■□□□□ 0.57
SPIDR-227ENST00000541342 GPR162Q16538 588 aa18.58■□□□□ 0.57
SPIDR-227ENST00000541342 NFIL3Q16649 462 aa18.58■□□□□ 0.57
SPIDR-227ENST00000541342 MMS22LQ6ZRQ5 1243 aa18.58■□□□□ 0.57
SPIDR-227ENST00000541342 DDX42Q86XP3 938 aaKnown RBP eCLIP18.58■□□□□ 0.57
SPIDR-227ENST00000541342 SUGP1Q8IWZ8 645 aaKnown RBP18.58■□□□□ 0.57
SPIDR-227ENST00000541342 PLCD3Q8N3E9 789 aa18.58■□□□□ 0.57
SPIDR-227ENST00000541342 PFASO15067 1338 aa18.58■□□□□ 0.57
SPIDR-227ENST00000541342 SLC16A3O15427 465 aaKnown RBP18.58■□□□□ 0.56
SPIDR-227ENST00000541342 FNTAP49354 379 aa18.58■□□□□ 0.56
SPIDR-227ENST00000541342 SLC9A2Q9UBY0 812 aa18.58■□□□□ 0.56
SPIDR-227ENST00000541342 NAGPAQ9UK23 515 aa18.58■□□□□ 0.56
SPIDR-227ENST00000541342 PCDHB13Q9Y5F0 798 aa18.58■□□□□ 0.56
SPIDR-227ENST00000541342 K7ENM7 598 aa18.57■□□□□ 0.56
SPIDR-227ENST00000541342 HSD17B3P37058 310 aa18.57■□□□□ 0.56
SPIDR-227ENST00000541342 RPS6KA1Q15418 735 aa18.57■□□□□ 0.56
SPIDR-227ENST00000541342 STXBP2Q15833 593 aa18.57■□□□□ 0.56
SPIDR-227ENST00000541342 GNPTABQ3T906 1256 aa18.57■□□□□ 0.56
SPIDR-227ENST00000541342 XKR9Q5GH70 373 aa18.57■□□□□ 0.56
SPIDR-227ENST00000541342 CDHR1Q96JP9 859 aa18.57■□□□□ 0.56
SPIDR-227ENST00000541342 PLCB1Q9NQ66 1216 aa18.57■□□□□ 0.56
SPIDR-227ENST00000541342 AGPAT3Q9NRZ7 376 aa18.57■□□□□ 0.56
SPIDR-227ENST00000541342 ANKEF1Q9NU02 776 aa18.57■□□□□ 0.56
SPIDR-227ENST00000541342 FBXO40Q9UH90 709 aa18.57■□□□□ 0.56
SPIDR-227ENST00000541342 SOWAHBA6NEL2 793 aa18.57■□□□□ 0.56
SPIDR-227ENST00000541342 POTEJP0CG39 1038 aa18.57■□□□□ 0.56
SPIDR-227ENST00000541342 PLS3P13797 630 aa18.57■□□□□ 0.56
SPIDR-227ENST00000541342 PON1P27169 355 aa18.57■□□□□ 0.56
SPIDR-227ENST00000541342 TNNC1P63316 161 aa18.57■□□□□ 0.56
SPIDR-227ENST00000541342 OR2W6PQ8NHA6 318 aa18.57■□□□□ 0.56
SPIDR-227ENST00000541342 AP1M1Q9BXS5 423 aa18.57■□□□□ 0.56
SPIDR-227ENST00000541342 TMBIM4Q9HC24 238 aa18.57■□□□□ 0.56
SPIDR-227ENST00000541342 MDH1P40925 334 aaKnown RBP18.57■□□□□ 0.56
SPIDR-227ENST00000541342 ACTR2P61160 394 aa18.57■□□□□ 0.56
SPIDR-227ENST00000541342 CEP85LQ5SZL2 805 aa18.57■□□□□ 0.56
SPIDR-227ENST00000541342 GPAT2Q6NUI2 795 aa18.57■□□□□ 0.56
SPIDR-227ENST00000541342 SWSAP1Q6NVH7 229 aa18.57■□□□□ 0.56
SPIDR-227ENST00000541342 CCDC60Q8IWA6 550 aaPredicted RBP18.57■□□□□ 0.56
SPIDR-227ENST00000541342 OLIG1Q8TAK6 271 aa18.57■□□□□ 0.56
SPIDR-227ENST00000541342 ACTRT1Q8TDG2 376 aa18.57■□□□□ 0.56
SPIDR-227ENST00000541342 LARSQ9P2J5 1176 aaKnown RBP18.57■□□□□ 0.56
SPIDR-227ENST00000541342 MYH9P35579 1960 aaKnown RBP18.56■□□□□ 0.56
SPIDR-227ENST00000541342 FLT3P36888 993 aa18.56■□□□□ 0.56
SPIDR-227ENST00000541342 ABHD15Q6UXT9 468 aa18.56■□□□□ 0.56
SPIDR-227ENST00000541342 STXBP4Q6ZWJ1 553 aa18.56■□□□□ 0.56
SPIDR-227ENST00000541342 ZNF473Q8WTR7 871 aaKnown RBP18.56■□□□□ 0.56
SPIDR-227ENST00000541342 SIX2Q9NPC8 291 aa18.56■□□□□ 0.56
SPIDR-227ENST00000541342 DMAC2Q9NW81 257 aa18.56■□□□□ 0.56
SPIDR-227ENST00000541342 RBPJLQ9UBG7 517 aa18.56■□□□□ 0.56
SPIDR-227ENST00000541342 HMGB1P1B2RPK0 211 aaPredicted RBP18.56■□□□□ 0.56
SPIDR-227ENST00000541342 XRCC5P13010 732 aaKnown RBP18.56■□□□□ 0.56
SPIDR-227ENST00000541342 Q3C1V9 767 aa18.56■□□□□ 0.56
SPIDR-227ENST00000541342 DCAF17Q5H9S7 520 aaPredicted RBP18.56■□□□□ 0.56
SPIDR-227ENST00000541342 METTL13Q8N6R0 699 aa18.56■□□□□ 0.56
SPIDR-227ENST00000541342 ZNF526Q8TF50 670 aaPredicted RBP18.56■□□□□ 0.56
SPIDR-227ENST00000541342 SLC35C1Q96A29 364 aa18.56■□□□□ 0.56
SPIDR-227ENST00000541342 AFPP02771 609 aaKnown RBP18.56■□□□□ 0.56
SPIDR-227ENST00000541342 ICAM3P32942 547 aa18.56■□□□□ 0.56
SPIDR-227ENST00000541342 LDLRAD1Q5T700 205 aa18.56■□□□□ 0.56
SPIDR-227ENST00000541342 B4GALNT4Q76KP1 1039 aa18.56■□□□□ 0.56
SPIDR-227ENST00000541342 TPCN2Q8NHX9 752 aa18.56■□□□□ 0.56
SPIDR-227ENST00000541342 MYCBPAPQ8TBZ2 947 aa18.56■□□□□ 0.56
SPIDR-227ENST00000541342 MEFVO15553 781 aaPredicted RBP18.55■□□□□ 0.56
SPIDR-227ENST00000541342 PSAPP07602 524 aa18.55■□□□□ 0.56
SPIDR-227ENST00000541342 MAPTP10636 758 aaKnown RBP18.55■□□□□ 0.56
SPIDR-227ENST00000541342 ITGA4P13612 1032 aa18.55■□□□□ 0.56
SPIDR-227ENST00000541342 EDNRBP24530 442 aa18.55■□□□□ 0.56
SPIDR-227ENST00000541342 HNRNPH1P31943 449 aaKnown RBP18.55■□□□□ 0.56
SPIDR-227ENST00000541342 GTF2A1P52655 376 aaPredicted RBP18.55■□□□□ 0.56
SPIDR-227ENST00000541342 SEPT14Q6ZU15 432 aa18.55■□□□□ 0.56
SPIDR-227ENST00000541342 CYFIP1Q7L576 1253 aa18.55■□□□□ 0.56
SPIDR-227ENST00000541342 ARMC9Q7Z3E5 817 aa18.55■□□□□ 0.56
SPIDR-227ENST00000541342 MAATS1Q7Z4T9 603 aa18.55■□□□□ 0.56
SPIDR-227ENST00000541342 EIF1ADQ8N9N8 165 aaKnown RBP18.55■□□□□ 0.56
SPIDR-227ENST00000541342 CCT8L2Q96SF2 557 aa18.55■□□□□ 0.56
SPIDR-227ENST00000541342 TISP43B9A030 160 aa18.55■□□□□ 0.56
SPIDR-227ENST00000541342 SART1O43290 800 aaKnown RBP18.55■□□□□ 0.56
SPIDR-227ENST00000541342 CEP104O60308 925 aa18.55■□□□□ 0.56
SPIDR-227ENST00000541342 CNPY4Q8N129 248 aa18.55■□□□□ 0.56
SPIDR-227ENST00000541342 DDX47Q9H0S4 455 aaKnown RBP18.55■□□□□ 0.56
SPIDR-227ENST00000541342 METTL14Q9HCE5 456 aaKnown RBP18.55■□□□□ 0.56
SPIDR-227ENST00000541342 NOC2LQ9Y3T9 749 aaKnown RBP18.55■□□□□ 0.56
SPIDR-227ENST00000541342 CYP2J2P51589 502 aa18.54■□□□□ 0.56
SPIDR-227ENST00000541342 JAM2P57087 298 aa18.54■□□□□ 0.56
SPIDR-227ENST00000541342 ZNF844Q08AG5 666 aa18.54■□□□□ 0.56
SPIDR-227ENST00000541342 FAM102BQ5T8I3 360 aa18.54■□□□□ 0.56
SPIDR-227ENST00000541342 ALKBH5Q6P6C2 394 aaKnown RBP18.54■□□□□ 0.56
SPIDR-227ENST00000541342 NLRP14Q86W24 1093 aa18.54■□□□□ 0.56
SPIDR-227ENST00000541342 FAM186BQ8IYM0 893 aa18.54■□□□□ 0.56
SPIDR-227ENST00000541342 TAF4BQ92750 862 aa18.54■□□□□ 0.56
SPIDR-227ENST00000541342 TIPINQ9BVW5 301 aa18.54■□□□□ 0.56
SPIDR-227ENST00000541342 LRRC4CQ9HCJ2 640 aa18.54■□□□□ 0.56
SPIDR-227ENST00000541342 STXBP5LQ9Y2K9 1186 aa18.54■□□□□ 0.56
SPIDR-227ENST00000541342 PSMC2P35998 433 aaKnown RBP18.54■□□□□ 0.56
Retrieved 100 of 20,778 RNA–protein pairs in 20 ms