RNA–Protein interactions for RNA: ENST00000541280.1

SUDS3-202, Transcript of SDS3 homolog, SIN3A corepressor complex component, humanhuman

TSL 5

Gene SUDS3, Length 659 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SUDS3-202ENST00000541280 C2orf69Q8N8R5 385 aa7.05□□□□□ -1.28
SUDS3-202ENST00000541280 TDRD7Q8NHU6 1098 aaKnown RBP7.05□□□□□ -1.28
SUDS3-202ENST00000541280 TBC1D22AQ8WUA7 517 aa7.05□□□□□ -1.28
SUDS3-202ENST00000541280 LPIN2Q92539 896 aa7.05□□□□□ -1.28
SUDS3-202ENST00000541280 GPR101Q96P66 508 aaPredicted RBP7.05□□□□□ -1.28
SUDS3-202ENST00000541280 SYT3Q9BQG1 590 aa7.05□□□□□ -1.28
SUDS3-202ENST00000541280 BDH2Q9BUT1 245 aa7.05□□□□□ -1.28
SUDS3-202ENST00000541280 MRIQ9BWK5 157 aa7.05□□□□□ -1.28
SUDS3-202ENST00000541280 CHMP4BQ9H444 224 aaKnown RBP7.05□□□□□ -1.28
SUDS3-202ENST00000541280 EPB41L1Q9H4G0 881 aa7.05□□□□□ -1.28
SUDS3-202ENST00000541280 GPR27Q9NS67 375 aa7.05□□□□□ -1.28
SUDS3-202ENST00000541280 HSPBP1Q9NZL4 362 aa7.05□□□□□ -1.28
SUDS3-202ENST00000541280 R3HCC1Q9Y3T6 440 aaKnown RBP7.05□□□□□ -1.28
SUDS3-202ENST00000541280 DUSP10Q9Y6W6 482 aa7.05□□□□□ -1.28
SUDS3-202ENST00000541280 CNTNAP1P78357 1384 aa7.05□□□□□ -1.28
SUDS3-202ENST00000541280 COL11A2P13942 1736 aaPredicted RBP7.04□□□□□ -1.28
SUDS3-202ENST00000541280 NUP98P52948 1817 aa7.04□□□□□ -1.28
SUDS3-202ENST00000541280 TCRBV5S2A0A599 114 aa7.04□□□□□ -1.28
SUDS3-202ENST00000541280 DLX3O60479 287 aa7.04□□□□□ -1.28
SUDS3-202ENST00000541280 FRAT2O75474 233 aaPredicted RBP7.04□□□□□ -1.28
SUDS3-202ENST00000541280 GNAI2P04899 355 aa7.04□□□□□ -1.28
SUDS3-202ENST00000541280 IL15P40933 162 aaPredicted RBP7.04□□□□□ -1.28
SUDS3-202ENST00000541280 PUM3Q15397 648 aaKnown RBP7.04□□□□□ -1.28
SUDS3-202ENST00000541280 DLGAP5Q15398 846 aa7.04□□□□□ -1.28
SUDS3-202ENST00000541280 SPATS1Q496A3 300 aa7.04□□□□□ -1.28
SUDS3-202ENST00000541280 UBXN11Q5T124 520 aa7.04□□□□□ -1.28
SUDS3-202ENST00000541280 CST9Q5W186 159 aa7.04□□□□□ -1.28
SUDS3-202ENST00000541280 STEAP3Q658P3 488 aa7.04□□□□□ -1.28
SUDS3-202ENST00000541280 PRRT2Q7Z6L0 340 aaPredicted RBP7.04□□□□□ -1.28
SUDS3-202ENST00000541280 ANKRD44Q8N8A2 993 aa7.04□□□□□ -1.28
SUDS3-202ENST00000541280 ST13P5Q8NFI4 369 aaPredicted RBP7.04□□□□□ -1.28
SUDS3-202ENST00000541280 PHOSPHO1Q8TCT1 267 aa7.04□□□□□ -1.28
SUDS3-202ENST00000541280 PPIL4Q8WUA2 492 aaKnown RBP eCLIP7.04□□□□□ -1.28
SUDS3-202ENST00000541280 FAM84BQ96KN1 310 aaPredicted RBP7.04□□□□□ -1.28
SUDS3-202ENST00000541280 GNL3LQ9NVN8 582 aaKnown RBP7.04□□□□□ -1.28
SUDS3-202ENST00000541280 DTLQ9NZJ0 730 aa7.04□□□□□ -1.28
SUDS3-202ENST00000541280 FER1L6Q2WGJ9 1857 aa7.04□□□□□ -1.28
SUDS3-202ENST00000541280 FAM205AQ6ZU69 1335 aa7.03□□□□□ -1.28
SUDS3-202ENST00000541280 TNRC6CQ9HCJ0 1690 aaKnown RBP7.03□□□□□ -1.28
SUDS3-202ENST00000541280 CA12O43570 354 aa7.03□□□□□ -1.28
SUDS3-202ENST00000541280 SLC5A1P13866 664 aa7.03□□□□□ -1.28
SUDS3-202ENST00000541280 TRIM27P14373 513 aa7.03□□□□□ -1.28
SUDS3-202ENST00000541280 NF2P35240 595 aa7.03□□□□□ -1.28
SUDS3-202ENST00000541280 PLP2Q04941 152 aa7.03□□□□□ -1.28
SUDS3-202ENST00000541280 ADAM9Q13443 819 aa7.03□□□□□ -1.28
SUDS3-202ENST00000541280 MTX1Q13505 466 aa7.03□□□□□ -1.28
SUDS3-202ENST00000541280 APOBEC3FQ8IUX4 373 aaKnown RBP7.03□□□□□ -1.28
SUDS3-202ENST00000541280 FTSJ3Q8IY81 847 aaKnown RBP7.03□□□□□ -1.28
SUDS3-202ENST00000541280 FRAT1Q92837 279 aaPredicted RBP7.03□□□□□ -1.28
SUDS3-202ENST00000541280 IER2Q9BTL4 223 aa7.03□□□□□ -1.28
SUDS3-202ENST00000541280 GLIS2Q9BZE0 524 aaPredicted RBP7.03□□□□□ -1.28
SUDS3-202ENST00000541280 CLDND1Q9NY35 253 aa7.03□□□□□ -1.28
SUDS3-202ENST00000541280 PCDHB4Q9Y5E5 795 aa7.03□□□□□ -1.28
SUDS3-202ENST00000541280 PPP2R3BQ9Y5P8 575 aa7.03□□□□□ -1.28
SUDS3-202ENST00000541280 WDR33Q9C0J8 1336 aaKnown RBP7.02□□□□□ -1.28
SUDS3-202ENST00000541280 TRAF5O00463 557 aa7.02□□□□□ -1.29
SUDS3-202ENST00000541280 WNT10BO00744 389 aa7.02□□□□□ -1.29
SUDS3-202ENST00000541280 IGSF3O75054 1194 aa7.02□□□□□ -1.29
SUDS3-202ENST00000541280 BCAR3O75815 825 aa7.02□□□□□ -1.29
SUDS3-202ENST00000541280 DGKIO75912 1065 aa7.02□□□□□ -1.29
SUDS3-202ENST00000541280 ADRB1P08588 477 aa7.02□□□□□ -1.29
SUDS3-202ENST00000541280 FGFR1P11362 822 aa7.02□□□□□ -1.29
SUDS3-202ENST00000541280 FGFR2P21802 821 aa7.02□□□□□ -1.29
SUDS3-202ENST00000541280 CNR2P34972 360 aa7.02□□□□□ -1.29
SUDS3-202ENST00000541280 STAT5AP42229 794 aa7.02□□□□□ -1.29
SUDS3-202ENST00000541280 RFX5P48382 616 aaPredicted RBP7.02□□□□□ -1.29
SUDS3-202ENST00000541280 NKX3-2P78367 333 aa7.02□□□□□ -1.29
SUDS3-202ENST00000541280 NOGQ13253 232 aa7.02□□□□□ -1.29
SUDS3-202ENST00000541280 RAB33AQ14088 237 aa7.02□□□□□ -1.29
SUDS3-202ENST00000541280 HSP90AA2PQ14568 343 aaPredicted RBP7.02□□□□□ -1.29
SUDS3-202ENST00000541280 SUPT20HL1Q3ZLR7 823 aa7.02□□□□□ -1.29
SUDS3-202ENST00000541280 LRRC24Q50LG9 513 aa7.02□□□□□ -1.29
SUDS3-202ENST00000541280 VGLL2Q8N8G2 317 aa7.02□□□□□ -1.29
SUDS3-202ENST00000541280 ARRDC4Q8NCT1 418 aa7.02□□□□□ -1.29
SUDS3-202ENST00000541280 WDR66Q8TBY9 1149 aa7.02□□□□□ -1.29
SUDS3-202ENST00000541280 ZNF669Q96BR6 464 aaPredicted RBP7.02□□□□□ -1.29
SUDS3-202ENST00000541280 TOE1Q96GM8 510 aaKnown RBP7.02□□□□□ -1.29
SUDS3-202ENST00000541280 CAPNS2Q96L46 248 aa7.02□□□□□ -1.29
SUDS3-202ENST00000541280 PUS3Q9BZE2 481 aaKnown RBP7.02□□□□□ -1.29
SUDS3-202ENST00000541280 SMOC1Q9H4F8 434 aa7.02□□□□□ -1.29
SUDS3-202ENST00000541280 GBA2Q9HCG7 927 aaPredicted RBP7.02□□□□□ -1.29
SUDS3-202ENST00000541280 ST7Q9NRC1 585 aa7.02□□□□□ -1.29
SUDS3-202ENST00000541280 GGA3Q9NZ52 723 aa7.02□□□□□ -1.29
SUDS3-202ENST00000541280 COL4A5P29400 1685 aa7.02□□□□□ -1.29
SUDS3-202ENST00000541280 MAST3O60307 1309 aa7.01□□□□□ -1.29
SUDS3-202ENST00000541280 ARFGEF2Q9Y6D5 1785 aa7.01□□□□□ -1.29
SUDS3-202ENST00000541280 SHTN1A0MZ66 631 aa7.01□□□□□ -1.29
SUDS3-202ENST00000541280 HSPA1AP0DMV8 641 aaKnown RBP7.01□□□□□ -1.29
SUDS3-202ENST00000541280 HSPA1BP0DMV9 641 aaKnown RBP7.01□□□□□ -1.29
SUDS3-202ENST00000541280 ZNF28P17035 718 aa7.01□□□□□ -1.29
SUDS3-202ENST00000541280 KLRK1P26718 216 aa7.01□□□□□ -1.29
SUDS3-202ENST00000541280 GYG1P46976 350 aa7.01□□□□□ -1.29
SUDS3-202ENST00000541280 CTCFP49711 727 aaPredicted RBP7.01□□□□□ -1.29
SUDS3-202ENST00000541280 HUNKP57058 714 aa7.01□□□□□ -1.29
SUDS3-202ENST00000541280 G3BP1Q13283 466 aaKnown RBP eCLIP7.01□□□□□ -1.29
SUDS3-202ENST00000541280 TNFAIP1Q13829 316 aa7.01□□□□□ -1.29
SUDS3-202ENST00000541280 MFSD14BQ5SR56 506 aa7.01□□□□□ -1.29
SUDS3-202ENST00000541280 RGMBQ6NW40 437 aa7.01□□□□□ -1.29
SUDS3-202ENST00000541280 DBX2Q6ZNG2 339 aa7.01□□□□□ -1.29
SUDS3-202ENST00000541280 ARMC9Q7Z3E5 817 aa7.01□□□□□ -1.29
Retrieved 100 of 20,778 RNA–protein pairs in 34.5 ms