RNA–Protein interactions for RNA: ENST00000540756.5

TTC3-225, Transcript of tetratricopeptide repeat domain 3, humanhuman

TSL 2 BASIC

Gene TTC3, Length 2,025 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TTC3-225ENST00000540756 ADGRG1Q9Y653 693 aa26.73■■□□□ 1.87
TTC3-225ENST00000540756 STYXL1Q9Y6J8 313 aa26.73■■□□□ 1.87
TTC3-225ENST00000540756 PIGRP01833 764 aa26.72■■□□□ 1.87
TTC3-225ENST00000540756 VTNP04004 478 aa26.72■■□□□ 1.87
TTC3-225ENST00000540756 IQCF3P0C7M6 154 aa26.72■■□□□ 1.87
TTC3-225ENST00000540756 TSR1Q2NL82 804 aaKnown RBP26.72■■□□□ 1.87
TTC3-225ENST00000540756 GPD1LQ8N335 351 aa26.72■■□□□ 1.87
TTC3-225ENST00000540756 IQCDQ96DY2 449 aa26.72■■□□□ 1.87
TTC3-225ENST00000540756 MAPK13O15264 365 aa26.72■■□□□ 1.87
TTC3-225ENST00000540756 UCHL3P15374 230 aa26.72■■□□□ 1.87
TTC3-225ENST00000540756 ABCD1P33897 745 aa26.72■■□□□ 1.87
TTC3-225ENST00000540756 ACOT2P49753 483 aa26.72■■□□□ 1.87
TTC3-225ENST00000540756 WNT7BP56706 349 aa26.72■■□□□ 1.87
TTC3-225ENST00000540756 NLRP11P59045 1033 aaKnown RBP26.72■■□□□ 1.87
TTC3-225ENST00000540756 SP3Q02447 781 aa26.72■■□□□ 1.87
TTC3-225ENST00000540756 KIAA0753Q2KHM9 967 aa26.72■■□□□ 1.87
TTC3-225ENST00000540756 SEZ6Q53EL9 994 aa26.72■■□□□ 1.87
TTC3-225ENST00000540756 TRIM65Q6PJ69 517 aa26.72■■□□□ 1.87
TTC3-225ENST00000540756 NYAP1Q6ZVC0 841 aa26.72■■□□□ 1.87
TTC3-225ENST00000540756 TOPORSQ9NS56 1045 aaPredicted RBP26.72■■□□□ 1.87
TTC3-225ENST00000540756 RNF186Q9NXI6 227 aa26.72■■□□□ 1.87
TTC3-225ENST00000540756 GTPBP10A4D1E9 387 aaKnown RBP26.71■■□□□ 1.87
TTC3-225ENST00000540756 MYADML2A6NDP7 307 aa26.71■■□□□ 1.87
TTC3-225ENST00000540756 F2P00734 622 aa26.71■■□□□ 1.87
TTC3-225ENST00000540756 MYL7Q01449 175 aa26.71■■□□□ 1.87
TTC3-225ENST00000540756 HIC1Q14526 733 aa26.71■■□□□ 1.87
TTC3-225ENST00000540756 PLCB1Q9NQ66 1216 aa26.71■■□□□ 1.87
TTC3-225ENST00000540756 HNRNPH3P31942 346 aaKnown RBP26.7■■□□□ 1.87
TTC3-225ENST00000540756 EFNA5P52803 228 aa26.7■■□□□ 1.87
TTC3-225ENST00000540756 PARD3BQ8TEW8 1205 aa26.7■■□□□ 1.87
TTC3-225ENST00000540756 MFSD14AQ96MC6 490 aa26.7■■□□□ 1.87
TTC3-225ENST00000540756 IFT122Q9HBG6 1241 aa26.7■■□□□ 1.87
TTC3-225ENST00000540756 ARHGAP20Q9P2F6 1191 aa26.7■■□□□ 1.87
TTC3-225ENST00000540756 AGO2Q9UKV8 859 aaKnown RBP26.7■■□□□ 1.87
TTC3-225ENST00000540756 AKT3Q9Y243 479 aa26.7■■□□□ 1.87
TTC3-225ENST00000540756 TRIP12Q14669 1992 aaPredicted RBP26.7■■□□□ 1.86
TTC3-225ENST00000540756 COL1A2P08123 1366 aa26.7■■□□□ 1.86
TTC3-225ENST00000540756 LRRIQ3A6PVS8 624 aaPredicted RBP26.7■■□□□ 1.86
TTC3-225ENST00000540756 MAGEB2O15479 319 aa26.7■■□□□ 1.86
TTC3-225ENST00000540756 B4GALT5O43286 388 aa26.7■■□□□ 1.86
TTC3-225ENST00000540756 PRKCBP05771 671 aa26.7■■□□□ 1.86
TTC3-225ENST00000540756 MYL3P08590 195 aa26.7■■□□□ 1.86
TTC3-225ENST00000540756 HARSP12081 509 aaKnown RBP26.7■■□□□ 1.86
TTC3-225ENST00000540756 CYBAP13498 195 aa26.7■■□□□ 1.86
TTC3-225ENST00000540756 YY1P25490 414 aa26.7■■□□□ 1.86
TTC3-225ENST00000540756 CYP24A1Q07973 514 aa26.7■■□□□ 1.86
TTC3-225ENST00000540756 CRELD2Q6UXH1 353 aaPredicted RBP26.7■■□□□ 1.86
TTC3-225ENST00000540756 LMBR1Q8WVP7 490 aa26.7■■□□□ 1.86
TTC3-225ENST00000540756 EDEM3Q9BZQ6 932 aa26.7■■□□□ 1.86
TTC3-225ENST00000540756 NHEJ1Q9H9Q4 299 aaPredicted RBP26.7■■□□□ 1.86
TTC3-225ENST00000540756 ZNHIT6Q9NWK9 470 aaKnown RBP26.7■■□□□ 1.86
TTC3-225ENST00000540756 A0A087WZ62 844 aa26.69■■□□□ 1.86
TTC3-225ENST00000540756 INO80B-WBP1J3KQ70 363 aa26.69■■□□□ 1.86
TTC3-225ENST00000540756 AKR1A1P14550 325 aa26.69■■□□□ 1.86
TTC3-225ENST00000540756 MATR3P43243 847 aaKnown RBP eCLIP26.69■■□□□ 1.867e-7■■■□□ 17
TTC3-225ENST00000540756 PTENP60484 403 aa26.69■■□□□ 1.86
TTC3-225ENST00000540756 ZBTB8OSQ8IWT0 167 aa26.69■■□□□ 1.86
TTC3-225ENST00000540756 LMO3Q8TAP4 145 aa26.69■■□□□ 1.86
TTC3-225ENST00000540756 FDXACB1Q9BRP7 624 aaPredicted RBP26.69■■□□□ 1.86
TTC3-225ENST00000540756 INO80BQ9C086 356 aaPredicted RBP26.69■■□□□ 1.86
TTC3-225ENST00000540756 TMEM117Q9H0C3 514 aa26.69■■□□□ 1.86
TTC3-225ENST00000540756 AP5M1Q9H0R1 490 aa26.69■■□□□ 1.86
TTC3-225ENST00000540756 REXO2Q9Y3B8 237 aaKnown RBP26.69■■□□□ 1.86
TTC3-225ENST00000540756 EPN1Q9Y6I3 576 aaPredicted RBP26.69■■□□□ 1.86
TTC3-225ENST00000540756 A0A0B4J269 797 aa26.68■■□□□ 1.86
TTC3-225ENST00000540756 EXTL3O43909 919 aa26.68■■□□□ 1.86
TTC3-225ENST00000540756 SMIM10L2AP0DMW4 78 aa26.68■■□□□ 1.86
TTC3-225ENST00000540756 SMIM10L2BP0DMW5 78 aa26.68■■□□□ 1.86
TTC3-225ENST00000540756 TNNT1P13805 278 aa26.68■■□□□ 1.86
TTC3-225ENST00000540756 ELNP15502 786 aa26.68■■□□□ 1.86
TTC3-225ENST00000540756 VEGFBP49765 207 aa26.68■■□□□ 1.86
TTC3-225ENST00000540756 MAPK6Q16659 721 aa26.68■■□□□ 1.86
TTC3-225ENST00000540756 ZBTB33Q86T24 672 aa26.68■■□□□ 1.86
TTC3-225ENST00000540756 CDR2LQ86X02 465 aaPredicted RBP26.68■■□□□ 1.86
TTC3-225ENST00000540756 MSTO1Q9BUK6 570 aa26.68■■□□□ 1.86
TTC3-225ENST00000540756 UTP3Q9NQZ2 479 aaKnown RBP eCLIP26.68■■□□□ 1.861e-6■■■■■ 51.5
TTC3-225ENST00000540756 NDUFA10O95299 355 aa26.68■■□□□ 1.86
TTC3-225ENST00000540756 DLATP10515 647 aaKnown RBP26.68■■□□□ 1.86
TTC3-225ENST00000540756 SCP2P22307 547 aa26.68■■□□□ 1.86
TTC3-225ENST00000540756 MBTD1Q05BQ5 628 aa26.68■■□□□ 1.86
TTC3-225ENST00000540756 TFDP1Q14186 410 aa26.68■■□□□ 1.86
TTC3-225ENST00000540756 PTPN14Q15678 1187 aa26.68■■□□□ 1.86
TTC3-225ENST00000540756 FSCN1Q16658 493 aaKnown RBP26.68■■□□□ 1.86
TTC3-225ENST00000540756 ACO2Q99798 780 aaKnown RBP26.68■■□□□ 1.86
TTC3-225ENST00000540756 MRPL4Q9BYD3 311 aaKnown RBP26.68■■□□□ 1.86
TTC3-225ENST00000540756 INTS2Q9H0H0 1204 aaKnown RBP26.68■■□□□ 1.86
TTC3-225ENST00000540756 ABL1P00519 1130 aa26.67■■□□□ 1.86
TTC3-225ENST00000540756 CPT1AP50416 773 aa26.67■■□□□ 1.86
TTC3-225ENST00000540756 MCCD1P59942 119 aaPredicted RBP26.67■■□□□ 1.86
TTC3-225ENST00000540756 ARID5AQ03989 594 aa26.67■■□□□ 1.86
TTC3-225ENST00000540756 RAPGEF1Q13905 1077 aa26.67■■□□□ 1.86
TTC3-225ENST00000540756 MFSD10Q14728 455 aa26.67■■□□□ 1.86
TTC3-225ENST00000540756 MFSD14CQ5VZR4 134 aa26.67■■□□□ 1.86
TTC3-225ENST00000540756 IQCEQ6IPM2 695 aa26.67■■□□□ 1.86
TTC3-225ENST00000540756 KIAA0319LQ8IZA0 1049 aa26.67■■□□□ 1.86
TTC3-225ENST00000540756 FZD8Q9H461 694 aa26.67■■□□□ 1.86
TTC3-225ENST00000540756 ZNF233A6NK53 670 aa26.66■■□□□ 1.86
TTC3-225ENST00000540756 ZSCAN12O43309 604 aa26.66■■□□□ 1.86
TTC3-225ENST00000540756 CCDC175P0C221 793 aa26.66■■□□□ 1.86
TTC3-225ENST00000540756 PNMA6AP0CW24 399 aaPredicted RBP26.66■■□□□ 1.86
Retrieved 100 of 20,778 RNA–protein pairs in 30.1 ms