RNA–Protein interactions for RNA: ENST00000539815.5

GNE-205, Transcript of glucosamine (UDP-N-acetyl)-2-epimerase/N-acetylmannosamine kinase, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene GNE, Length 3,657 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GNE-205ENST00000539815 LPPQ93052 612 aa8.39□□□□□ -1.07
GNE-205ENST00000539815 CALCOCO1Q9P1Z2 691 aa8.39□□□□□ -1.07
GNE-205ENST00000539815 MCM3APO60318 1980 aa8.38□□□□□ -1.07
GNE-205ENST00000539815 HIDE1A8MVS5 230 aa8.38□□□□□ -1.07
GNE-205ENST00000539815 B3GAT3O94766 335 aa8.38□□□□□ -1.07
GNE-205ENST00000539815 SP2Q02086 613 aa8.38□□□□□ -1.07
GNE-205ENST00000539815 BFSP1Q12934 665 aa8.38□□□□□ -1.07
GNE-205ENST00000539815 FAM26DQ5JW98 314 aa8.38□□□□□ -1.07
GNE-205ENST00000539815 CYP26C1Q6V0L0 522 aa8.38□□□□□ -1.07
GNE-205ENST00000539815 ZNF410Q86VK4 478 aa8.38□□□□□ -1.07
GNE-205ENST00000539815 C1orf210Q8IVY1 113 aa8.38□□□□□ -1.07
GNE-205ENST00000539815 IGSF21Q96ID5 467 aa8.38□□□□□ -1.07
GNE-205ENST00000539815 CYP4F11Q9HBI6 524 aa8.38□□□□□ -1.07
GNE-205ENST00000539815 COL4A3BPQ9Y5P4 624 aa8.38□□□□□ -1.07
GNE-205ENST00000539815 PLXNB2O15031 1838 aa8.38□□□□□ -1.07
GNE-205ENST00000539815 TBC1D4O60343 1298 aa8.38□□□□□ -1.07
GNE-205ENST00000539815 PLEKHA8P1O95397 391 aa8.38□□□□□ -1.07
GNE-205ENST00000539815 ARP10275 920 aa8.38□□□□□ -1.07
GNE-205ENST00000539815 SRFP11831 508 aa8.38□□□□□ -1.07
GNE-205ENST00000539815 GUCY2CP25092 1073 aa8.38□□□□□ -1.07
GNE-205ENST00000539815 SMARCA1P28370 1054 aa8.38□□□□□ -1.07
GNE-205ENST00000539815 LTBRP36941 435 aa8.38□□□□□ -1.07
GNE-205ENST00000539815 FOSBP53539 338 aa8.38□□□□□ -1.07
GNE-205ENST00000539815 PSMC5P62195 406 aa8.38□□□□□ -1.07
GNE-205ENST00000539815 MRPS9P82933 396 aaKnown RBP8.38□□□□□ -1.07
GNE-205ENST00000539815 MTA1Q13330 715 aa8.38□□□□□ -1.07
GNE-205ENST00000539815 SNW1Q13573 536 aaKnown RBP8.38□□□□□ -1.07
GNE-205ENST00000539815 RSPO4Q2I0M5 234 aaPredicted RBP8.38□□□□□ -1.07
GNE-205ENST00000539815 KRT25Q7Z3Z0 450 aa8.38□□□□□ -1.07
GNE-205ENST00000539815 ITFG2Q969R8 447 aa8.38□□□□□ -1.07
GNE-205ENST00000539815 TCEANC2Q96MN5 208 aa8.38□□□□□ -1.07
GNE-205ENST00000539815 ERVK-5Q9HDB9 667 aa8.38□□□□□ -1.07
GNE-205ENST00000539815 PCDHB2Q9Y5E7 798 aa8.38□□□□□ -1.07
GNE-205ENST00000539815 ZFP37Q9Y6Q3 630 aaPredicted RBP8.38□□□□□ -1.07
GNE-205ENST00000539815 TET1Q8NFU7 2136 aa8.38□□□□□ -1.07
GNE-205ENST00000539815 A0A0U1RQF3 1178 aa8.38□□□□□ -1.07
GNE-205ENST00000539815 DARSP14868 501 aaKnown RBP8.38□□□□□ -1.07
GNE-205ENST00000539815 MAGEA9P43362 315 aa8.38□□□□□ -1.07
GNE-205ENST00000539815 CXCL12P48061 93 aa8.38□□□□□ -1.07
GNE-205ENST00000539815 TRIM71Q2Q1W2 868 aaKnown RBP8.38□□□□□ -1.07
GNE-205ENST00000539815 PABPC1LQ4VXU2 614 aaKnown RBP8.38□□□□□ -1.07
GNE-205ENST00000539815 CCDC157Q569K6 752 aa8.38□□□□□ -1.07
GNE-205ENST00000539815 ANKS1AQ92625 1134 aa8.38□□□□□ -1.07
GNE-205ENST00000539815 CDK5RAP2Q96SN8 1893 aa8.38□□□□□ -1.07
GNE-205ENST00000539815 GAD1Q99259 594 aa8.38□□□□□ -1.07
GNE-205ENST00000539815 TRMT61BQ9BVS5 477 aaKnown RBP8.38□□□□□ -1.07
GNE-205ENST00000539815 MAD2L2Q9UI95 211 aa8.38□□□□□ -1.07
GNE-205ENST00000539815 FAM208BQ5VWN6 2430 aa8.37□□□□□ -1.07
GNE-205ENST00000539815 TRIP12Q14669 1992 aaPredicted RBP8.37□□□□□ -1.07
GNE-205ENST00000539815 TECTAO75443 2155 aa8.37□□□□□ -1.07
GNE-205ENST00000539815 ZMYM6O95789 1325 aa8.37□□□□□ -1.07
GNE-205ENST00000539815 CLASP2O75122 1294 aaKnown RBP8.37□□□□□ -1.07
GNE-205ENST00000539815 C8AP07357 584 aa8.37□□□□□ -1.07
GNE-205ENST00000539815 ALDH1A3P47895 512 aa8.37□□□□□ -1.07
GNE-205ENST00000539815 NR1H3Q13133 447 aa8.37□□□□□ -1.07
GNE-205ENST00000539815 STK3Q13188 491 aa8.37□□□□□ -1.07
GNE-205ENST00000539815 CTC1Q2NKJ3 1217 aa8.37□□□□□ -1.07
GNE-205ENST00000539815 KIAA0319LQ8IZA0 1049 aa8.37□□□□□ -1.07
GNE-205ENST00000539815 ZDHHC14Q8IZN3 488 aa8.37□□□□□ -1.07
GNE-205ENST00000539815 KCTD17Q8N5Z5 321 aa8.37□□□□□ -1.07
GNE-205ENST00000539815 C11orf16Q9NQ32 467 aa8.37□□□□□ -1.07
GNE-205ENST00000539815 CNTNAP2Q9UHC6 1331 aa8.37□□□□□ -1.07
GNE-205ENST00000539815 C19orf67A6NJJ6 358 aa8.37□□□□□ -1.07
GNE-205ENST00000539815 C9IYK1 514 aa8.37□□□□□ -1.07
GNE-205ENST00000539815 IGHA2P01877 340 aa8.37□□□□□ -1.07
GNE-205ENST00000539815 SCP2P22307 547 aa8.37□□□□□ -1.07
GNE-205ENST00000539815 QARSP47897 775 aaKnown RBP8.37□□□□□ -1.07
GNE-205ENST00000539815 RAD51AP2Q09MP3 1159 aa8.37□□□□□ -1.07
GNE-205ENST00000539815 MXD4Q14582 209 aaPredicted RBP8.37□□□□□ -1.07
GNE-205ENST00000539815 PSMD5Q16401 504 aa8.37□□□□□ -1.07
GNE-205ENST00000539815 MAPK6Q16659 721 aa8.37□□□□□ -1.07
GNE-205ENST00000539815 DHX32Q7L7V1 743 aaKnown RBP8.37□□□□□ -1.07
GNE-205ENST00000539815 FAM228AQ86W67 206 aa8.37□□□□□ -1.07
GNE-205ENST00000539815 SLC39A11Q8N1S5 342 aa8.37□□□□□ -1.07
GNE-205ENST00000539815 VN1R2Q8NFZ6 395 aa8.37□□□□□ -1.07
GNE-205ENST00000539815 ZBTB10Q96DT7 871 aa8.37□□□□□ -1.07
GNE-205ENST00000539815 CCDC97Q96F63 343 aaPredicted RBP8.37□□□□□ -1.07
GNE-205ENST00000539815 CORO1BQ9BR76 489 aa8.37□□□□□ -1.07
GNE-205ENST00000539815 SLC32A1Q9H598 525 aa8.37□□□□□ -1.07
GNE-205ENST00000539815 CXorf56Q9H5V9 222 aa8.37□□□□□ -1.07
GNE-205ENST00000539815 RIC8AQ9NPQ8 531 aa8.37□□□□□ -1.07
GNE-205ENST00000539815 NOL7Q9UMY1 257 aaKnown RBP8.37□□□□□ -1.07
GNE-205ENST00000539815 GOLGA4Q13439 2230 aaKnown RBP8.37□□□□□ -1.07
GNE-205ENST00000539815 H7C4K7 107 aa8.36□□□□□ -1.07
GNE-205ENST00000539815 TRAK2O60296 914 aa8.36□□□□□ -1.07
GNE-205ENST00000539815 STRN3Q13033 797 aa8.36□□□□□ -1.07
GNE-205ENST00000539815 DSTYKQ6XUX3 929 aa8.36□□□□□ -1.07
GNE-205ENST00000539815 SRGAP1Q7Z6B7 1085 aa8.36□□□□□ -1.07
GNE-205ENST00000539815 GPR149Q86SP6 731 aa8.36□□□□□ -1.07
GNE-205ENST00000539815 SPOCK2Q92563 424 aa8.36□□□□□ -1.07
GNE-205ENST00000539815 BRF1Q92994 677 aa8.36□□□□□ -1.07
GNE-205ENST00000539815 UPF2Q9HAU5 1272 aaKnown RBP8.36□□□□□ -1.07
GNE-205ENST00000539815 AGO4Q9HCK5 861 aaKnown RBP8.36□□□□□ -1.07
GNE-205ENST00000539815 SH2B1Q9NRF2 756 aaPredicted RBP8.36□□□□□ -1.07
GNE-205ENST00000539815 TBC1D13Q9NVG8 400 aa8.36□□□□□ -1.07
GNE-205ENST00000539815 UBIAD1Q9Y5Z9 338 aa8.36□□□□□ -1.07
GNE-205ENST00000539815 NFASCO94856 1347 aa8.36□□□□□ -1.07
GNE-205ENST00000539815 LOC730098B7Z3J9 87 aa8.36□□□□□ -1.07
GNE-205ENST00000539815 CCL16O15467 120 aa8.36□□□□□ -1.07
GNE-205ENST00000539815 BECN1Q14457 450 aa8.36□□□□□ -1.07
Retrieved 100 of 20,778 RNA–protein pairs in 31.5 ms