RNA–Protein interactions for RNA: ENST00000539584.5

UBE3B-209, Transcript of ubiquitin protein ligase E3B, humanhuman

TSL 5

Gene UBE3B, Length 2,006 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE3B-209ENST00000539584 SEMA4AQ9H3S1 761 aa14.25□□□□□ -0.13
UBE3B-209ENST00000539584 ATP6V0A4Q9HBG4 840 aa14.25□□□□□ -0.13
UBE3B-209ENST00000539584 UBE2TQ9NPD8 197 aaPredicted RBP14.25□□□□□ -0.13
UBE3B-209ENST00000539584 TAS2R14Q9NYV8 317 aa14.25□□□□□ -0.13
UBE3B-209ENST00000539584 TMOD4Q9NZQ9 345 aa14.25□□□□□ -0.13
UBE3B-209ENST00000539584 TPX2Q9ULW0 747 aaKnown RBP14.25□□□□□ -0.13
UBE3B-209ENST00000539584 TLDC2A0PJX2 215 aa14.25□□□□□ -0.13
UBE3B-209ENST00000539584 ARHGEF35A5YM69 484 aa14.25□□□□□ -0.13
UBE3B-209ENST00000539584 G3V3G9 751 aa14.25□□□□□ -0.13
UBE3B-209ENST00000539584 ECEL1O95672 775 aa14.25□□□□□ -0.13
UBE3B-209ENST00000539584 POLR2MP0CAP2 368 aa14.25□□□□□ -0.13
UBE3B-209ENST00000539584 TRIM49P0CI25 452 aa14.25□□□□□ -0.13
UBE3B-209ENST00000539584 TRIM49CP0CI26 452 aa14.25□□□□□ -0.13
UBE3B-209ENST00000539584 ITIH2P19823 946 aa14.25□□□□□ -0.13
UBE3B-209ENST00000539584 COMTP21964 271 aa14.25□□□□□ -0.13
UBE3B-209ENST00000539584 SCNN1DP51172 638 aa14.25□□□□□ -0.13
UBE3B-209ENST00000539584 RWDD2BP57060 319 aa14.25□□□□□ -0.13
UBE3B-209ENST00000539584 ZNF568Q3ZCX4 644 aa14.25□□□□□ -0.13
UBE3B-209ENST00000539584 CEP55Q53EZ4 464 aa14.25□□□□□ -0.13
UBE3B-209ENST00000539584 DCAF8Q5TAQ9 597 aa14.25□□□□□ -0.13
UBE3B-209ENST00000539584 B3GNT9Q6UX72 402 aa14.25□□□□□ -0.13
UBE3B-209ENST00000539584 CCDC63Q8NA47 563 aa14.25□□□□□ -0.13
UBE3B-209ENST00000539584 CYP2W1Q8TAV3 490 aa14.25□□□□□ -0.13
UBE3B-209ENST00000539584 RIT2Q99578 217 aa14.25□□□□□ -0.13
UBE3B-209ENST00000539584 ST6GALNAC4Q9H4F1 302 aa14.25□□□□□ -0.13
UBE3B-209ENST00000539584 GTF3C4Q9UKN8 822 aa14.25□□□□□ -0.13
UBE3B-209ENST00000539584 LOXHD1Q8IVV2 1947 aa14.25□□□□□ -0.13
UBE3B-209ENST00000539584 AFF2P51816 1311 aa14.24□□□□□ -0.13
UBE3B-209ENST00000539584 COL2A1P02458 1487 aaPredicted RBP14.24□□□□□ -0.13
UBE3B-209ENST00000539584 O00370 1275 aa14.24□□□□□ -0.13
UBE3B-209ENST00000539584 TCEA3O75764 348 aa14.24□□□□□ -0.13
UBE3B-209ENST00000539584 CYP1A2P05177 515 aa14.24□□□□□ -0.13
UBE3B-209ENST00000539584 ALDH1B1P30837 517 aa14.24□□□□□ -0.13
UBE3B-209ENST00000539584 ELF3P78545 371 aaPredicted RBP14.24□□□□□ -0.13
UBE3B-209ENST00000539584 AUHQ13825 339 aaKnown RBP14.24□□□□□ -0.13
UBE3B-209ENST00000539584 COG2Q14746 738 aa14.24□□□□□ -0.13
UBE3B-209ENST00000539584 CNGA2Q16280 664 aa14.24□□□□□ -0.13
UBE3B-209ENST00000539584 FAM71AQ8IYT1 594 aa14.24□□□□□ -0.13
UBE3B-209ENST00000539584 RPUSD2Q8IZ73 545 aaKnown RBP14.24□□□□□ -0.13
UBE3B-209ENST00000539584 FAM81BQ96LP2 452 aa14.24□□□□□ -0.13
UBE3B-209ENST00000539584 ACCSQ96QU6 501 aa14.24□□□□□ -0.13
UBE3B-209ENST00000539584 WDR18Q9BV38 432 aa14.24□□□□□ -0.13
UBE3B-209ENST00000539584 TEKT3Q9BXF9 490 aa14.24□□□□□ -0.13
UBE3B-209ENST00000539584 PRR12Q9ULL5 1215 aa14.24□□□□□ -0.13
UBE3B-209ENST00000539584 ATRNL1Q5VV63 1379 aa14.24□□□□□ -0.13
UBE3B-209ENST00000539584 EMSYQ7Z589 1322 aa14.24□□□□□ -0.13
UBE3B-209ENST00000539584 SNX3O60493 162 aa14.24□□□□□ -0.13
UBE3B-209ENST00000539584 LRRN2O75325 713 aa14.24□□□□□ -0.13
UBE3B-209ENST00000539584 POTEJP0CG39 1038 aa14.24□□□□□ -0.13
UBE3B-209ENST00000539584 HOXA13P31271 388 aaPredicted RBP14.24□□□□□ -0.13
UBE3B-209ENST00000539584 STAT2P52630 851 aa14.24□□□□□ -0.13
UBE3B-209ENST00000539584 SPRED3Q2MJR0 410 aa14.24□□□□□ -0.13
UBE3B-209ENST00000539584 RBM26Q5T8P6 1007 aaKnown RBP14.24□□□□□ -0.13
UBE3B-209ENST00000539584 CEP128Q6ZU80 1094 aa14.24□□□□□ -0.13
UBE3B-209ENST00000539584 ADAT2Q7Z6V5 191 aaKnown RBP14.24□□□□□ -0.13
UBE3B-209ENST00000539584 LRRC34Q8IZ02 419 aa14.24□□□□□ -0.13
UBE3B-209ENST00000539584 GPATCH11Q8N954 259 aa14.24□□□□□ -0.13
UBE3B-209ENST00000539584 GRK7Q8WTQ7 553 aa14.24□□□□□ -0.13
UBE3B-209ENST00000539584 HOOK2Q96ED9 719 aa14.24□□□□□ -0.13
UBE3B-209ENST00000539584 NGLY1Q96IV0 654 aa14.24□□□□□ -0.13
UBE3B-209ENST00000539584 PRMT1Q99873 361 aaKnown RBP14.24□□□□□ -0.13
UBE3B-209ENST00000539584 MOV10L1Q9BXT6 1211 aaKnown RBP14.24□□□□□ -0.13
UBE3B-209ENST00000539584 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP14.24□□□□□ -0.13
UBE3B-209ENST00000539584 MRPL11Q9Y3B7 192 aaKnown RBP14.24□□□□□ -0.13
UBE3B-209ENST00000539584 THSD7AQ9UPZ6 1657 aa14.23□□□□□ -0.13
UBE3B-209ENST00000539584 DDTLA6NHG4 134 aaPredicted RBP14.23□□□□□ -0.13
UBE3B-209ENST00000539584 POLRMTO00411 1230 aaKnown RBP14.23□□□□□ -0.13
UBE3B-209ENST00000539584 ENTPD3O75355 529 aa14.23□□□□□ -0.13
UBE3B-209ENST00000539584 SUN1O94901 812 aa14.23□□□□□ -0.13
UBE3B-209ENST00000539584 VIMP08670 466 aaKnown RBP14.23□□□□□ -0.13
UBE3B-209ENST00000539584 VIL1P09327 827 aaKnown RBP14.23□□□□□ -0.13
UBE3B-209ENST00000539584 ELF1P32519 619 aa14.23□□□□□ -0.13
UBE3B-209ENST00000539584 MFAP3P55082 362 aa14.23□□□□□ -0.13
UBE3B-209ENST00000539584 IFI35P80217 286 aaPredicted RBP14.23□□□□□ -0.13
UBE3B-209ENST00000539584 ENPEPQ07075 957 aa14.23□□□□□ -0.13
UBE3B-209ENST00000539584 ZNF268Q14587 947 aaPredicted RBP14.23□□□□□ -0.13
UBE3B-209ENST00000539584 PPP1R7Q15435 360 aa14.23□□□□□ -0.13
UBE3B-209ENST00000539584 TTC27Q6P3X3 843 aa14.23□□□□□ -0.13
UBE3B-209ENST00000539584 MIGA2Q7L4E1 593 aa14.23□□□□□ -0.13
UBE3B-209ENST00000539584 PALB2Q86YC2 1186 aa14.23□□□□□ -0.13
UBE3B-209ENST00000539584 ZFPM1Q8IX07 1006 aa14.23□□□□□ -0.13
UBE3B-209ENST00000539584 XXYLT1Q8NBI6 393 aa14.23□□□□□ -0.13
UBE3B-209ENST00000539584 KRT35Q92764 455 aa14.23□□□□□ -0.13
UBE3B-209ENST00000539584 ZNF577Q9BSK1 485 aa14.23□□□□□ -0.13
UBE3B-209ENST00000539584 FAM198AQ9UFP1 575 aa14.23□□□□□ -0.13
UBE3B-209ENST00000539584 USP15Q9Y4E8 981 aaPredicted RBP14.23□□□□□ -0.13
UBE3B-209ENST00000539584 KDM4FA0A1W2PPD8 638 aa14.22□□□□□ -0.13
UBE3B-209ENST00000539584 FSCN2O14926 492 aa14.22□□□□□ -0.13
UBE3B-209ENST00000539584 SPOPO43791 374 aa14.22□□□□□ -0.13
UBE3B-209ENST00000539584 PLA2G6O60733 806 aa14.22□□□□□ -0.13
UBE3B-209ENST00000539584 ATP6V1G2O95670 118 aa14.22□□□□□ -0.13
UBE3B-209ENST00000539584 OAS1P00973 400 aaKnown RBP14.22□□□□□ -0.13
UBE3B-209ENST00000539584 PYGMP11217 842 aa14.22□□□□□ -0.13
UBE3B-209ENST00000539584 NPR1P16066 1061 aa14.22□□□□□ -0.13
UBE3B-209ENST00000539584 POLD1P28340 1107 aa14.22□□□□□ -0.13
UBE3B-209ENST00000539584 COPB2P35606 906 aa14.22□□□□□ -0.13
UBE3B-209ENST00000539584 MESDQ14696 234 aa14.22□□□□□ -0.13
UBE3B-209ENST00000539584 SLC27A3Q5K4L6 730 aa14.22□□□□□ -0.13
UBE3B-209ENST00000539584 STRIP1Q5VSL9 837 aa14.22□□□□□ -0.13
UBE3B-209ENST00000539584 HIBCHQ6NVY1 386 aaPredicted RBP14.22□□□□□ -0.13
Retrieved 100 of 20,778 RNA–protein pairs in 34.5 ms