RNA–Protein interactions for RNA: ENST00000538492.5

RAB40C-204, Transcript of RAB40C, member RAS oncogene family, humanhuman

APPRIS P1 TSL 2 BASIC

Gene RAB40C, Length 2,569 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB40C-204ENST00000538492 CAPS2Q9BXY5 557 aa26.89■■□□□ 1.89
RAB40C-204ENST00000538492 EXOC7Q9UPT5 735 aa26.89■■□□□ 1.89
RAB40C-204ENST00000538492 DOCK5Q9H7D0 1870 aa26.89■■□□□ 1.89
RAB40C-204ENST00000538492 WDR81Q562E7 1941 aa26.88■■□□□ 1.89
RAB40C-204ENST00000538492 PARP14Q460N5 1801 aa26.88■■□□□ 1.89
RAB40C-204ENST00000538492 TMEM110-MUSTN1A8MSY1 372 aa26.88■■□□□ 1.89
RAB40C-204ENST00000538492 CYP26A1O43174 497 aa26.88■■□□□ 1.89
RAB40C-204ENST00000538492 ZNF862O60290 1169 aa26.88■■□□□ 1.89
RAB40C-204ENST00000538492 ZBTB7AO95365 584 aa26.88■■□□□ 1.89
RAB40C-204ENST00000538492 NOP9Q86U38 636 aaKnown RBP26.88■■□□□ 1.89
RAB40C-204ENST00000538492 ALG3Q92685 438 aa26.88■■□□□ 1.89
RAB40C-204ENST00000538492 TOPORSQ9NS56 1045 aaPredicted RBP26.88■■□□□ 1.89
RAB40C-204ENST00000538492 RSPH14Q9UHP6 348 aa26.88■■□□□ 1.89
RAB40C-204ENST00000538492 ALG6Q9Y672 507 aa26.88■■□□□ 1.89
RAB40C-204ENST00000538492 MAPK13O15264 365 aa26.88■■□□□ 1.89
RAB40C-204ENST00000538492 HSPA9P38646 679 aaKnown RBP26.88■■□□□ 1.89
RAB40C-204ENST00000538492 IRAK1P51617 712 aa26.88■■□□□ 1.89
RAB40C-204ENST00000538492 HMGCS2P54868 508 aa26.88■■□□□ 1.89
RAB40C-204ENST00000538492 SLC47A2Q86VL8 602 aa26.88■■□□□ 1.89
RAB40C-204ENST00000538492 MAP4K3Q8IVH8 894 aa26.88■■□□□ 1.89
RAB40C-204ENST00000538492 RHOT2Q8IXI1 618 aa26.88■■□□□ 1.89
RAB40C-204ENST00000538492 EPS8L1Q8TE68 723 aa26.88■■□□□ 1.89
RAB40C-204ENST00000538492 SLITRK6Q9H5Y7 841 aa26.88■■□□□ 1.89
RAB40C-204ENST00000538492 GINM1Q9NU53 330 aa26.88■■□□□ 1.89
RAB40C-204ENST00000538492 CNOT7Q9UIV1 285 aaKnown RBP26.88■■□□□ 1.89
RAB40C-204ENST00000538492 PLAAQ9Y263 795 aa26.88■■□□□ 1.89
RAB40C-204ENST00000538492 MAATS1Q7Z4T9 603 aa26.87■■□□□ 1.89
RAB40C-204ENST00000538492 CCDC26Q8TAB7 109 aa26.87■■□□□ 1.89
RAB40C-204ENST00000538492 WRNIP1Q96S55 665 aa26.87■■□□□ 1.89
RAB40C-204ENST00000538492 RABEP2Q9H5N1 569 aa26.87■■□□□ 1.89
RAB40C-204ENST00000538492 LCMT1Q9UIC8 334 aa26.87■■□□□ 1.89
RAB40C-204ENST00000538492 ATMINO43313 823 aaPredicted RBP26.87■■□□□ 1.89
RAB40C-204ENST00000538492 SNRPFP62306 86 aaKnown RBP26.87■■□□□ 1.89
RAB40C-204ENST00000538492 AADACL2Q6P093 401 aa26.87■■□□□ 1.89
RAB40C-204ENST00000538492 PARD3BQ8TEW8 1205 aa26.87■■□□□ 1.89
RAB40C-204ENST00000538492 CHRNB2P17787 502 aa26.86■■□□□ 1.89
RAB40C-204ENST00000538492 SWSAP1Q6NVH7 229 aa26.86■■□□□ 1.89
RAB40C-204ENST00000538492 ZNF280CQ8ND82 737 aa26.86■■□□□ 1.89
RAB40C-204ENST00000538492 DPH5Q9H2P9 285 aa26.86■■□□□ 1.89
RAB40C-204ENST00000538492 TTC7AQ9ULT0 858 aaPredicted RBP26.86■■□□□ 1.89
RAB40C-204ENST00000538492 PFASO15067 1338 aa26.86■■□□□ 1.89
RAB40C-204ENST00000538492 RGS20O76081 388 aa26.86■■□□□ 1.89
RAB40C-204ENST00000538492 FLT3P36888 993 aa26.86■■□□□ 1.89
RAB40C-204ENST00000538492 BAG6P46379 1132 aa26.86■■□□□ 1.89
RAB40C-204ENST00000538492 ATP1A2P50993 1020 aa26.86■■□□□ 1.89
RAB40C-204ENST00000538492 KRT39Q6A163 491 aa26.86■■□□□ 1.89
RAB40C-204ENST00000538492 SLC39A4Q6P5W5 647 aa26.86■■□□□ 1.89
RAB40C-204ENST00000538492 FAM71AQ8IYT1 594 aa26.86■■□□□ 1.89
RAB40C-204ENST00000538492 SCYL3Q8IZE3 742 aa26.86■■□□□ 1.89
RAB40C-204ENST00000538492 SLC17A8Q8NDX2 589 aa26.86■■□□□ 1.89
RAB40C-204ENST00000538492 SLC16A10Q8TF71 515 aa26.86■■□□□ 1.89
RAB40C-204ENST00000538492 TRIM31Q9BZY9 425 aa26.86■■□□□ 1.89
RAB40C-204ENST00000538492 CARD9Q9H257 536 aa26.86■■□□□ 1.89
RAB40C-204ENST00000538492 NOCTQ9UK39 431 aaKnown RBP26.86■■□□□ 1.89
RAB40C-204ENST00000538492 RPS12P25398 132 aaKnown RBP26.85■■□□□ 1.89
RAB40C-204ENST00000538492 HSD17B3P37058 310 aa26.85■■□□□ 1.89
RAB40C-204ENST00000538492 GNGT1P63211 74 aa26.85■■□□□ 1.89
RAB40C-204ENST00000538492 GPC5P78333 572 aa26.85■■□□□ 1.89
RAB40C-204ENST00000538492 SF3B2Q13435 895 aaKnown RBP26.85■■□□□ 1.89
RAB40C-204ENST00000538492 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP26.85■■□□□ 1.897e-7■■■■■ 86.8
RAB40C-204ENST00000538492 VTI1AQ96AJ9 217 aa26.85■■□□□ 1.89
RAB40C-204ENST00000538492 GPRASP2Q96D09 838 aa26.85■■□□□ 1.89
RAB40C-204ENST00000538492 TRIM51Q9BSJ1 452 aa26.85■■□□□ 1.89
RAB40C-204ENST00000538492 ERVK-5Q9HDB9 667 aa26.85■■□□□ 1.89
RAB40C-204ENST00000538492 ADGRA3Q8IWK6 1321 aa26.85■■□□□ 1.89
RAB40C-204ENST00000538492 BHMG1C9JSJ3 638 aaPredicted RBP26.85■■□□□ 1.89
RAB40C-204ENST00000538492 MMEP08473 750 aa26.85■■□□□ 1.89
RAB40C-204ENST00000538492 PTPRAP18433 802 aa26.85■■□□□ 1.89
RAB40C-204ENST00000538492 TGFB2P61812 414 aa26.85■■□□□ 1.89
RAB40C-204ENST00000538492 OTUD6AQ7L8S5 288 aa26.85■■□□□ 1.89
RAB40C-204ENST00000538492 EIF1ADQ8N9N8 165 aaKnown RBP26.85■■□□□ 1.89
RAB40C-204ENST00000538492 POMGNT1Q8WZA1 660 aa26.85■■□□□ 1.89
RAB40C-204ENST00000538492 FAM84AQ96KN4 292 aa26.85■■□□□ 1.89
RAB40C-204ENST00000538492 DOCK1Q14185 1865 aa26.85■■□□□ 1.89
RAB40C-204ENST00000538492 RTN2O75298 545 aa26.84■■□□□ 1.89
RAB40C-204ENST00000538492 DLATP10515 647 aaKnown RBP26.84■■□□□ 1.89
RAB40C-204ENST00000538492 KCNA2P16389 499 aa26.84■■□□□ 1.89
RAB40C-204ENST00000538492 CEP85LQ5SZL2 805 aa26.84■■□□□ 1.89
RAB40C-204ENST00000538492 TAS1R2Q8TE23 839 aa26.84■■□□□ 1.89
RAB40C-204ENST00000538492 KRT35Q92764 455 aa26.84■■□□□ 1.89
RAB40C-204ENST00000538492 PICK1Q9NRD5 415 aa26.84■■□□□ 1.89
RAB40C-204ENST00000538492 PNMA2Q9UL42 364 aa26.84■■□□□ 1.89
RAB40C-204ENST00000538492 PPFIA4O75335 1185 aa26.84■■□□□ 1.89
RAB40C-204ENST00000538492 MARCKSL1P49006 195 aa26.84■■□□□ 1.89
RAB40C-204ENST00000538492 MFAP3P55082 362 aa26.84■■□□□ 1.89
RAB40C-204ENST00000538492 REPS2Q8NFH8 660 aa26.84■■□□□ 1.89
RAB40C-204ENST00000538492 OR2W6PQ8NHA6 318 aa26.84■■□□□ 1.89
RAB40C-204ENST00000538492 DIS3Q9Y2L1 958 aaKnown RBP26.84■■□□□ 1.89
RAB40C-204ENST00000538492 UTP11Q9Y3A2 253 aaKnown RBP26.84■■□□□ 1.89
RAB40C-204ENST00000538492 CLSTN1O94985 981 aa26.83■■□□□ 1.89
RAB40C-204ENST00000538492 FDX1P10109 184 aa26.83■■□□□ 1.89
RAB40C-204ENST00000538492 POU5F1Q01860 360 aaKnown RBP26.83■■□□□ 1.89
RAB40C-204ENST00000538492 MESDQ14696 234 aa26.83■■□□□ 1.89
RAB40C-204ENST00000538492 UAP1Q16222 522 aaPredicted RBP26.83■■□□□ 1.89
RAB40C-204ENST00000538492 NSUN6Q8TEA1 469 aaKnown RBP26.83■■□□□ 1.89
RAB40C-204ENST00000538492 KIFAP3Q92845 792 aa26.83■■□□□ 1.89
RAB40C-204ENST00000538492 SEPT9Q9UHD8 586 aaPredicted RBP26.83■■□□□ 1.89
RAB40C-204ENST00000538492 ZNF214Q9UL59 606 aaPredicted RBP26.83■■□□□ 1.89
RAB40C-204ENST00000538492 HNRNPDLO14979 420 aaKnown RBP26.83■■□□□ 1.89
RAB40C-204ENST00000538492 DCAF15Q66K64 600 aa26.83■■□□□ 1.89
Retrieved 100 of 20,778 RNA–protein pairs in 27.2 ms