RNA–Protein interactions for RNA: ENST00000537429.5

HMGA2-208, Transcript of high mobility group AT-hook 2, humanhuman

TSL 1 (best)

Gene HMGA2, Length 1,527 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGA2-208ENST00000537429 ZMYND8Q9ULU4 1186 aaPredicted RBP26.56■■□□□ 1.84
HMGA2-208ENST00000537429 TRAF3IP3Q9Y228 551 aa26.56■■□□□ 1.84
HMGA2-208ENST00000537429 TNFSF13BQ9Y275 285 aa26.56■■□□□ 1.84
HMGA2-208ENST00000537429 TISP43B9A030 160 aa26.55■■□□□ 1.84
HMGA2-208ENST00000537429 TOM1L1O75674 476 aa26.55■■□□□ 1.84
HMGA2-208ENST00000537429 PROZP22891 400 aa26.55■■□□□ 1.84
HMGA2-208ENST00000537429 PMS1P54277 932 aaKnown RBP26.55■■□□□ 1.84
HMGA2-208ENST00000537429 SNRPFP62306 86 aaKnown RBP26.55■■□□□ 1.84
HMGA2-208ENST00000537429 PAK1Q13153 545 aa26.55■■□□□ 1.84
HMGA2-208ENST00000537429 ANO6Q4KMQ2 910 aa26.55■■□□□ 1.84
HMGA2-208ENST00000537429 HS2ST1Q7LGA3 356 aa26.55■■□□□ 1.84
HMGA2-208ENST00000537429 TMEM199Q8N511 208 aa26.55■■□□□ 1.84
HMGA2-208ENST00000537429 NELFBQ8WX92 580 aa26.55■■□□□ 1.84
HMGA2-208ENST00000537429 VWCEQ96DN2 955 aa26.55■■□□□ 1.84
HMGA2-208ENST00000537429 TMX1Q9H3N1 280 aa26.55■■□□□ 1.84
HMGA2-208ENST00000537429 CHST12Q9NRB3 414 aa26.55■■□□□ 1.84
HMGA2-208ENST00000537429 PCDH10Q9P2E7 1040 aa26.55■■□□□ 1.84
HMGA2-208ENST00000537429 CTNND2Q9UQB3 1225 aa26.55■■□□□ 1.84
HMGA2-208ENST00000537429 PIN4Q9Y237 131 aaKnown RBP26.55■■□□□ 1.84
HMGA2-208ENST00000537429 NR2E3Q9Y5X4 410 aa26.55■■□□□ 1.84
HMGA2-208ENST00000537429 STYXL1Q9Y6J8 313 aa26.55■■□□□ 1.84
HMGA2-208ENST00000537429 ERCC5P28715 1186 aaPredicted RBP26.55■■□□□ 1.84
HMGA2-208ENST00000537429 NOTUMQ6P988 496 aa26.55■■□□□ 1.84
HMGA2-208ENST00000537429 DEFB128Q7Z7B8 93 aa26.55■■□□□ 1.84
HMGA2-208ENST00000537429 DBF4BQ8NFT6 615 aa26.55■■□□□ 1.84
HMGA2-208ENST00000537429 ZBTB45Q96K62 511 aaPredicted RBP26.55■■□□□ 1.84
HMGA2-208ENST00000537429 MED15Q96RN5 788 aa26.55■■□□□ 1.84
HMGA2-208ENST00000537429 PDZD7Q9H5P4 517 aa26.55■■□□□ 1.84
HMGA2-208ENST00000537429 AGPAT3Q9NRZ7 376 aa26.55■■□□□ 1.84
HMGA2-208ENST00000537429 CGNQ9P2M7 1197 aaKnown RBP26.55■■□□□ 1.84
HMGA2-208ENST00000537429 ABLIM1O14639 778 aa26.54■■□□□ 1.84
HMGA2-208ENST00000537429 ADSSP30520 456 aa26.54■■□□□ 1.84
HMGA2-208ENST00000537429 EEF1DP3Q658K8 133 aa26.54■■□□□ 1.84
HMGA2-208ENST00000537429 ANKRD40Q6AI12 368 aa26.54■■□□□ 1.84
HMGA2-208ENST00000537429 FOXR2Q6PJQ5 311 aa26.54■■□□□ 1.84
HMGA2-208ENST00000537429 CDR2LQ86X02 465 aaPredicted RBP26.54■■□□□ 1.84
HMGA2-208ENST00000537429 GOLGA5Q8TBA6 731 aa26.54■■□□□ 1.84
HMGA2-208ENST00000537429 ANP32EQ9BTT0 268 aa26.54■■□□□ 1.84
HMGA2-208ENST00000537429 RWDD2AQ9UIY3 292 aa26.54■■□□□ 1.84
HMGA2-208ENST00000537429 TRIM49BA6NDI0 452 aa26.53■■□□□ 1.84
HMGA2-208ENST00000537429 N4BP3O15049 544 aa26.53■■□□□ 1.84
HMGA2-208ENST00000537429 CSF2RAP15509 400 aa26.53■■□□□ 1.84
HMGA2-208ENST00000537429 STX17P56962 302 aa26.53■■□□□ 1.84
HMGA2-208ENST00000537429 LRRC63Q05C16 580 aa26.53■■□□□ 1.84
HMGA2-208ENST00000537429 SLFN12LQ6IEE8 588 aa26.53■■□□□ 1.84
HMGA2-208ENST00000537429 TTI2Q6NXR4 508 aa26.53■■□□□ 1.84
HMGA2-208ENST00000537429 FAM43BQ6ZT52 329 aaPredicted RBP26.53■■□□□ 1.84
HMGA2-208ENST00000537429 HAPLN2Q9GZV7 340 aa26.53■■□□□ 1.84
HMGA2-208ENST00000537429 TET1Q8NFU7 2136 aa26.53■■□□□ 1.84
HMGA2-208ENST00000537429 BICDL2A1A5D9 508 aa26.52■■□□□ 1.84
HMGA2-208ENST00000537429 CLDN3O15551 220 aa26.52■■□□□ 1.84
HMGA2-208ENST00000537429 CALUO43852 315 aaPredicted RBP26.52■■□□□ 1.84
HMGA2-208ENST00000537429 DSC3Q14574 896 aa26.52■■□□□ 1.84
HMGA2-208ENST00000537429 MPZL3Q6UWV2 235 aa26.52■■□□□ 1.84
HMGA2-208ENST00000537429 C12orf56Q8IXR9 622 aa26.52■■□□□ 1.84
HMGA2-208ENST00000537429 TMEM174Q8WUU8 243 aa26.52■■□□□ 1.84
HMGA2-208ENST00000537429 SEPT8Q92599 483 aa26.52■■□□□ 1.84
HMGA2-208ENST00000537429 APBB2Q92870 758 aa26.52■■□□□ 1.84
HMGA2-208ENST00000537429 BADQ92934 168 aa26.52■■□□□ 1.84
HMGA2-208ENST00000537429 CCDC51Q96ER9 411 aa26.52■■□□□ 1.84
HMGA2-208ENST00000537429 LTBP2Q14767 1821 aa26.51■■□□□ 1.83
HMGA2-208ENST00000537429 CLIC2O15247 247 aa26.51■■□□□ 1.83
HMGA2-208ENST00000537429 MGEA5O60502 916 aa26.51■■□□□ 1.83
HMGA2-208ENST00000537429 ZSCAN20P17040 1043 aaPredicted RBP26.51■■□□□ 1.83
HMGA2-208ENST00000537429 GARTP22102 1010 aa26.51■■□□□ 1.83
HMGA2-208ENST00000537429 MCL1Q07820 350 aa26.51■■□□□ 1.83
HMGA2-208ENST00000537429 NFIL3Q16649 462 aa26.51■■□□□ 1.83
HMGA2-208ENST00000537429 EDRF1Q3B7T1 1238 aa26.51■■□□□ 1.83
HMGA2-208ENST00000537429 ARMCX5Q6P1M9 558 aa26.51■■□□□ 1.83
HMGA2-208ENST00000537429 SLC27A1Q6PCB7 646 aa26.51■■□□□ 1.83
HMGA2-208ENST00000537429 TSG101Q99816 390 aa26.51■■□□□ 1.83
HMGA2-208ENST00000537429 CBWD1Q9BRT8 395 aa26.51■■□□□ 1.83
HMGA2-208ENST00000537429 TCHPQ9BT92 498 aa26.51■■□□□ 1.83
HMGA2-208ENST00000537429 FTHL17Q9BXU8 183 aa26.51■■□□□ 1.83
HMGA2-208ENST00000537429 NAT10Q9H0A0 1025 aaKnown RBP26.51■■□□□ 1.83
HMGA2-208ENST00000537429 ANKFY1Q9P2R3 1169 aa26.51■■□□□ 1.83
HMGA2-208ENST00000537429 A0A0B4J269 797 aa26.5■■□□□ 1.83
HMGA2-208ENST00000537429 ZNF568Q3ZCX4 644 aa26.5■■□□□ 1.83
HMGA2-208ENST00000537429 POMGNT1Q8WZA1 660 aa26.5■■□□□ 1.83
HMGA2-208ENST00000537429 DUSP9Q99956 384 aaKnown RBP26.5■■□□□ 1.83
HMGA2-208ENST00000537429 LBHD1Q9BQE6 289 aaPredicted RBP26.5■■□□□ 1.83
HMGA2-208ENST00000537429 ADPGKQ9BRR6 497 aa26.5■■□□□ 1.83
HMGA2-208ENST00000537429 CDT1Q9H211 546 aa26.5■■□□□ 1.83
HMGA2-208ENST00000537429 DMAC2Q9NW81 257 aa26.5■■□□□ 1.83
HMGA2-208ENST00000537429 MYBPC2Q14324 1141 aa26.49■■□□□ 1.83
HMGA2-208ENST00000537429 TCTN1Q2MV58 587 aa26.49■■□□□ 1.83
HMGA2-208ENST00000537429 UBXN11Q5T124 520 aa26.49■■□□□ 1.83
HMGA2-208ENST00000537429 TWF2Q6IBS0 349 aaKnown RBP26.49■■□□□ 1.83
HMGA2-208ENST00000537429 RTN4RL1Q86UN2 441 aaPredicted RBP26.49■■□□□ 1.83
HMGA2-208ENST00000537429 SLC9A9Q8IVB4 645 aa26.49■■□□□ 1.83
HMGA2-208ENST00000537429 RPUSD2Q8IZ73 545 aaKnown RBP26.49■■□□□ 1.83
HMGA2-208ENST00000537429 ADAM2Q99965 735 aa26.49■■□□□ 1.83
HMGA2-208ENST00000537429 BPIFA3Q9BQP9 254 aa26.49■■□□□ 1.83
HMGA2-208ENST00000537429 TRAIPQ9BWF2 469 aa26.49■■□□□ 1.83
HMGA2-208ENST00000537429 TSPY26PQ9H489 355 aa26.49■■□□□ 1.83
HMGA2-208ENST00000537429 CAVIN2O95810 425 aa26.49■■□□□ 1.83
HMGA2-208ENST00000537429 NR3C1P04150 777 aa26.49■■□□□ 1.83
HMGA2-208ENST00000537429 PFKMP08237 780 aa26.49■■□□□ 1.83
HMGA2-208ENST00000537429 ZNF165P49910 485 aa26.49■■□□□ 1.83
HMGA2-208ENST00000537429 FPGSQ05932 587 aa26.49■■□□□ 1.83
Retrieved 100 of 20,778 RNA–protein pairs in 39.1 ms