RNA–Protein interactions for RNA: ENST00000534556.1

USH1C-210, Transcript of USH1 protein network component harmonin, humanhuman

TSL 3

Gene USH1C, Length 244 nt, Biotype retained intron, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USH1C-210ENST00000534556 CABP7Q86V35 215 aa5.61□□□□□ -1.51
USH1C-210ENST00000534556 ZNF710Q8N1W2 664 aa5.61□□□□□ -1.51
USH1C-210ENST00000534556 CEP120Q8N960 986 aa5.61□□□□□ -1.51
USH1C-210ENST00000534556 SYT2Q8N9I0 419 aaPredicted RBP5.61□□□□□ -1.51
USH1C-210ENST00000534556 ATXN2LQ8WWM7 1075 aaKnown RBP5.61□□□□□ -1.51
USH1C-210ENST00000534556 FOXD4L4Q8WXT5 416 aaPredicted RBP5.61□□□□□ -1.51
USH1C-210ENST00000534556 INTS4Q96HW7 963 aaKnown RBP5.61□□□□□ -1.51
USH1C-210ENST00000534556 MSLNLQ96KJ4 702 aa5.61□□□□□ -1.51
USH1C-210ENST00000534556 FIZ1Q96SL8 496 aa5.61□□□□□ -1.51
USH1C-210ENST00000534556 GAD1Q99259 594 aa5.61□□□□□ -1.51
USH1C-210ENST00000534556 JPH2Q9BR39 696 aaPredicted RBP5.61□□□□□ -1.51
USH1C-210ENST00000534556 PLVAPQ9BX97 442 aa5.61□□□□□ -1.51
USH1C-210ENST00000534556 NFKBIZQ9BYH8 718 aa5.61□□□□□ -1.51
USH1C-210ENST00000534556 INO80BQ9C086 356 aaPredicted RBP5.61□□□□□ -1.51
USH1C-210ENST00000534556 CSRNP2Q9H175 543 aa5.61□□□□□ -1.51
USH1C-210ENST00000534556 UBE2ZQ9H832 354 aaPredicted RBP5.61□□□□□ -1.51
USH1C-210ENST00000534556 MARCH5Q9NX47 278 aa5.61□□□□□ -1.51
USH1C-210ENST00000534556 KLK14Q9P0G3 267 aa5.61□□□□□ -1.51
USH1C-210ENST00000534556 TFIP11Q9UBB9 837 aaKnown RBP5.61□□□□□ -1.51
USH1C-210ENST00000534556 KIF26AQ9ULI4 1882 aaPredicted RBP5.61□□□□□ -1.51
USH1C-210ENST00000534556 INPP5FQ9Y2H2 1132 aa5.61□□□□□ -1.51
USH1C-210ENST00000534556 PTPRDP23468 1912 aa5.6□□□□□ -1.51
USH1C-210ENST00000534556 ANAPC1Q9H1A4 1944 aa5.6□□□□□ -1.51
USH1C-210ENST00000534556 KMT2EQ8IZD2 1858 aa5.6□□□□□ -1.51
USH1C-210ENST00000534556 CNTNAP2Q9UHC6 1331 aa5.6□□□□□ -1.51
USH1C-210ENST00000534556 ARL5CA6NH57 179 aa5.6□□□□□ -1.51
USH1C-210ENST00000534556 LAD1O00515 517 aa5.6□□□□□ -1.51
USH1C-210ENST00000534556 STX6O43752 255 aa5.6□□□□□ -1.51
USH1C-210ENST00000534556 LILRB3O75022 631 aa5.6□□□□□ -1.51
USH1C-210ENST00000534556 ZC3H11AO75152 810 aaKnown RBP eCLIP5.6□□□□□ -1.51
USH1C-210ENST00000534556 PRKCBP05771 671 aa5.6□□□□□ -1.51
USH1C-210ENST00000534556 PLA2G4BP0C869 781 aa5.6□□□□□ -1.51
USH1C-210ENST00000534556 PLCG1P19174 1290 aa5.6□□□□□ -1.51
USH1C-210ENST00000534556 KCNA5P22460 613 aa5.6□□□□□ -1.51
USH1C-210ENST00000534556 MLH1P40692 756 aa5.6□□□□□ -1.51
USH1C-210ENST00000534556 NAMPTP43490 491 aa5.6□□□□□ -1.51
USH1C-210ENST00000534556 NRIP1P48552 1158 aa5.6□□□□□ -1.51
USH1C-210ENST00000534556 SCNN1GP51170 649 aa5.6□□□□□ -1.51
USH1C-210ENST00000534556 PEX3P56589 373 aa5.6□□□□□ -1.51
USH1C-210ENST00000534556 MRPS5P82675 430 aaKnown RBP5.6□□□□□ -1.51
USH1C-210ENST00000534556 CDC42EP1Q00587 391 aa5.6□□□□□ -1.51
USH1C-210ENST00000534556 PLCB3Q01970 1234 aa5.6□□□□□ -1.51
USH1C-210ENST00000534556 DSC1Q08554 894 aa5.6□□□□□ -1.51
USH1C-210ENST00000534556 DHX8Q14562 1220 aaKnown RBP5.6□□□□□ -1.51
USH1C-210ENST00000534556 SKIV2LQ15477 1246 aaKnown RBP5.6□□□□□ -1.51
USH1C-210ENST00000534556 ZRSR1Q15695 479 aaKnown RBP5.6□□□□□ -1.51
USH1C-210ENST00000534556 CLUL1Q15846 466 aa5.6□□□□□ -1.51
USH1C-210ENST00000534556 FOXD4L6Q3SYB3 417 aaPredicted RBP5.6□□□□□ -1.51
USH1C-210ENST00000534556 SEZ6Q53EL9 994 aa5.6□□□□□ -1.51
USH1C-210ENST00000534556 NOMO2Q5JPE7 1267 aa5.6□□□□□ -1.51
USH1C-210ENST00000534556 TJAP1Q5JTD0 557 aa5.6□□□□□ -1.51
USH1C-210ENST00000534556 ODR4Q5SWX8 454 aa5.6□□□□□ -1.51
USH1C-210ENST00000534556 SPOUT1Q5T280 376 aaKnown RBP5.6□□□□□ -1.51
USH1C-210ENST00000534556 PLPP4Q5VZY2 271 aa5.6□□□□□ -1.51
USH1C-210ENST00000534556 ARL6IP4Q66PJ3 421 aaKnown RBP5.6□□□□□ -1.51
USH1C-210ENST00000534556 SLC39A4Q6P5W5 647 aa5.6□□□□□ -1.51
USH1C-210ENST00000534556 FOXD4L3Q6VB84 417 aaPredicted RBP5.6□□□□□ -1.51
USH1C-210ENST00000534556 BRAPQ7Z569 592 aa5.6□□□□□ -1.51
USH1C-210ENST00000534556 RBM23Q86U06 439 aaKnown RBP5.6□□□□□ -1.51
USH1C-210ENST00000534556 COLGALT2Q8IYK4 626 aa5.6□□□□□ -1.51
USH1C-210ENST00000534556 RNF168Q8IYW5 571 aaPredicted RBP5.6□□□□□ -1.51
USH1C-210ENST00000534556 MCPH1Q8NEM0 835 aa5.6□□□□□ -1.51
USH1C-210ENST00000534556 IL27Q8NEV9 243 aa5.6□□□□□ -1.51
USH1C-210ENST00000534556 ADAMTS19Q8TE59 1207 aa5.6□□□□□ -1.51
USH1C-210ENST00000534556 MRPS27Q92552 414 aaKnown RBP5.6□□□□□ -1.51
USH1C-210ENST00000534556 HLA-CQ95604 372 aa5.6□□□□□ -1.51
USH1C-210ENST00000534556 PABPC5Q96DU9 382 aaKnown RBP5.6□□□□□ -1.51
USH1C-210ENST00000534556 C11orf84Q9BUA3 381 aaPredicted RBP5.6□□□□□ -1.51
USH1C-210ENST00000534556 APOL6Q9BWW8 343 aa5.6□□□□□ -1.51
USH1C-210ENST00000534556 FGFBP2Q9BYJ0 223 aa5.6□□□□□ -1.51
USH1C-210ENST00000534556 GBP3Q9H0R5 595 aa5.6□□□□□ -1.51
USH1C-210ENST00000534556 LMAN2LQ9H0V9 348 aa5.6□□□□□ -1.51
USH1C-210ENST00000534556 NSUN3Q9H649 340 aaKnown RBP5.6□□□□□ -1.51
USH1C-210ENST00000534556 IGFLR1Q9H665 355 aa5.6□□□□□ -1.51
USH1C-210ENST00000534556 RSAD1Q9HA92 442 aa5.6□□□□□ -1.51
USH1C-210ENST00000534556 PTPRHQ9HD43 1115 aa5.6□□□□□ -1.51
USH1C-210ENST00000534556 SNTG2Q9NY99 539 aa5.6□□□□□ -1.51
USH1C-210ENST00000534556 DACT1Q9NYF0 836 aa5.6□□□□□ -1.51
USH1C-210ENST00000534556 ARHGAP28Q9P2N2 729 aa5.6□□□□□ -1.51
USH1C-210ENST00000534556 KIF3AQ9Y496 699 aa5.6□□□□□ -1.51
USH1C-210ENST00000534556 MYH10P35580 1976 aa5.59□□□□□ -1.51
USH1C-210ENST00000534556 C2orf71A6NGG8 1288 aa5.59□□□□□ -1.51
USH1C-210ENST00000534556 TISP43B9A030 160 aa5.59□□□□□ -1.51
USH1C-210ENST00000534556 ACKR2O00590 384 aa5.59□□□□□ -1.51
USH1C-210ENST00000534556 NRP1O14786 923 aa5.59□□□□□ -1.51
USH1C-210ENST00000534556 SLC16A4O15374 487 aa5.59□□□□□ -1.51
USH1C-210ENST00000534556 MBTPS2O43462 519 aa5.59□□□□□ -1.51
USH1C-210ENST00000534556 FAM189A1O60320 539 aa5.59□□□□□ -1.51
USH1C-210ENST00000534556 RECQL4O94761 1208 aa5.59□□□□□ -1.51
USH1C-210ENST00000534556 ERLIN2O94905 339 aa5.59□□□□□ -1.51
USH1C-210ENST00000534556 ITGA4P13612 1032 aa5.59□□□□□ -1.51
USH1C-210ENST00000534556 LAG3P18627 525 aa5.59□□□□□ -1.51
USH1C-210ENST00000534556 LIG1P18858 919 aa5.59□□□□□ -1.51
USH1C-210ENST00000534556 PROZP22891 400 aa5.59□□□□□ -1.51
USH1C-210ENST00000534556 GUCY2CP25092 1073 aa5.59□□□□□ -1.51
USH1C-210ENST00000534556 NASPP49321 788 aaPredicted RBP5.59□□□□□ -1.51
USH1C-210ENST00000534556 SOX4Q06945 474 aaPredicted RBP5.59□□□□□ -1.51
USH1C-210ENST00000534556 GIT2Q14161 759 aa5.59□□□□□ -1.51
USH1C-210ENST00000534556 SLC39A14Q15043 492 aa5.59□□□□□ -1.51
USH1C-210ENST00000534556 DUSP6Q16828 381 aa5.59□□□□□ -1.51
Retrieved 100 of 20,778 RNA–protein pairs in 19.2 ms