RNA–Protein interactions for RNA: ENST00000533011.5

CHMP4A-206, Transcript of charged multivesicular body protein 4A, humanhuman

TSL 5

Gene CHMP4A, Length 733 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP4A-206ENST00000533011 FXR2P51116 673 aaKnown RBP eCLIP11.33□□□□□ -0.62e-8■■□□□ 13.1
CHMP4A-206ENST00000533011 PTGDRQ13258 359 aa11.33□□□□□ -0.6
CHMP4A-206ENST00000533011 PDIA5Q14554 519 aa11.33□□□□□ -0.6
CHMP4A-206ENST00000533011 ZNF528Q3MIS6 628 aa11.33□□□□□ -0.6
CHMP4A-206ENST00000533011 VARS2Q5ST30 1063 aaKnown RBP11.33□□□□□ -0.6
CHMP4A-206ENST00000533011 KIAA1841Q6NSI8 718 aa11.33□□□□□ -0.6
CHMP4A-206ENST00000533011 OTOP3Q7RTS5 596 aa11.33□□□□□ -0.6
CHMP4A-206ENST00000533011 FAM228AQ86W67 206 aa11.33□□□□□ -0.6
CHMP4A-206ENST00000533011 CATSPER3Q86XQ3 398 aa11.33□□□□□ -0.6
CHMP4A-206ENST00000533011 RHPN2Q8IUC4 686 aa11.33□□□□□ -0.6
CHMP4A-206ENST00000533011 SIX5Q8N196 739 aa11.33□□□□□ -0.6
CHMP4A-206ENST00000533011 ERMNQ8TAM6 284 aa11.33□□□□□ -0.6
CHMP4A-206ENST00000533011 NLRP7Q8WX94 980 aa11.33□□□□□ -0.6
CHMP4A-206ENST00000533011 LINC01599Q8WXQ3 324 aa11.33□□□□□ -0.6
CHMP4A-206ENST00000533011 COL26A1Q96A83 441 aa11.33□□□□□ -0.6
CHMP4A-206ENST00000533011 INTS4Q96HW7 963 aaKnown RBP11.33□□□□□ -0.6
CHMP4A-206ENST00000533011 SCLT1Q96NL6 688 aa11.33□□□□□ -0.6
CHMP4A-206ENST00000533011 TCF25Q9BQ70 676 aa11.33□□□□□ -0.6
CHMP4A-206ENST00000533011 POLR3CQ9BUI4 534 aaPredicted RBP11.33□□□□□ -0.6
CHMP4A-206ENST00000533011 TUFT1Q9NNX1 390 aa11.33□□□□□ -0.6
CHMP4A-206ENST00000533011 ENTPD7Q9NQZ7 604 aa11.33□□□□□ -0.6
CHMP4A-206ENST00000533011 EIF4ENIF1Q9NRA8 985 aaKnown RBP11.33□□□□□ -0.6
CHMP4A-206ENST00000533011 DBR1Q9UK59 544 aaKnown RBP11.33□□□□□ -0.6
CHMP4A-206ENST00000533011 USP24Q9UPU5 2620 aa11.33□□□□□ -0.6
CHMP4A-206ENST00000533011 ANKRD11Q6UB99 2663 aaPredicted RBP11.32□□□□□ -0.6
CHMP4A-206ENST00000533011 ARID2Q68CP9 1835 aa11.32□□□□□ -0.6
CHMP4A-206ENST00000533011 DENND3A2RUS2 1198 aa11.32□□□□□ -0.6
CHMP4A-206ENST00000533011 SPTLC1O15269 473 aa11.32□□□□□ -0.6
CHMP4A-206ENST00000533011 GAS2O43903 313 aaKnown RBP11.32□□□□□ -0.6
CHMP4A-206ENST00000533011 SPATA31C1P0DKV0 1188 aa11.32□□□□□ -0.6
CHMP4A-206ENST00000533011 DARSP14868 501 aaKnown RBP11.32□□□□□ -0.6
CHMP4A-206ENST00000533011 RPA1P27694 616 aa11.32□□□□□ -0.6
CHMP4A-206ENST00000533011 PPM1AP35813 382 aa11.32□□□□□ -0.6
CHMP4A-206ENST00000533011 PRPHP41219 470 aa11.32□□□□□ -0.6
CHMP4A-206ENST00000533011 SARSP49591 514 aaKnown RBP11.32□□□□□ -0.6
CHMP4A-206ENST00000533011 DMWDQ09019 674 aa11.32□□□□□ -0.6
CHMP4A-206ENST00000533011 LLGL2Q6P1M3 1020 aa11.32□□□□□ -0.6
CHMP4A-206ENST00000533011 ZNF410Q86VK4 478 aa11.32□□□□□ -0.6
CHMP4A-206ENST00000533011 C1orf210Q8IVY1 113 aa11.32□□□□□ -0.6
CHMP4A-206ENST00000533011 DCLK2Q8N568 766 aa11.32□□□□□ -0.6
CHMP4A-206ENST00000533011 PIGOQ8TEQ8 1089 aa11.32□□□□□ -0.6
CHMP4A-206ENST00000533011 TCP11Q8WWU5 503 aa11.32□□□□□ -0.6
CHMP4A-206ENST00000533011 SNX21Q969T3 373 aa11.32□□□□□ -0.6
CHMP4A-206ENST00000533011 ZNF668Q96K58 619 aaPredicted RBP11.32□□□□□ -0.6
CHMP4A-206ENST00000533011 CCDC43Q96MW1 224 aaKnown RBP11.32□□□□□ -0.6
CHMP4A-206ENST00000533011 NACC1Q96RE7 527 aa11.32□□□□□ -0.6
CHMP4A-206ENST00000533011 ADAM2Q99965 735 aa11.32□□□□□ -0.6
CHMP4A-206ENST00000533011 APOL5Q9BWW9 433 aa11.32□□□□□ -0.6
CHMP4A-206ENST00000533011 GCOM2Q9BZD3 368 aaPredicted RBP11.32□□□□□ -0.6
CHMP4A-206ENST00000533011 RAB34Q9BZG1 259 aa11.32□□□□□ -0.6
CHMP4A-206ENST00000533011 INO80BQ9C086 356 aaPredicted RBP11.32□□□□□ -0.6
CHMP4A-206ENST00000533011 SMOC2Q9H3U7 446 aa11.32□□□□□ -0.6
CHMP4A-206ENST00000533011 RGS18Q9NS28 235 aa11.32□□□□□ -0.6
CHMP4A-206ENST00000533011 C1orf112Q9NSG2 853 aa11.32□□□□□ -0.6
CHMP4A-206ENST00000533011 NCDNQ9UBB6 729 aa11.32□□□□□ -0.6
CHMP4A-206ENST00000533011 LRWD1Q9UFC0 647 aa11.32□□□□□ -0.6
CHMP4A-206ENST00000533011 HCFC2Q9Y5Z7 792 aa11.32□□□□□ -0.6
CHMP4A-206ENST00000533011 STK24Q9Y6E0 443 aa11.32□□□□□ -0.6
CHMP4A-206ENST00000533011 A0A087WZ62 844 aa11.31□□□□□ -0.6
CHMP4A-206ENST00000533011 ASAP2O43150 1006 aa11.31□□□□□ -0.6
CHMP4A-206ENST00000533011 MGEA5O60502 916 aa11.31□□□□□ -0.6
CHMP4A-206ENST00000533011 MED24O75448 989 aa11.31□□□□□ -0.6
CHMP4A-206ENST00000533011 DGAT1O75907 488 aa11.31□□□□□ -0.6
CHMP4A-206ENST00000533011 ZSCAN20P17040 1043 aaPredicted RBP11.31□□□□□ -0.6
CHMP4A-206ENST00000533011 MUTP22033 750 aa11.31□□□□□ -0.6
CHMP4A-206ENST00000533011 RARRES1P49788 294 aa11.31□□□□□ -0.6
CHMP4A-206ENST00000533011 EMC2Q15006 297 aa11.31□□□□□ -0.6
CHMP4A-206ENST00000533011 PLPP4Q5VZY2 271 aa11.31□□□□□ -0.6
CHMP4A-206ENST00000533011 HAUS3Q68CZ6 603 aa11.31□□□□□ -0.6
CHMP4A-206ENST00000533011 PHLDB3Q6NSJ2 640 aa11.31□□□□□ -0.6
CHMP4A-206ENST00000533011 DTHD1Q6ZMT9 781 aa11.31□□□□□ -0.6
CHMP4A-206ENST00000533011 SLC24A5Q71RS6 500 aa11.31□□□□□ -0.6
CHMP4A-206ENST00000533011 TMC7Q7Z402 723 aa11.31□□□□□ -0.6
CHMP4A-206ENST00000533011 BRAPQ7Z569 592 aa11.31□□□□□ -0.6
CHMP4A-206ENST00000533011 KSR1Q8IVT5 923 aa11.31□□□□□ -0.6
CHMP4A-206ENST00000533011 MRPL43Q8N983 215 aaKnown RBP11.31□□□□□ -0.6
CHMP4A-206ENST00000533011 IGSF22Q8N9C0 903 aa11.31□□□□□ -0.6
CHMP4A-206ENST00000533011 COLGALT1Q8NBJ5 622 aa11.31□□□□□ -0.6
CHMP4A-206ENST00000533011 PRPF31Q8WWY3 499 aaKnown RBP11.31□□□□□ -0.6
CHMP4A-206ENST00000533011 PSPC1Q8WXF1 523 aaKnown RBP11.31□□□□□ -0.6
CHMP4A-206ENST00000533011 NXPE3Q969Y0 559 aa11.31□□□□□ -0.6
CHMP4A-206ENST00000533011 TMEM143Q96AN5 459 aa11.31□□□□□ -0.6
CHMP4A-206ENST00000533011 MTRQ99707 1265 aa11.31□□□□□ -0.6
CHMP4A-206ENST00000533011 FDXACB1Q9BRP7 624 aaPredicted RBP11.31□□□□□ -0.6
CHMP4A-206ENST00000533011 TYW1Q9NV66 732 aaKnown RBP11.31□□□□□ -0.6
CHMP4A-206ENST00000533011 COL4A3BPQ9Y5P4 624 aa11.31□□□□□ -0.6
CHMP4A-206ENST00000533011 A0A087WWV3 80 aa11.3□□□□□ -0.6
CHMP4A-206ENST00000533011 VPS37CA5D8V6 355 aaPredicted RBP11.3□□□□□ -0.6
CHMP4A-206ENST00000533011 CARNS1A5YM72 827 aa11.3□□□□□ -0.6
CHMP4A-206ENST00000533011 C9IYK1 514 aa11.3□□□□□ -0.6
CHMP4A-206ENST00000533011 SFPQP23246 707 aaKnown RBP eCLIP11.3□□□□□ -0.6
CHMP4A-206ENST00000533011 CCT6AP40227 531 aaKnown RBP11.3□□□□□ -0.6
CHMP4A-206ENST00000533011 ATP2C1P98194 919 aaPredicted RBP11.3□□□□□ -0.6
CHMP4A-206ENST00000533011 GIT2Q14161 759 aa11.3□□□□□ -0.6
CHMP4A-206ENST00000533011 DSC3Q14574 896 aa11.3□□□□□ -0.6
CHMP4A-206ENST00000533011 MXD4Q14582 209 aaPredicted RBP11.3□□□□□ -0.6
CHMP4A-206ENST00000533011 SMC1AQ14683 1233 aaKnown RBP11.3□□□□□ -0.6
CHMP4A-206ENST00000533011 FERMT3Q86UX7 667 aa11.3□□□□□ -0.6
CHMP4A-206ENST00000533011 NLRP4Q96MN2 994 aa11.3□□□□□ -0.6
CHMP4A-206ENST00000533011 KCNK12Q9HB15 430 aa11.3□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 27.9 ms