RNA–Protein interactions for RNA: ENST00000529986.5

CTNND1-223, Transcript of catenin delta 1, humanhuman

TSL 1 (best) BASIC

Gene CTNND1, Length 5,727 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNND1-223ENST00000529986 DPY19L2Q6NUT2 758 aa8.1□□□□□ -1.11
CTNND1-223ENST00000529986 TMEM270Q6UE05 265 aa8.1□□□□□ -1.11
CTNND1-223ENST00000529986 PPP4R3CPQ6ZMV5 832 aa8.1□□□□□ -1.11
CTNND1-223ENST00000529986 NCAPG2Q86XI2 1143 aa8.1□□□□□ -1.11
CTNND1-223ENST00000529986 VPS39Q96JC1 886 aa8.1□□□□□ -1.11
CTNND1-223ENST00000529986 PNKPQ96T60 521 aa8.1□□□□□ -1.11
CTNND1-223ENST00000529986 OLFML3Q9NRN5 406 aa8.1□□□□□ -1.11
CTNND1-223ENST00000529986 AGPAT5Q9NUQ2 364 aa8.1□□□□□ -1.11
CTNND1-223ENST00000529986 PSD3Q9NYI0 1048 aa8.1□□□□□ -1.11
CTNND1-223ENST00000529986 ADGRL3Q9HAR2 1447 aa8.09□□□□□ -1.11
CTNND1-223ENST00000529986 E2F8A0AVK6 867 aa8.09□□□□□ -1.11
CTNND1-223ENST00000529986 RAD51CO43502 376 aa8.09□□□□□ -1.11
CTNND1-223ENST00000529986 PDHBP11177 359 aa8.09□□□□□ -1.11
CTNND1-223ENST00000529986 GYS1P13807 737 aa8.09□□□□□ -1.11
CTNND1-223ENST00000529986 ARSEP51690 589 aa8.09□□□□□ -1.11
CTNND1-223ENST00000529986 CLEC17AQ6ZS10 378 aa8.09□□□□□ -1.11
CTNND1-223ENST00000529986 RHPN2Q8IUC4 686 aa8.09□□□□□ -1.11
CTNND1-223ENST00000529986 ENAHQ8N8S7 591 aaPredicted RBP8.09□□□□□ -1.11
CTNND1-223ENST00000529986 ATP6V0A1Q93050 837 aa8.09□□□□□ -1.11
CTNND1-223ENST00000529986 EME1Q96AY2 570 aa8.09□□□□□ -1.11
CTNND1-223ENST00000529986 HIC2Q96JB3 615 aa8.09□□□□□ -1.11
CTNND1-223ENST00000529986 ACAP3Q96P50 834 aa8.09□□□□□ -1.11
CTNND1-223ENST00000529986 TSSK1BQ9BXA7 367 aa8.09□□□□□ -1.11
CTNND1-223ENST00000529986 WWP1Q9H0M0 922 aa8.09□□□□□ -1.11
CTNND1-223ENST00000529986 INO80Q9ULG1 1556 aaPredicted RBP8.09□□□□□ -1.11
CTNND1-223ENST00000529986 B2RBV5 119 aa8.09□□□□□ -1.11
CTNND1-223ENST00000529986 AKAP10O43572 662 aa8.09□□□□□ -1.11
CTNND1-223ENST00000529986 DEAF1O75398 565 aaPredicted RBP8.09□□□□□ -1.11
CTNND1-223ENST00000529986 CIAO1O76071 339 aa8.09□□□□□ -1.11
CTNND1-223ENST00000529986 RFX1P22670 979 aa8.09□□□□□ -1.11
CTNND1-223ENST00000529986 TARSP26639 723 aaKnown RBP8.09□□□□□ -1.11
CTNND1-223ENST00000529986 TXNRD1Q16881 649 aa8.09□□□□□ -1.11
CTNND1-223ENST00000529986 Q3C1V9 767 aa8.09□□□□□ -1.11
CTNND1-223ENST00000529986 KIAA1755Q5JYT7 1200 aa8.09□□□□□ -1.11
CTNND1-223ENST00000529986 GPATCH4Q5T3I0 446 aaKnown RBP8.09□□□□□ -1.11
CTNND1-223ENST00000529986 PDXDC1Q6P996 788 aa8.09□□□□□ -1.11
CTNND1-223ENST00000529986 FAM118BQ9BPY3 351 aa8.09□□□□□ -1.11
CTNND1-223ENST00000529986 WDR11Q9BZH6 1224 aa8.09□□□□□ -1.11
CTNND1-223ENST00000529986 BNIP3LO60238 219 aa8.09□□□□□ -1.11
CTNND1-223ENST00000529986 SERPINI2O75830 405 aa8.09□□□□□ -1.11
CTNND1-223ENST00000529986 MRPS35P82673 323 aaKnown RBP8.09□□□□□ -1.11
CTNND1-223ENST00000529986 ZNF579Q8NAF0 562 aaKnown RBP8.09□□□□□ -1.11
CTNND1-223ENST00000529986 NR1H4Q96RI1 486 aaPredicted RBP8.09□□□□□ -1.11
CTNND1-223ENST00000529986 CCT7Q99832 543 aa8.09□□□□□ -1.11
CTNND1-223ENST00000529986 BRIP1Q9BX63 1249 aa8.09□□□□□ -1.11
CTNND1-223ENST00000529986 CELF4Q9BZC1 486 aaKnown RBP8.09□□□□□ -1.11
CTNND1-223ENST00000529986 ZSCAN9O15535 394 aaPredicted RBP8.09□□□□□ -1.11
CTNND1-223ENST00000529986 NMT2O60551 498 aa8.09□□□□□ -1.11
CTNND1-223ENST00000529986 TRIM49P0CI25 452 aa8.09□□□□□ -1.11
CTNND1-223ENST00000529986 TRIM49CP0CI26 452 aa8.09□□□□□ -1.11
CTNND1-223ENST00000529986 SRGAP2CP0DJJ0 459 aa8.09□□□□□ -1.11
CTNND1-223ENST00000529986 MARK3P27448 753 aa8.09□□□□□ -1.11
CTNND1-223ENST00000529986 TYK2P29597 1187 aa8.09□□□□□ -1.11
CTNND1-223ENST00000529986 MECOMQ03112 1051 aa8.09□□□□□ -1.11
CTNND1-223ENST00000529986 ANO4Q32M45 955 aa8.09□□□□□ -1.11
CTNND1-223ENST00000529986 ANKRD40Q6AI12 368 aa8.09□□□□□ -1.11
CTNND1-223ENST00000529986 DDIASQ8IXT1 998 aa8.09□□□□□ -1.11
CTNND1-223ENST00000529986 NUP93Q8N1F7 819 aa8.09□□□□□ -1.11
CTNND1-223ENST00000529986 BBS5Q8N3I7 341 aa8.09□□□□□ -1.11
CTNND1-223ENST00000529986 ATP11CQ8NB49 1132 aa8.09□□□□□ -1.11
CTNND1-223ENST00000529986 RFWD2Q8NHY2 731 aa8.09□□□□□ -1.11
CTNND1-223ENST00000529986 MTBPQ96DY7 904 aa8.09□□□□□ -1.11
CTNND1-223ENST00000529986 MSTO1Q9BUK6 570 aa8.09□□□□□ -1.11
CTNND1-223ENST00000529986 CARD9Q9H257 536 aa8.09□□□□□ -1.11
CTNND1-223ENST00000529986 FHOD1Q9Y613 1164 aa8.09□□□□□ -1.11
CTNND1-223ENST00000529986 RPAP1Q9BWH6 1393 aaPredicted RBP8.08□□□□□ -1.12
CTNND1-223ENST00000529986 TMEM120BA0PK00 339 aa8.08□□□□□ -1.12
CTNND1-223ENST00000529986 FAM107AO95990 144 aa8.08□□□□□ -1.12
CTNND1-223ENST00000529986 IL10P22301 178 aa8.08□□□□□ -1.12
CTNND1-223ENST00000529986 PPP4R4Q6NUP7 873 aa8.08□□□□□ -1.12
CTNND1-223ENST00000529986 C1orf228Q6PIY5 440 aa8.08□□□□□ -1.12
CTNND1-223ENST00000529986 SIX6OS1Q8N1H7 587 aa8.08□□□□□ -1.12
CTNND1-223ENST00000529986 CNBD2Q96M20 576 aa8.08□□□□□ -1.12
CTNND1-223ENST00000529986 PITPNM2Q9BZ72 1349 aa8.08□□□□□ -1.12
CTNND1-223ENST00000529986 TULP4Q9NRJ4 1543 aa8.08□□□□□ -1.12
CTNND1-223ENST00000529986 POTEB3A0JP26 581 aa8.08□□□□□ -1.12
CTNND1-223ENST00000529986 POTECB2RU33 542 aa8.08□□□□□ -1.12
CTNND1-223ENST00000529986 H0Y626 953 aa8.08□□□□□ -1.12
CTNND1-223ENST00000529986 AIM2O14862 343 aa8.08□□□□□ -1.12
CTNND1-223ENST00000529986 DGKIO75912 1065 aa8.08□□□□□ -1.12
CTNND1-223ENST00000529986 TRIM16O95361 564 aa8.08□□□□□ -1.12
CTNND1-223ENST00000529986 GNAT1P11488 350 aa8.08□□□□□ -1.12
CTNND1-223ENST00000529986 VCPP55072 806 aaKnown RBP8.08□□□□□ -1.12
CTNND1-223ENST00000529986 POTEBQ6S5H4 581 aa8.08□□□□□ -1.12
CTNND1-223ENST00000529986 RASGRP2Q7LDG7 609 aa8.08□□□□□ -1.12
CTNND1-223ENST00000529986 CDR2LQ86X02 465 aaPredicted RBP8.08□□□□□ -1.12
CTNND1-223ENST00000529986 TAGAPQ8N103 731 aa8.08□□□□□ -1.12
CTNND1-223ENST00000529986 TC2NQ8N9U0 490 aa8.08□□□□□ -1.12
CTNND1-223ENST00000529986 RAD54LQ92698 747 aa8.08□□□□□ -1.12
CTNND1-223ENST00000529986 SHCBP1LQ9BZQ2 653 aa8.08□□□□□ -1.12
CTNND1-223ENST00000529986 INTS2Q9H0H0 1204 aaKnown RBP8.08□□□□□ -1.12
CTNND1-223ENST00000529986 ZCWPW1Q9H0M4 648 aa8.08□□□□□ -1.12
CTNND1-223ENST00000529986 GOLPH3Q9H4A6 298 aa8.08□□□□□ -1.12
CTNND1-223ENST00000529986 FAM96AQ9H5X1 160 aa8.08□□□□□ -1.12
CTNND1-223ENST00000529986 SARS2Q9NP81 518 aaKnown RBP8.08□□□□□ -1.12
CTNND1-223ENST00000529986 TMEM260Q9NX78 707 aa8.08□□□□□ -1.12
CTNND1-223ENST00000529986 SLC13A4Q9UKG4 626 aa8.08□□□□□ -1.12
CTNND1-223ENST00000529986 ZNF804BA4D1E1 1349 aa8.08□□□□□ -1.12
CTNND1-223ENST00000529986 APBA3O96018 575 aa8.08□□□□□ -1.12
CTNND1-223ENST00000529986 MRPL28Q13084 256 aaKnown RBP8.08□□□□□ -1.12
Retrieved 100 of 20,778 RNA–protein pairs in 14.4 ms