RNA–Protein interactions for RNA: ENST00000528062.7

RBM39-243, Transcript of RNA binding motif protein 39, humanhuman

TSL 1 (best) BASIC

Gene RBM39, Length 2,421 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RBM39-243ENST00000528062 DDX47Q9H0S4 455 aaKnown RBP14.1□□□□□ -0.15
RBM39-243ENST00000528062 SIX2Q9NPC8 291 aa14.1□□□□□ -0.15
RBM39-243ENST00000528062 ARMCX3Q9UH62 379 aaPredicted RBP14.1□□□□□ -0.15
RBM39-243ENST00000528062 TRAF3IP3Q9Y228 551 aa14.1□□□□□ -0.15
RBM39-243ENST00000528062 HMGB1P1B2RPK0 211 aaPredicted RBP14.1□□□□□ -0.15
RBM39-243ENST00000528062 SART1O43290 800 aaKnown RBP14.1□□□□□ -0.15
RBM39-243ENST00000528062 AFPP02771 609 aaKnown RBP14.1□□□□□ -0.15
RBM39-243ENST00000528062 EIF2AK2P19525 551 aaKnown RBP14.1□□□□□ -0.15
RBM39-243ENST00000528062 HPDP32754 393 aaPredicted RBP14.1□□□□□ -0.15
RBM39-243ENST00000528062 FNTAP49354 379 aa14.1□□□□□ -0.15
RBM39-243ENST00000528062 GTF2A1P52655 376 aaPredicted RBP14.1□□□□□ -0.15
RBM39-243ENST00000528062 EPHA7Q15375 998 aa14.1□□□□□ -0.15
RBM39-243ENST00000528062 EXOC3L4Q17RC7 722 aa14.1□□□□□ -0.15
RBM39-243ENST00000528062 EPM2AIP1Q7L775 607 aaPredicted RBP14.1□□□□□ -0.15
RBM39-243ENST00000528062 FRMD5Q7Z6J6 570 aa14.1□□□□□ -0.15
RBM39-243ENST00000528062 SUGP1Q8IWZ8 645 aaKnown RBP14.1□□□□□ -0.15
RBM39-243ENST00000528062 MYCBPAPQ8TBZ2 947 aa14.1□□□□□ -0.15
RBM39-243ENST00000528062 RMDN3Q96TC7 470 aa14.1□□□□□ -0.15
RBM39-243ENST00000528062 REEP2Q9BRK0 252 aa14.1□□□□□ -0.15
RBM39-243ENST00000528062 NOC2LQ9Y3T9 749 aaKnown RBP14.1□□□□□ -0.15
RBM39-243ENST00000528062 SLC15A5A6NIM6 579 aa14.09□□□□□ -0.15
RBM39-243ENST00000528062 SPDYE3A6NKU9 549 aa14.09□□□□□ -0.15
RBM39-243ENST00000528062 MEFVO15553 781 aaPredicted RBP14.09□□□□□ -0.15
RBM39-243ENST00000528062 IGHA2P01877 340 aa14.09□□□□□ -0.15
RBM39-243ENST00000528062 SPATA31C1P0DKV0 1188 aa14.09□□□□□ -0.15
RBM39-243ENST00000528062 HNRNPH1P31943 449 aaKnown RBP14.09□□□□□ -0.15
RBM39-243ENST00000528062 CASP4P49662 377 aa14.09□□□□□ -0.15
RBM39-243ENST00000528062 ALDH5A1P51649 535 aaPredicted RBP14.09□□□□□ -0.15
RBM39-243ENST00000528062 MRPS9P82933 396 aaKnown RBP14.09□□□□□ -0.15
RBM39-243ENST00000528062 ZNF844Q08AG5 666 aa14.09□□□□□ -0.15
RBM39-243ENST00000528062 PGM5Q15124 567 aa14.09□□□□□ -0.15
RBM39-243ENST00000528062 KNOP1Q1ED39 458 aaKnown RBP14.09□□□□□ -0.15
RBM39-243ENST00000528062 DCAF17Q5H9S7 520 aaPredicted RBP14.09□□□□□ -0.15
RBM39-243ENST00000528062 C10orf76Q5T2E6 689 aa14.09□□□□□ -0.15
RBM39-243ENST00000528062 NLRP14Q86W24 1093 aa14.09□□□□□ -0.15
RBM39-243ENST00000528062 OLIG1Q8TAK6 271 aa14.09□□□□□ -0.15
RBM39-243ENST00000528062 PBKQ96KB5 322 aa14.09□□□□□ -0.15
RBM39-243ENST00000528062 MBOAT7Q96N66 472 aa14.09□□□□□ -0.15
RBM39-243ENST00000528062 CCT8L2Q96SF2 557 aa14.09□□□□□ -0.15
RBM39-243ENST00000528062 PDCD2LQ9BRP1 358 aa14.09□□□□□ -0.15
RBM39-243ENST00000528062 FLRT1Q9NZU1 646 aa14.09□□□□□ -0.15
RBM39-243ENST00000528062 IVNS1ABPQ9Y6Y0 642 aa14.09□□□□□ -0.15
RBM39-243ENST00000528062 ATXN2Q99700 1313 aaKnown RBP14.09□□□□□ -0.15
RBM39-243ENST00000528062 CYP3A7-CYP3A51PA0A087WV96 503 aa14.09□□□□□ -0.15
RBM39-243ENST00000528062 RSPH10B2B2RC85 870 aa14.09□□□□□ -0.15
RBM39-243ENST00000528062 RSPH10BP0C881 870 aa14.09□□□□□ -0.15
RBM39-243ENST00000528062 CYP3A7P24462 503 aa14.09□□□□□ -0.15
RBM39-243ENST00000528062 EDNRBP24530 442 aa14.09□□□□□ -0.15
RBM39-243ENST00000528062 PRKCIP41743 596 aa14.09□□□□□ -0.15
RBM39-243ENST00000528062 FCGRTP55899 365 aa14.09□□□□□ -0.15
RBM39-243ENST00000528062 ARHGAP4P98171 946 aa14.09□□□□□ -0.15
RBM39-243ENST00000528062 KCNA1Q09470 495 aa14.09□□□□□ -0.15
RBM39-243ENST00000528062 ETNPPLQ8TBG4 499 aa14.09□□□□□ -0.15
RBM39-243ENST00000528062 IKZF4Q9H2S9 585 aa14.09□□□□□ -0.15
RBM39-243ENST00000528062 CENPHQ9H3R5 247 aa14.09□□□□□ -0.15
RBM39-243ENST00000528062 STXBP5LQ9Y2K9 1186 aa14.09□□□□□ -0.15
RBM39-243ENST00000528062 MYO1FO00160 1098 aa14.08□□□□□ -0.16
RBM39-243ENST00000528062 PGRMC1O00264 195 aaKnown RBP14.08□□□□□ -0.16
RBM39-243ENST00000528062 DDX3XO00571 662 aaKnown RBP eCLIP14.08□□□□□ -0.161e-17■□□□□ 11
RBM39-243ENST00000528062 FKTNO75072 461 aa14.08□□□□□ -0.16
RBM39-243ENST00000528062 FOSP01100 380 aaPredicted RBP14.08□□□□□ -0.16
RBM39-243ENST00000528062 GUCY2CP25092 1073 aa14.08□□□□□ -0.16
RBM39-243ENST00000528062 JAM2P57087 298 aa14.08□□□□□ -0.16
RBM39-243ENST00000528062 PRKCZQ05513 592 aa14.08□□□□□ -0.16
RBM39-243ENST00000528062 MAP2K5Q13163 448 aa14.08□□□□□ -0.16
RBM39-243ENST00000528062 CUL1Q13616 776 aa14.08□□□□□ -0.16
RBM39-243ENST00000528062 LRIG3Q6UXM1 1119 aa14.08□□□□□ -0.16
RBM39-243ENST00000528062 SLFN11Q7Z7L1 901 aa14.08□□□□□ -0.16
RBM39-243ENST00000528062 EIF1ADQ8N9N8 165 aaKnown RBP14.08□□□□□ -0.16
RBM39-243ENST00000528062 CYP2W1Q8TAV3 490 aa14.08□□□□□ -0.16
RBM39-243ENST00000528062 MAML3Q96JK9 1138 aa14.08□□□□□ -0.16
RBM39-243ENST00000528062 BUD13Q9BRD0 619 aaKnown RBP eCLIP14.08□□□□□ -0.164e-15■■■□□ 15.3
RBM39-243ENST00000528062 BEGAINQ9BUH8 593 aa14.08□□□□□ -0.16
RBM39-243ENST00000528062 LRRC4CQ9HCJ2 640 aa14.08□□□□□ -0.16
RBM39-243ENST00000528062 AMACRQ9UHK6 382 aa14.08□□□□□ -0.16
RBM39-243ENST00000528062 BZW2Q9Y6E2 419 aaKnown RBP14.08□□□□□ -0.16
RBM39-243ENST00000528062 CAPN7Q9Y6W3 813 aa14.08□□□□□ -0.16
RBM39-243ENST00000528062 HOXC6P09630 235 aa14.07□□□□□ -0.16
RBM39-243ENST00000528062 XRCC5P13010 732 aaKnown RBP14.07□□□□□ -0.16
RBM39-243ENST00000528062 CCL14Q16627 93 aa14.07□□□□□ -0.16
RBM39-243ENST00000528062 PRR16Q569H4 304 aa14.07□□□□□ -0.16
RBM39-243ENST00000528062 CNPY4Q8N129 248 aa14.07□□□□□ -0.16
RBM39-243ENST00000528062 OTUD6BQ8N6M0 293 aa14.07□□□□□ -0.16
RBM39-243ENST00000528062 DNERQ8NFT8 737 aa14.07□□□□□ -0.16
RBM39-243ENST00000528062 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP14.07□□□□□ -0.161e-8■■■■□ 25.8
RBM39-243ENST00000528062 SLC35C1Q96A29 364 aa14.07□□□□□ -0.16
RBM39-243ENST00000528062 LENG9Q96B70 501 aa14.07□□□□□ -0.16
RBM39-243ENST00000528062 CALR3Q96L12 384 aaKnown RBP14.07□□□□□ -0.16
RBM39-243ENST00000528062 SLC12A6Q9UHW9 1150 aa14.07□□□□□ -0.16
RBM39-243ENST00000528062 TMCO5BA8MYB1 307 aa14.07□□□□□ -0.16
RBM39-243ENST00000528062 FAM86B1E9PN63 330 aa14.07□□□□□ -0.16
RBM39-243ENST00000528062 KRIT1O00522 736 aa14.07□□□□□ -0.16
RBM39-243ENST00000528062 DAPK3O43293 454 aa14.07□□□□□ -0.16
RBM39-243ENST00000528062 RGS20O76081 388 aa14.07□□□□□ -0.16
RBM39-243ENST00000528062 FAM86B2P0C5J1 330 aa14.07□□□□□ -0.16
RBM39-243ENST00000528062 HSPA8P11142 646 aaKnown RBP14.07□□□□□ -0.16
RBM39-243ENST00000528062 SYT2Q8N9I0 419 aaPredicted RBP14.07□□□□□ -0.16
RBM39-243ENST00000528062 FBXL5Q9UKA1 691 aa14.07□□□□□ -0.16
RBM39-243ENST00000528062 IGLV3-22A0A075B6J6 115 aa14.06□□□□□ -0.16
RBM39-243ENST00000528062 NR3C1P04150 777 aa14.06□□□□□ -0.16
Retrieved 100 of 20,778 RNA–protein pairs in 46.2 ms