RNA–Protein interactions for RNA: ENST00000527619.5

SOX6-208, Transcript of SRY-box 6, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SOX6, Length 2,699 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SOX6-208ENST00000527619 SHROOM1Q2M3G4 852 aaPredicted RBP8.02□□□□□ -1.13
SOX6-208ENST00000527619 WASHC2DQ5SRD0 308 aa8.02□□□□□ -1.13
SOX6-208ENST00000527619 RNF43Q68DV7 783 aa8.02□□□□□ -1.13
SOX6-208ENST00000527619 IFNL3Q8IZI9 196 aa8.02□□□□□ -1.13
SOX6-208ENST00000527619 ARHGAP18Q8N392 663 aa8.02□□□□□ -1.13
SOX6-208ENST00000527619 RASGEF1CQ8N431 466 aa8.02□□□□□ -1.13
SOX6-208ENST00000527619 UCMAQ8WVF2 138 aa8.02□□□□□ -1.13
SOX6-208ENST00000527619 ZNF333Q96JL9 665 aa8.02□□□□□ -1.13
SOX6-208ENST00000527619 CEP63Q96MT8 703 aa8.02□□□□□ -1.13
SOX6-208ENST00000527619 STRBPQ96SI9 672 aaKnown RBP8.02□□□□□ -1.13
SOX6-208ENST00000527619 CELF4Q9BZC1 486 aaKnown RBP8.02□□□□□ -1.13
SOX6-208ENST00000527619 LRMDAQ9H2I8 198 aa8.02□□□□□ -1.13
SOX6-208ENST00000527619 EPB41L4AQ9HCS5 686 aaPredicted RBP8.02□□□□□ -1.13
SOX6-208ENST00000527619 SEPT10Q9P0V9 454 aa8.02□□□□□ -1.13
SOX6-208ENST00000527619 DAAM1Q9Y4D1 1078 aa8.02□□□□□ -1.13
SOX6-208ENST00000527619 SCINQ9Y6U3 715 aa8.02□□□□□ -1.13
SOX6-208ENST00000527619 TJP1Q07157 1748 aa8.01□□□□□ -1.13
SOX6-208ENST00000527619 MROH7Q68CQ1 1323 aa8.01□□□□□ -1.13
SOX6-208ENST00000527619 AKAP11Q9UKA4 1901 aa8.01□□□□□ -1.13
SOX6-208ENST00000527619 hCG_1642624A0A1W2PR95 340 aa8.01□□□□□ -1.13
SOX6-208ENST00000527619 NVLO15381 856 aaKnown RBP8.01□□□□□ -1.13
SOX6-208ENST00000527619 FOXD2O60548 495 aaPredicted RBP8.01□□□□□ -1.13
SOX6-208ENST00000527619 ITGA4P13612 1032 aa8.01□□□□□ -1.13
SOX6-208ENST00000527619 RXRBP28702 533 aa8.01□□□□□ -1.13
SOX6-208ENST00000527619 GSTT1P30711 240 aa8.01□□□□□ -1.13
SOX6-208ENST00000527619 MCAMP43121 646 aa8.01□□□□□ -1.13
SOX6-208ENST00000527619 NLRP5P59047 1200 aa8.01□□□□□ -1.13
SOX6-208ENST00000527619 PLOD1Q02809 727 aaPredicted RBP8.01□□□□□ -1.13
SOX6-208ENST00000527619 SLC39A6Q13433 755 aa8.01□□□□□ -1.13
SOX6-208ENST00000527619 SEPT7Q16181 437 aaKnown RBP8.01□□□□□ -1.13
SOX6-208ENST00000527619 BTNL9Q6UXG8 535 aa8.01□□□□□ -1.13
SOX6-208ENST00000527619 PIK3AP1Q6ZUJ8 805 aa8.01□□□□□ -1.13
SOX6-208ENST00000527619 ZNF467Q7Z7K2 595 aaPredicted RBP8.01□□□□□ -1.13
SOX6-208ENST00000527619 RELL1Q8IUW5 271 aa8.01□□□□□ -1.13
SOX6-208ENST00000527619 PLBD2Q8NHP8 589 aa8.01□□□□□ -1.13
SOX6-208ENST00000527619 CFAP61Q8NHU2 1237 aa8.01□□□□□ -1.13
SOX6-208ENST00000527619 GDAP1Q8TB36 358 aa8.01□□□□□ -1.13
SOX6-208ENST00000527619 PTPRN2Q92932 1015 aa8.01□□□□□ -1.13
SOX6-208ENST00000527619 AZIN2Q96A70 460 aa8.01□□□□□ -1.13
SOX6-208ENST00000527619 GPR101Q96P66 508 aaPredicted RBP8.01□□□□□ -1.13
SOX6-208ENST00000527619 GBP5Q96PP8 586 aa8.01□□□□□ -1.13
SOX6-208ENST00000527619 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP8.01□□□□□ -1.13
SOX6-208ENST00000527619 DDX23Q9BUQ8 820 aaKnown RBP8.01□□□□□ -1.13
SOX6-208ENST00000527619 TMEM109Q9BVC6 243 aa8.01□□□□□ -1.13
SOX6-208ENST00000527619 PACSIN1Q9BY11 444 aa8.01□□□□□ -1.13
SOX6-208ENST00000527619 MAGEF1Q9HAY2 307 aa8.01□□□□□ -1.13
SOX6-208ENST00000527619 DCAF16Q9NXF7 216 aa8.01□□□□□ -1.13
SOX6-208ENST00000527619 CEP72Q9P209 647 aa8.01□□□□□ -1.13
SOX6-208ENST00000527619 KLHL14Q9P2G3 628 aa8.01□□□□□ -1.13
SOX6-208ENST00000527619 CNOT7Q9UIV1 285 aaKnown RBP8.01□□□□□ -1.13
SOX6-208ENST00000527619 SLC4A7Q9Y6M7 1214 aa8.01□□□□□ -1.13
SOX6-208ENST00000527619 MYPNQ86TC9 1320 aa8.01□□□□□ -1.13
SOX6-208ENST00000527619 TLR2O60603 784 aa8.01□□□□□ -1.13
SOX6-208ENST00000527619 AFPP02771 609 aaKnown RBP8.01□□□□□ -1.13
SOX6-208ENST00000527619 ZBTB48P10074 688 aaPredicted RBP8.01□□□□□ -1.13
SOX6-208ENST00000527619 SKIP12755 728 aa8.01□□□□□ -1.13
SOX6-208ENST00000527619 CCNCP24863 283 aa8.01□□□□□ -1.13
SOX6-208ENST00000527619 VHLP40337 213 aa8.01□□□□□ -1.13
SOX6-208ENST00000527619 CACNA2D1P54289 1103 aa8.01□□□□□ -1.13
SOX6-208ENST00000527619 STK4Q13043 487 aa8.01□□□□□ -1.13
SOX6-208ENST00000527619 BOLA3Q53S33 107 aa8.01□□□□□ -1.13
SOX6-208ENST00000527619 TNFAIP8L3Q5GJ75 292 aa8.01□□□□□ -1.13
SOX6-208ENST00000527619 NDUFAF2Q8N183 169 aa8.01□□□□□ -1.13
SOX6-208ENST00000527619 METTL13Q8N6R0 699 aa8.01□□□□□ -1.13
SOX6-208ENST00000527619 C4orf32Q8N8J7 132 aa8.01□□□□□ -1.13
SOX6-208ENST00000527619 FAM13CQ8NE31 585 aa8.01□□□□□ -1.13
SOX6-208ENST00000527619 GSDMBQ8TAX9 411 aa8.01□□□□□ -1.13
SOX6-208ENST00000527619 TMEM237Q96Q45 408 aa8.01□□□□□ -1.13
SOX6-208ENST00000527619 SRPK1Q96SB4 655 aaKnown RBP8.01□□□□□ -1.13
SOX6-208ENST00000527619 TRIM51Q9BSJ1 452 aa8.01□□□□□ -1.13
SOX6-208ENST00000527619 TRIM31Q9BZY9 425 aa8.01□□□□□ -1.13
SOX6-208ENST00000527619 CCDC113Q9H0I3 377 aa8.01□□□□□ -1.13
SOX6-208ENST00000527619 OCEL1Q9H607 264 aa8.01□□□□□ -1.13
SOX6-208ENST00000527619 CDKN2AIPQ9NXV6 580 aaPredicted RBP8.01□□□□□ -1.13
SOX6-208ENST00000527619 PDP2Q9P2J9 529 aa8.01□□□□□ -1.13
SOX6-208ENST00000527619 PRKAG2Q9UGJ0 569 aa8.01□□□□□ -1.13
SOX6-208ENST00000527619 V9GY48 417 aaPredicted RBP8.01□□□□□ -1.13
SOX6-208ENST00000527619 KIF1AQ12756 1690 aa8.01□□□□□ -1.13
SOX6-208ENST00000527619 NHSL1Q5SYE7 1610 aa8□□□□□ -1.13
SOX6-208ENST00000527619 POTEFA5A3E0 1075 aa8□□□□□ -1.13
SOX6-208ENST00000527619 MAGEA13PA6NCF6 341 aa8□□□□□ -1.13
SOX6-208ENST00000527619 TEX28O15482 410 aa8□□□□□ -1.13
SOX6-208ENST00000527619 IDH1O75874 414 aaKnown RBP8□□□□□ -1.13
SOX6-208ENST00000527619 HNRNPCP07910 306 aaKnown RBP eCLIP8□□□□□ -1.13
SOX6-208ENST00000527619 POTEIP0CG38 1075 aa8□□□□□ -1.13
SOX6-208ENST00000527619 GM2AP17900 193 aa8□□□□□ -1.13
SOX6-208ENST00000527619 KCNA3P22001 575 aa8□□□□□ -1.13
SOX6-208ENST00000527619 S100A5P33763 92 aa8□□□□□ -1.13
SOX6-208ENST00000527619 AMPD3Q01432 767 aa8□□□□□ -1.13
SOX6-208ENST00000527619 GSTM4Q03013 218 aa8□□□□□ -1.13
SOX6-208ENST00000527619 FUT2Q10981 343 aa8□□□□□ -1.13
SOX6-208ENST00000527619 COX10Q12887 443 aa8□□□□□ -1.13
SOX6-208ENST00000527619 ACVR2BQ13705 512 aa8□□□□□ -1.13
SOX6-208ENST00000527619 RCN2Q14257 317 aa8□□□□□ -1.13
SOX6-208ENST00000527619 SLC29A2Q14542 456 aa8□□□□□ -1.13
SOX6-208ENST00000527619 AMHR2Q16671 573 aa8□□□□□ -1.13
SOX6-208ENST00000527619 SLC44A4Q53GD3 710 aa8□□□□□ -1.13
SOX6-208ENST00000527619 SLC2A7Q6PXP3 512 aa8□□□□□ -1.13
SOX6-208ENST00000527619 SYT2Q8N9I0 419 aaPredicted RBP8□□□□□ -1.13
SOX6-208ENST00000527619 MTMR14Q8NCE2 650 aa8□□□□□ -1.13
Retrieved 100 of 20,778 RNA–protein pairs in 40.4 ms