RNA–Protein interactions for RNA: ENST00000526313.5

USH1C-204, Transcript of USH1 protein network component harmonin, humanhuman

TSL 1 (best)

Gene USH1C, Length 2,149 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USH1C-204ENST00000526313 CYP24A1Q07973 514 aa17.26■□□□□ 0.35
USH1C-204ENST00000526313 ARHGAP44Q17R89 818 aa17.26■□□□□ 0.35
USH1C-204ENST00000526313 GPAT2Q6NUI2 795 aa17.26■□□□□ 0.35
USH1C-204ENST00000526313 GLYCTKQ8IVS8 523 aa17.26■□□□□ 0.35
USH1C-204ENST00000526313 NCANO14594 1321 aa17.25■□□□□ 0.35
USH1C-204ENST00000526313 FTCDO95954 541 aa17.25■□□□□ 0.35
USH1C-204ENST00000526313 ZBTB48P10074 688 aaPredicted RBP17.25■□□□□ 0.35
USH1C-204ENST00000526313 CXCR5P32302 372 aa17.25■□□□□ 0.35
USH1C-204ENST00000526313 POLGP54098 1239 aaPredicted RBP17.25■□□□□ 0.35
USH1C-204ENST00000526313 CLDN10P78369 228 aa17.25■□□□□ 0.35
USH1C-204ENST00000526313 C2orf54Q08AI8 447 aa17.25■□□□□ 0.35
USH1C-204ENST00000526313 LDLRAD1Q5T700 205 aa17.25■□□□□ 0.35
USH1C-204ENST00000526313 METTL7BQ6UX53 244 aa17.25■□□□□ 0.35
USH1C-204ENST00000526313 FASTKD5Q7L8L6 764 aaKnown RBP17.25■□□□□ 0.35
USH1C-204ENST00000526313 GPD1LQ8N335 351 aa17.25■□□□□ 0.35
USH1C-204ENST00000526313 POMGNT1Q8WZA1 660 aa17.25■□□□□ 0.35
USH1C-204ENST00000526313 RUBCNQ92622 972 aa17.25■□□□□ 0.35
USH1C-204ENST00000526313 SEMA4DQ92854 862 aa17.25■□□□□ 0.35
USH1C-204ENST00000526313 PAGR1Q9BTK6 254 aa17.25■□□□□ 0.35
USH1C-204ENST00000526313 SIP14410 1827 aa17.25■□□□□ 0.35
USH1C-204ENST00000526313 TMEM253P0C7T8 217 aa17.24■□□□□ 0.35
USH1C-204ENST00000526313 GLRA2P23416 452 aa17.24■□□□□ 0.35
USH1C-204ENST00000526313 RFC5P40937 340 aa17.24■□□□□ 0.35
USH1C-204ENST00000526313 NAMPTP43490 491 aa17.24■□□□□ 0.35
USH1C-204ENST00000526313 Q3C1V9 767 aa17.24■□□□□ 0.35
USH1C-204ENST00000526313 CFAP221Q4G0U5 840 aa17.24■□□□□ 0.35
USH1C-204ENST00000526313 DNAAF5Q86Y56 855 aa17.24■□□□□ 0.35
USH1C-204ENST00000526313 FAM71AQ8IYT1 594 aa17.24■□□□□ 0.35
USH1C-204ENST00000526313 MORC4Q8TE76 937 aa17.24■□□□□ 0.35
USH1C-204ENST00000526313 AGPAT1Q99943 283 aa17.24■□□□□ 0.35
USH1C-204ENST00000526313 KIAA1586Q9HCI6 787 aa17.24■□□□□ 0.35
USH1C-204ENST00000526313 STXBP5LQ9Y2K9 1186 aa17.24■□□□□ 0.35
USH1C-204ENST00000526313 PPME1Q9Y570 386 aa17.24■□□□□ 0.35
USH1C-204ENST00000526313 HNRNPDLO14979 420 aaKnown RBP17.24■□□□□ 0.35
USH1C-204ENST00000526313 KIAA0391O15091 583 aaKnown RBP17.24■□□□□ 0.35
USH1C-204ENST00000526313 PAFAH1B1P43034 410 aa17.24■□□□□ 0.35
USH1C-204ENST00000526313 KCNV1Q6PIU1 500 aa17.24■□□□□ 0.35
USH1C-204ENST00000526313 C15orf39Q6ZRI6 1047 aa17.24■□□□□ 0.35
USH1C-204ENST00000526313 USP37Q86T82 979 aa17.24■□□□□ 0.35
USH1C-204ENST00000526313 ASAP3Q8TDY4 903 aa17.24■□□□□ 0.35
USH1C-204ENST00000526313 LMBR1Q8WVP7 490 aa17.24■□□□□ 0.35
USH1C-204ENST00000526313 SEPT1Q8WYJ6 367 aa17.24■□□□□ 0.35
USH1C-204ENST00000526313 OPTNQ96CV9 577 aa17.24■□□□□ 0.35
USH1C-204ENST00000526313 KREMEN1Q96MU8 473 aa17.24■□□□□ 0.35
USH1C-204ENST00000526313 NRBP2Q9NSY0 501 aa17.24■□□□□ 0.35
USH1C-204ENST00000526313 EXTL3O43909 919 aa17.23■□□□□ 0.35
USH1C-204ENST00000526313 TNFAIP3P21580 790 aa17.23■□□□□ 0.35
USH1C-204ENST00000526313 STAT5BP51692 787 aa17.23■□□□□ 0.35
USH1C-204ENST00000526313 MAP2K1Q02750 393 aaPredicted RBP17.23■□□□□ 0.35
USH1C-204ENST00000526313 TCEAL1Q15170 157 aa17.23■□□□□ 0.35
USH1C-204ENST00000526313 HDXQ7Z353 690 aa17.23■□□□□ 0.35
USH1C-204ENST00000526313 SHC3Q92529 594 aa17.23■□□□□ 0.35
USH1C-204ENST00000526313 TMEM143Q96AN5 459 aa17.23■□□□□ 0.35
USH1C-204ENST00000526313 PSMB7Q99436 277 aa17.23■□□□□ 0.35
USH1C-204ENST00000526313 LOC102724159A0A0B4J2E5 919 aa17.23■□□□□ 0.35
USH1C-204ENST00000526313 LGR5O75473 907 aa17.23■□□□□ 0.35
USH1C-204ENST00000526313 KIF4AO95239 1232 aa17.23■□□□□ 0.35
USH1C-204ENST00000526313 OSBPP22059 807 aa17.23■□□□□ 0.35
USH1C-204ENST00000526313 PRPF4BQ13523 1007 aaKnown RBP17.23■□□□□ 0.35
USH1C-204ENST00000526313 PWP2Q15269 919 aaKnown RBP17.23■□□□□ 0.35
USH1C-204ENST00000526313 CCDC181Q5TID7 509 aa17.23■□□□□ 0.35
USH1C-204ENST00000526313 FAM160B1Q5W0V3 765 aa17.23■□□□□ 0.35
USH1C-204ENST00000526313 HELQQ8TDG4 1101 aa17.23■□□□□ 0.35
USH1C-204ENST00000526313 CCDC127Q96BQ5 260 aa17.23■□□□□ 0.35
USH1C-204ENST00000526313 MPHOSPH6Q99547 160 aaKnown RBP17.23■□□□□ 0.35
USH1C-204ENST00000526313 POP1Q99575 1024 aaKnown RBP17.23■□□□□ 0.35
USH1C-204ENST00000526313 ISCUQ9H1K1 167 aa17.23■□□□□ 0.35
USH1C-204ENST00000526313 TMEM134Q9H6X4 195 aa17.23■□□□□ 0.35
USH1C-204ENST00000526313 MAFO75444 373 aaPredicted RBP17.22■□□□□ 0.35
USH1C-204ENST00000526313 GGPS1O95749 300 aa17.22■□□□□ 0.35
USH1C-204ENST00000526313 NOP2P46087 812 aaKnown RBP17.22■□□□□ 0.35
USH1C-204ENST00000526313 RPS6KA1Q15418 735 aa17.22■□□□□ 0.35
USH1C-204ENST00000526313 CCNI2Q6ZMN8 369 aaPredicted RBP17.22■□□□□ 0.35
USH1C-204ENST00000526313 SV2AQ7L0J3 742 aa17.22■□□□□ 0.35
USH1C-204ENST00000526313 ARMC9Q7Z3E5 817 aa17.22■□□□□ 0.35
USH1C-204ENST00000526313 PALB2Q86YC2 1186 aa17.22■□□□□ 0.35
USH1C-204ENST00000526313 FBXL13Q8NEE6 735 aa17.22■□□□□ 0.35
USH1C-204ENST00000526313 PSPC1Q8WXF1 523 aaKnown RBP17.22■□□□□ 0.35
USH1C-204ENST00000526313 SLC7A3Q8WY07 619 aa17.22■□□□□ 0.35
USH1C-204ENST00000526313 RFFLQ8WZ73 363 aa17.22■□□□□ 0.35
USH1C-204ENST00000526313 KAT5Q92993 513 aa17.22■□□□□ 0.35
USH1C-204ENST00000526313 MS4A14Q96JA4 679 aa17.22■□□□□ 0.35
USH1C-204ENST00000526313 MROH8Q9H579 483 aa17.22■□□□□ 0.35
USH1C-204ENST00000526313 RAB20Q9NX57 234 aa17.22■□□□□ 0.35
USH1C-204ENST00000526313 SMARCAL1Q9NZC9 954 aa17.22■□□□□ 0.35
USH1C-204ENST00000526313 EHD2Q9NZN4 543 aa17.22■□□□□ 0.35
USH1C-204ENST00000526313 ANKRD62A6NC57 917 aa17.21■□□□□ 0.35
USH1C-204ENST00000526313 ZNF233A6NK53 670 aa17.21■□□□□ 0.35
USH1C-204ENST00000526313 ARIH2O95376 493 aa17.21■□□□□ 0.35
USH1C-204ENST00000526313 GJA5P36382 358 aa17.21■□□□□ 0.35
USH1C-204ENST00000526313 MFAP3P55082 362 aa17.21■□□□□ 0.35
USH1C-204ENST00000526313 HADHBP55084 474 aaKnown RBP17.21■□□□□ 0.35
USH1C-204ENST00000526313 TTLL12Q14166 644 aaPredicted RBP17.21■□□□□ 0.35
USH1C-204ENST00000526313 TAS1R2Q8TE23 839 aa17.21■□□□□ 0.35
USH1C-204ENST00000526313 PBKQ96KB5 322 aa17.21■□□□□ 0.35
USH1C-204ENST00000526313 SUCLA2Q9P2R7 463 aaPredicted RBP17.21■□□□□ 0.35
USH1C-204ENST00000526313 TMEM59LQ9UK28 342 aa17.21■□□□□ 0.35
USH1C-204ENST00000526313 NOCTQ9UK39 431 aaKnown RBP17.21■□□□□ 0.35
USH1C-204ENST00000526313 TCF7P36402 384 aaPredicted RBP17.21■□□□□ 0.35
USH1C-204ENST00000526313 LIG4P49917 911 aa17.21■□□□□ 0.35
Retrieved 100 of 20,778 RNA–protein pairs in 21.1 ms