RNA–Protein interactions for RNA: ENST00000524773.5

CAPN1-202, Transcript of calpain 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CAPN1, Length 2,960 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN1-202ENST00000524773 CHRNB2P17787 502 aa14.16□□□□□ -0.14
CAPN1-202ENST00000524773 RPL13P26373 211 aaKnown RBP14.16□□□□□ -0.14
CAPN1-202ENST00000524773 SHMT1P34896 483 aa14.16□□□□□ -0.14
CAPN1-202ENST00000524773 ZNF76P36508 570 aa14.16□□□□□ -0.14
CAPN1-202ENST00000524773 MGAT5Q09328 741 aa14.16□□□□□ -0.14
CAPN1-202ENST00000524773 BZW1Q7L1Q6 419 aaKnown RBP14.16□□□□□ -0.14
CAPN1-202ENST00000524773 BORCS6Q96GS4 357 aa14.16□□□□□ -0.14
CAPN1-202ENST00000524773 TRIM6Q9C030 488 aaPredicted RBP14.16□□□□□ -0.14
CAPN1-202ENST00000524773 DDX39AO00148 427 aaKnown RBP14.16□□□□□ -0.14
CAPN1-202ENST00000524773 PIAS1O75925 651 aa14.16□□□□□ -0.14
CAPN1-202ENST00000524773 PSMC2P35998 433 aaKnown RBP14.16□□□□□ -0.14
CAPN1-202ENST00000524773 TRAPPC3LQ5T215 181 aa14.16□□□□□ -0.14
CAPN1-202ENST00000524773 C6orf118Q5T5N4 469 aa14.16□□□□□ -0.14
CAPN1-202ENST00000524773 VSTM1Q6UX27 236 aa14.16□□□□□ -0.14
CAPN1-202ENST00000524773 FAM196AQ6ZSG2 479 aa14.16□□□□□ -0.14
CAPN1-202ENST00000524773 CENPTQ96BT3 561 aa14.16□□□□□ -0.14
CAPN1-202ENST00000524773 DYDC2Q96IM9 177 aa14.16□□□□□ -0.14
CAPN1-202ENST00000524773 WRAP73Q9P2S5 460 aaPredicted RBP14.16□□□□□ -0.14
CAPN1-202ENST00000524773 SERPINB13Q9UIV8 391 aa14.16□□□□□ -0.14
CAPN1-202ENST00000524773 USP15Q9Y4E8 981 aaPredicted RBP14.16□□□□□ -0.14
CAPN1-202ENST00000524773 PCDHA3Q9Y5H8 950 aa14.16□□□□□ -0.14
CAPN1-202ENST00000524773 SPOPO43791 374 aa14.16□□□□□ -0.14
CAPN1-202ENST00000524773 RPA1P27694 616 aa14.16□□□□□ -0.14
CAPN1-202ENST00000524773 SMARCA1P28370 1054 aa14.16□□□□□ -0.14
CAPN1-202ENST00000524773 SSTR3P32745 418 aaPredicted RBP14.16□□□□□ -0.14
CAPN1-202ENST00000524773 MYL7Q01449 175 aa14.16□□□□□ -0.14
CAPN1-202ENST00000524773 GRAPQ13588 217 aa14.16□□□□□ -0.14
CAPN1-202ENST00000524773 FAM182AQ5T1J6 154 aa14.16□□□□□ -0.14
CAPN1-202ENST00000524773 GRAPLQ8TC17 118 aaPredicted RBP14.16□□□□□ -0.14
CAPN1-202ENST00000524773 AGPAT1Q99943 283 aa14.16□□□□□ -0.14
CAPN1-202ENST00000524773 KIF9Q9HAQ2 790 aa14.16□□□□□ -0.14
CAPN1-202ENST00000524773 AAASQ9NRG9 546 aa14.16□□□□□ -0.14
CAPN1-202ENST00000524773 NKX1-2Q9UD57 310 aaPredicted RBP14.16□□□□□ -0.14
CAPN1-202ENST00000524773 ZMYND8Q9ULU4 1186 aaPredicted RBP14.16□□□□□ -0.14
CAPN1-202ENST00000524773 EXOC3O60645 756 aa14.15□□□□□ -0.14
CAPN1-202ENST00000524773 GDF11O95390 407 aa14.15□□□□□ -0.14
CAPN1-202ENST00000524773 EEF2P13639 858 aaKnown RBP14.15□□□□□ -0.14
CAPN1-202ENST00000524773 GCKP35557 465 aa14.15□□□□□ -0.14
CAPN1-202ENST00000524773 ITIH4Q14624 930 aa14.15□□□□□ -0.14
CAPN1-202ENST00000524773 CGB2Q6NT52 195 aa14.15□□□□□ -0.14
CAPN1-202ENST00000524773 SRRM1Q8IYB3 904 aaKnown RBP14.15□□□□□ -0.14
CAPN1-202ENST00000524773 L3MBTL3Q96JM7 780 aaPredicted RBP14.15□□□□□ -0.14
CAPN1-202ENST00000524773 HERPUD2Q9BSE4 406 aa14.15□□□□□ -0.14
CAPN1-202ENST00000524773 SYT11Q9BT88 431 aa14.15□□□□□ -0.14
CAPN1-202ENST00000524773 APEX2Q9UBZ4 518 aa14.15□□□□□ -0.14
CAPN1-202ENST00000524773 ASIC3Q9UHC3 531 aa14.15□□□□□ -0.14
CAPN1-202ENST00000524773 RASAL2Q9UJF2 1139 aa14.15□□□□□ -0.14
CAPN1-202ENST00000524773 NCANO14594 1321 aa14.15□□□□□ -0.14
CAPN1-202ENST00000524773 PITPNM2Q9BZ72 1349 aa14.15□□□□□ -0.14
CAPN1-202ENST00000524773 TAF1LQ8IZX4 1826 aa14.15□□□□□ -0.14
CAPN1-202ENST00000524773 GOLGA8IPA6NC78 632 aa14.15□□□□□ -0.14
CAPN1-202ENST00000524773 GOLGA8JA6NMD2 632 aa14.15□□□□□ -0.14
CAPN1-202ENST00000524773 H0Y3Z8 333 aa14.15□□□□□ -0.14
CAPN1-202ENST00000524773 SPAG7O75391 227 aa14.15□□□□□ -0.14
CAPN1-202ENST00000524773 AGTP01019 485 aa14.15□□□□□ -0.14
CAPN1-202ENST00000524773 GABPAQ06546 454 aa14.15□□□□□ -0.14
CAPN1-202ENST00000524773 CRYMQ14894 314 aa14.15□□□□□ -0.14
CAPN1-202ENST00000524773 DOK7Q18PE1 504 aa14.15□□□□□ -0.14
CAPN1-202ENST00000524773 ANKLE1Q8NAG6 615 aa14.15□□□□□ -0.14
CAPN1-202ENST00000524773 ZSWIM1Q9BR11 485 aa14.15□□□□□ -0.14
CAPN1-202ENST00000524773 HEMGNQ9BXL5 484 aa14.15□□□□□ -0.14
CAPN1-202ENST00000524773 EBF2Q9HAK2 575 aa14.15□□□□□ -0.14
CAPN1-202ENST00000524773 METTL14Q9HCE5 456 aaKnown RBP14.15□□□□□ -0.14
CAPN1-202ENST00000524773 CHST7Q9NS84 486 aa14.15□□□□□ -0.14
CAPN1-202ENST00000524773 LRRC4BQ9NT99 713 aa14.15□□□□□ -0.14
CAPN1-202ENST00000524773 MTRF1LQ9UGC7 380 aaKnown RBP14.15□□□□□ -0.14
CAPN1-202ENST00000524773 LY75O60449 1722 aa14.15□□□□□ -0.14
CAPN1-202ENST00000524773 SMCHD1A6NHR9 2005 aa14.15□□□□□ -0.15
CAPN1-202ENST00000524773 ANKRD62A6NC57 917 aa14.14□□□□□ -0.15
CAPN1-202ENST00000524773 TP73O15350 636 aa14.14□□□□□ -0.15
CAPN1-202ENST00000524773 ADCY2Q08462 1091 aa14.14□□□□□ -0.15
CAPN1-202ENST00000524773 FOXR2Q6PJQ5 311 aa14.14□□□□□ -0.15
CAPN1-202ENST00000524773 KRT27Q7Z3Y8 459 aa14.14□□□□□ -0.15
CAPN1-202ENST00000524773 SLC47A2Q86VL8 602 aa14.14□□□□□ -0.15
CAPN1-202ENST00000524773 SYCP3Q8IZU3 236 aa14.14□□□□□ -0.15
CAPN1-202ENST00000524773 RPGRQ92834 1020 aaKnown RBP14.14□□□□□ -0.15
CAPN1-202ENST00000524773 C9orf72Q96LT7 481 aa14.14□□□□□ -0.15
CAPN1-202ENST00000524773 ARFGEF1Q9Y6D6 1849 aa14.14□□□□□ -0.15
CAPN1-202ENST00000524773 BRAFP15056 766 aa14.14□□□□□ -0.15
CAPN1-202ENST00000524773 GJC1P36383 396 aa14.14□□□□□ -0.15
CAPN1-202ENST00000524773 COILP38432 576 aaPredicted RBP14.14□□□□□ -0.15
CAPN1-202ENST00000524773 NPEPPSP55786 919 aa14.14□□□□□ -0.15
CAPN1-202ENST00000524773 MTM1Q13496 603 aa14.14□□□□□ -0.15
CAPN1-202ENST00000524773 TGS1Q96RS0 853 aaKnown RBP14.14□□□□□ -0.15
CAPN1-202ENST00000524773 DNAJC18Q9H819 358 aa14.14□□□□□ -0.15
CAPN1-202ENST00000524773 ADAM22Q9P0K1 906 aa14.14□□□□□ -0.15
CAPN1-202ENST00000524773 TTC7AQ9ULT0 858 aaPredicted RBP14.14□□□□□ -0.15
CAPN1-202ENST00000524773 EMSYQ7Z589 1322 aa14.14□□□□□ -0.15
CAPN1-202ENST00000524773 IGKV6D-41A0A0C4DH26 115 aa14.13□□□□□ -0.15
CAPN1-202ENST00000524773 FAM187AA6NFU0 413 aa14.13□□□□□ -0.15
CAPN1-202ENST00000524773 CYP26A1O43174 497 aa14.13□□□□□ -0.15
CAPN1-202ENST00000524773 PDE6CP51160 858 aa14.13□□□□□ -0.15
CAPN1-202ENST00000524773 COPS2P61201 443 aa14.13□□□□□ -0.15
CAPN1-202ENST00000524773 KRT17Q04695 432 aa14.13□□□□□ -0.15
CAPN1-202ENST00000524773 PPP3CAQ08209 521 aa14.13□□□□□ -0.15
CAPN1-202ENST00000524773 DHX34Q14147 1143 aaKnown RBP14.13□□□□□ -0.15
CAPN1-202ENST00000524773 ODR4Q5SWX8 454 aa14.13□□□□□ -0.15
CAPN1-202ENST00000524773 COL23A1Q86Y22 540 aaPredicted RBP14.13□□□□□ -0.15
CAPN1-202ENST00000524773 CERS5Q8N5B7 392 aa14.13□□□□□ -0.15
CAPN1-202ENST00000524773 MAGEC3Q8TD91 643 aa14.13□□□□□ -0.15
Retrieved 100 of 20,778 RNA–protein pairs in 19 ms