RNA–Protein interactions for RNA: ENST00000524534.5

PTPRK-217, Transcript of protein tyrosine phosphatase, receptor type K, humanhuman

TSL 5

Gene PTPRK, Length 2,441 nt, Biotype processed transcript, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRK-217ENST00000524534 EXOC3O60645 756 aa12.37□□□□□ -0.43
PTPRK-217ENST00000524534 RARAP10276 462 aa12.37□□□□□ -0.43
PTPRK-217ENST00000524534 TAL1P17542 331 aaPredicted RBP12.37□□□□□ -0.43
PTPRK-217ENST00000524534 SCNN1DP51172 638 aa12.37□□□□□ -0.43
PTPRK-217ENST00000524534 PPP2R5CQ13362 524 aa12.37□□□□□ -0.43
PTPRK-217ENST00000524534 CERKLQ49MI3 558 aaPredicted RBP12.37□□□□□ -0.43
PTPRK-217ENST00000524534 SYDE2Q5VT97 1194 aa12.37□□□□□ -0.43
PTPRK-217ENST00000524534 TRMT10CQ7L0Y3 403 aaKnown RBP12.37□□□□□ -0.43
PTPRK-217ENST00000524534 TBC1D1Q86TI0 1168 aaPredicted RBP12.37□□□□□ -0.43
PTPRK-217ENST00000524534 ARHGEF19Q8IW93 802 aa12.37□□□□□ -0.43
PTPRK-217ENST00000524534 CCDC105Q8IYK2 499 aa12.37□□□□□ -0.43
PTPRK-217ENST00000524534 TCP11Q8WWU5 503 aa12.37□□□□□ -0.43
PTPRK-217ENST00000524534 HOMER3Q9NSC5 361 aa12.37□□□□□ -0.43
PTPRK-217ENST00000524534 USP15Q9Y4E8 981 aaPredicted RBP12.37□□□□□ -0.43
PTPRK-217ENST00000524534 PASKQ96RG2 1323 aa12.37□□□□□ -0.43
PTPRK-217ENST00000524534 F5H6K3 240 aa12.37□□□□□ -0.43
PTPRK-217ENST00000524534 UBOX5O94941 541 aa12.37□□□□□ -0.43
PTPRK-217ENST00000524534 ALADP13716 330 aa12.37□□□□□ -0.43
PTPRK-217ENST00000524534 MUTP22033 750 aa12.37□□□□□ -0.43
PTPRK-217ENST00000524534 NCALDP61601 193 aa12.37□□□□□ -0.43
PTPRK-217ENST00000524534 MESDQ14696 234 aa12.37□□□□□ -0.43
PTPRK-217ENST00000524534 CCDC38Q502W7 563 aa12.37□□□□□ -0.43
PTPRK-217ENST00000524534 SLC30A10Q6XR72 485 aa12.37□□□□□ -0.43
PTPRK-217ENST00000524534 GMCL1P1Q8NEA9 526 aa12.37□□□□□ -0.43
PTPRK-217ENST00000524534 CCHCR1Q8TD31 782 aa12.37□□□□□ -0.43
PTPRK-217ENST00000524534 HOOK2Q96ED9 719 aa12.37□□□□□ -0.43
PTPRK-217ENST00000524534 GMCL1Q96IK5 515 aa12.37□□□□□ -0.43
PTPRK-217ENST00000524534 CRAMP1Q96RY5 1269 aa12.37□□□□□ -0.43
PTPRK-217ENST00000524534 PCDHB18PQ96TA0 734 aa12.37□□□□□ -0.43
PTPRK-217ENST00000524534 KCND2Q9NZV8 630 aa12.37□□□□□ -0.43
PTPRK-217ENST00000524534 MTUS1Q9ULD2 1270 aa12.37□□□□□ -0.43
PTPRK-217ENST00000524534 TP73O15350 636 aa12.36□□□□□ -0.43
PTPRK-217ENST00000524534 P4HA2O15460 535 aa12.36□□□□□ -0.43
PTPRK-217ENST00000524534 CLTAP09496 248 aa12.36□□□□□ -0.43
PTPRK-217ENST00000524534 GZMAP12544 262 aa12.36□□□□□ -0.43
PTPRK-217ENST00000524534 NQO1P15559 274 aaKnown RBP12.36□□□□□ -0.43
PTPRK-217ENST00000524534 CHRNB2P17787 502 aa12.36□□□□□ -0.43
PTPRK-217ENST00000524534 CRYMQ14894 314 aa12.36□□□□□ -0.43
PTPRK-217ENST00000524534 ACCSLQ4AC99 568 aa12.36□□□□□ -0.43
PTPRK-217ENST00000524534 ODR4Q5SWX8 454 aa12.36□□□□□ -0.43
PTPRK-217ENST00000524534 FAM196AQ6ZSG2 479 aa12.36□□□□□ -0.43
PTPRK-217ENST00000524534 SLC5A5Q92911 643 aa12.36□□□□□ -0.43
PTPRK-217ENST00000524534 TBC1D31Q96DN5 1066 aa12.36□□□□□ -0.43
PTPRK-217ENST00000524534 SERPINB12Q96P63 405 aa12.36□□□□□ -0.43
PTPRK-217ENST00000524534 CCDC113Q9H0I3 377 aa12.36□□□□□ -0.43
PTPRK-217ENST00000524534 LRRC19Q9H756 370 aa12.36□□□□□ -0.43
PTPRK-217ENST00000524534 AAASQ9NRG9 546 aa12.36□□□□□ -0.43
PTPRK-217ENST00000524534 EMSYQ7Z589 1322 aa12.36□□□□□ -0.43
PTPRK-217ENST00000524534 TAF1LQ8IZX4 1826 aa12.36□□□□□ -0.43
PTPRK-217ENST00000524534 FAM196BA6NMK8 535 aa12.36□□□□□ -0.43
PTPRK-217ENST00000524534 TULP1O00294 542 aaPredicted RBP12.36□□□□□ -0.43
PTPRK-217ENST00000524534 NDUFB10O96000 172 aa12.36□□□□□ -0.43
PTPRK-217ENST00000524534 SERPINB2P05120 415 aa12.36□□□□□ -0.43
PTPRK-217ENST00000524534 KCNJ1P48048 391 aa12.36□□□□□ -0.43
PTPRK-217ENST00000524534 DLG4P78352 724 aa12.36□□□□□ -0.43
PTPRK-217ENST00000524534 ICA1Q05084 483 aa12.36□□□□□ -0.43
PTPRK-217ENST00000524534 EPC2Q52LR7 807 aa12.36□□□□□ -0.43
PTPRK-217ENST00000524534 LRCH2Q5VUJ6 765 aa12.36□□□□□ -0.43
PTPRK-217ENST00000524534 VSTM1Q6UX27 236 aa12.36□□□□□ -0.43
PTPRK-217ENST00000524534 MIGA2Q7L4E1 593 aa12.36□□□□□ -0.43
PTPRK-217ENST00000524534 PNMA8AQ86V59 439 aaPredicted RBP12.36□□□□□ -0.43
PTPRK-217ENST00000524534 RDH13Q8NBN7 331 aa12.36□□□□□ -0.43
PTPRK-217ENST00000524534 BANK1Q8NDB2 785 aa12.36□□□□□ -0.43
PTPRK-217ENST00000524534 SLCO2A1Q92959 643 aa12.36□□□□□ -0.43
PTPRK-217ENST00000524534 TEKT1Q969V4 418 aa12.36□□□□□ -0.43
PTPRK-217ENST00000524534 NACC1Q96RE7 527 aa12.36□□□□□ -0.43
PTPRK-217ENST00000524534 CDC42EP4Q9H3Q1 356 aaKnown RBP12.36□□□□□ -0.43
PTPRK-217ENST00000524534 WRAP73Q9P2S5 460 aaPredicted RBP12.36□□□□□ -0.43
PTPRK-217ENST00000524534 CHORDC1Q9UHD1 332 aaPredicted RBP12.36□□□□□ -0.43
PTPRK-217ENST00000524534 PTPN22Q9Y2R2 807 aa12.36□□□□□ -0.43
PTPRK-217ENST00000524534 CHMP2AO43633 222 aa12.35□□□□□ -0.43
PTPRK-217ENST00000524534 ECEL1O95672 775 aa12.35□□□□□ -0.43
PTPRK-217ENST00000524534 SCP2P22307 547 aa12.35□□□□□ -0.43
PTPRK-217ENST00000524534 PRELPP51888 382 aa12.35□□□□□ -0.43
PTPRK-217ENST00000524534 PPP3CAQ08209 521 aa12.35□□□□□ -0.43
PTPRK-217ENST00000524534 BNIP1Q12981 228 aa12.35□□□□□ -0.43
PTPRK-217ENST00000524534 LONRF1Q17RB8 773 aa12.35□□□□□ -0.43
PTPRK-217ENST00000524534 ZNF746Q6NUN9 644 aaPredicted RBP12.35□□□□□ -0.43
PTPRK-217ENST00000524534 TATDN1Q6P1N9 297 aa12.35□□□□□ -0.43
PTPRK-217ENST00000524534 RHBDF2Q6PJF5 856 aa12.35□□□□□ -0.43
PTPRK-217ENST00000524534 INTS8Q75QN2 995 aaKnown RBP12.35□□□□□ -0.43
PTPRK-217ENST00000524534 SP8Q8IXZ3 490 aa12.35□□□□□ -0.43
PTPRK-217ENST00000524534 TMEM174Q8WUU8 243 aa12.35□□□□□ -0.43
PTPRK-217ENST00000524534 ARHGEF2Q92974 986 aaKnown RBP12.35□□□□□ -0.43
PTPRK-217ENST00000524534 STAMBPL1Q96FJ0 436 aa12.35□□□□□ -0.43
PTPRK-217ENST00000524534 DDX23Q9BUQ8 820 aaKnown RBP12.35□□□□□ -0.43
PTPRK-217ENST00000524534 WHRNQ9P202 907 aa12.35□□□□□ -0.43
PTPRK-217ENST00000524534 NOCTQ9UK39 431 aaKnown RBP12.35□□□□□ -0.43
PTPRK-217ENST00000524534 CD2APQ9Y5K6 639 aa12.35□□□□□ -0.43
PTPRK-217ENST00000524534 SIPA1L1O43166 1804 aa12.35□□□□□ -0.43
PTPRK-217ENST00000524534 LRRC37AA6NMS7 1700 aa12.35□□□□□ -0.43
PTPRK-217ENST00000524534 ADAMTSL1Q8N6G6 1762 aa12.35□□□□□ -0.43
PTPRK-217ENST00000524534 TMEM120BA0PK00 339 aa12.35□□□□□ -0.43
PTPRK-217ENST00000524534 DDTLA6NHG4 134 aaPredicted RBP12.35□□□□□ -0.43
PTPRK-217ENST00000524534 TCP11X1B4DZS4 312 aa12.35□□□□□ -0.43
PTPRK-217ENST00000524534 CYP1A2P05177 515 aa12.35□□□□□ -0.43
PTPRK-217ENST00000524534 PSEN1P49768 467 aa12.35□□□□□ -0.43
PTPRK-217ENST00000524534 KCNJ2P63252 427 aa12.35□□□□□ -0.43
PTPRK-217ENST00000524534 CETN1Q12798 172 aa12.35□□□□□ -0.43
PTPRK-217ENST00000524534 CALCOCO2Q13137 446 aa12.35□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 35.6 ms